Predicted mutation
evidence seq id position mutation annotation gene description
MC JC CP009974 1,303,424 Δ2,602 bp ISS12‑mediated RPPX_05775–RPPX_05780 RPPX_05775, RPPX_05780

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ CP009974 1303424–1306018 1306025 8–2602 282 [0] [0] 281 RPPX_05775–RPPX_05780 RPPX_05775,RPPX_05780

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? CP009974 = 13034230 (0.000)270 (0.870) 160/284 1.0 100% noncoding (1/2595 nt) ISS12 repeat region
?CP009974 1306026 = 0 (0.000)intergenic (+114/+104) RPPX_05780/RPPX_05785 ATPase AAA/hypothetical protein

Only 100 of 281 total aligned reads displayed.

GACGCAGAAATTGACGACGCCAGCCAACCCGGACTAACAATGCCACCCCTGCGTCGCTGCGCTCCGACTGCCTGTCCGAATGAGCGTGGAACAGGTGTCCGGATCAGCGTGGGCTGAGTGTCCGAATGGCGTGGAATCCGCATCTGTGTGAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTAACCCATGCAGAACGCCGAG  >  CP009974/1305876‑1306175
                                                                                                                                                      |                                                                                                                                                     
ccagccctggcctcggtattgagctgatgcaggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtga                                                                                                                                                       <  1:2292820‑M2/1‑1 (MQ=255)
ccagccctggcctcggtattgagctgatgcaggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtga                                                                                                                                                       <  1:1370818‑M2/1‑1 (MQ=255)
     cctggcctcggtattgagctgatgcaggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCggg                                                                                                                                                  <  1:4127605‑M2/6‑1 (MQ=255)
       tggcctcggtattgagctgatgcaggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCg                                                                                                                                                >  2:4449364‑M2/144‑151 (MQ=255)
        ggcctcggtattgagctgatgcaggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGt                                                                                                                                               >  2:3431485‑M2/143‑151 (MQ=255)
           ctcggtattgagctgatgcaggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGcc                                                                                                                                            <  2:3681748‑M2/12‑1 (MQ=255)
            tcggtattgagctgatgcaggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGccc                                                                                                                                           <  2:822367‑M2/13‑1 (MQ=255)
            tcgggattgagctgatgcaggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGccc                                                                                                                                           <  1:641655‑M2/13‑1 (MQ=255)
             cggtattgtgcacatgcaagttcatgagagcacctcgcgatggaaaccacgaaggagagctcattttttgtacagaaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCcg                                                                                                                                          <  2:3209208‑M2/14‑1 (MQ=255)
              ggtattgagctgatgcaggttcaggagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCcgc                                                                                                                                         <  1:5137235‑M2/15‑1 (MQ=255)
                 tttgaggtgatgctggttcttgaggggacctcgcgatgtgaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGaa                                                                                                                                      <  2:3275370‑M2/18‑1 (MQ=255)
                 attgagctgatgcaggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGaa                                                                                                                                      <  1:2781731‑M2/18‑1 (MQ=255)
                  ttgagctgatgcaggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgccagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAg                                                                                                                                     <  2:5089653‑M2/19‑1 (MQ=255)
                    gagctgatgcaggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAgcc                                                                                                                                   >  2:5431293‑M2/131‑150 (MQ=255)
                        tgatgcaggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGcc                                                                                                                               >  2:3585012‑M2/127‑151 (MQ=255)
                             caggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCAcgcg                                                                                                                          >  2:3120871‑M2/122‑151 (MQ=255)
                             caggttcatgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCAcgcg                                                                                                                          >  1:5659541‑M2/122‑151 (MQ=255)
                                   catgagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGtggct                                                                                                                    >  2:3786681‑M2/116‑151 (MQ=255)
                                      gagagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGtggctggc                                                                                                                 >  1:5527697‑M2/113‑151 (MQ=255)
                                       agagcacctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCa                                                                                                                <  2:5832136‑M2/40‑1 (MQ=255)
                                           cacctcgcgatgggaaccacgcatgagagctcattttttgtatagtaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCCCCgg                                                                                                            >  2:2111617‑M2/108‑151 (MQ=255)
                                              ctcgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCtt                                                                                                         <  2:1995982‑M2/47‑1 (MQ=255)
                                               tggcgatgggaaccactcatgagtgctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCttt                                                                                                        <  2:1003123‑M2/48‑1 (MQ=255)
                                                cgcgatgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTg                                                                                                       <  1:905566‑M2/49‑1 (MQ=255)
                                                 gcgatgagaaccacgcatgagagctcattttttgtacaggaagcgagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGc                                                                                                      <  2:741171‑M2/50‑1 (MQ=255)
                                                    atgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCgg                                                                                                   >  2:2357337‑M2/99‑151 (MQ=255)
                                                    atgggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTAGCACCGGCTTTGCCgg                                                                                                   >  2:5427678‑M2/99‑151 (MQ=255)
                                                      gggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGgtg                                                                                                 <  2:461035‑M2/55‑1 (MQ=255)
                                                      gggaaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGgtg                                                                                                 <  2:2272723‑M2/55‑1 (MQ=255)
                                                         aaccacgcatgagagctcattttttgtttaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTc                                                                                              >  2:5544791‑M2/94‑151 (MQ=255)
                                                         aaccacgcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccgctcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTc                                                                                              <  2:3974340‑M2/58‑1 (MQ=255)
                                                               gcatgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGGTCGCGGGc                                                                                        >  2:4280501‑M2/88‑151 (MQ=255)
                                                                 atgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCAt                                                                                      >  1:288991‑M2/86‑151 (MQ=255)
                                                                 atgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCAt                                                                                      <  1:3897615‑M2/66‑1 (MQ=255)
                                                                  tgagagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATg                                                                                     <  1:2546364‑M2/67‑1 (MQ=255)
                                                                    agagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGcc                                                                                   >  1:5454655‑M2/83‑151 (MQ=255)
                                                                     gagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGccc                                                                                  <  1:1079215‑M2/70‑1 (MQ=255)
                                                                     aagctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGccc                                                                                  <  1:669515‑M2/70‑1 (MQ=255)
                                                                      agctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCg                                                                                 >  1:3098865‑M2/81‑151 (MQ=255)
                                                                      agctcattttttgcacagggagagagaatgcgcaaggcatgactgacgccgctcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCg                                                                                 <  2:4572541‑M2/71‑1 (MQ=255)
                                                                       gctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGc                                                                                <  1:4449364‑M2/72‑1 (MQ=255)
                                                                       gctcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGc                                                                                <  2:50843‑M2/72‑1 (MQ=255)
                                                                       gctcattttttgtaaaggaagggagaatgcggaaggcttgactgacgcctctcgtccgttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCTCCGGCTTTGCCGGTGTTCGCGGGCATGCCCGc                                                                                <  2:1380351‑M2/72‑1 (MQ=255)
                                                                         tcattttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTc                                                                              >  1:3967227‑M2/78‑151 (MQ=255)
                                                                           attttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTccc                                                                            <  1:5510438‑M2/76‑1 (MQ=255)
                                                                            ttttttgtacaggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCca                                                                           <  2:6205656‑M2/77‑1 (MQ=255)
                                                                                    actggaagggagaatgcgcagggcatgcctggcgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGtt                                                                   <  2:2145939‑M2/85‑1 (MQ=255)
                                                                                    aaaggaagagagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGtt                                                                   <  1:1411563‑M2/85‑1 (MQ=255)
                                                                                      aggaagggagaatgcgcaaggcatgactaacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGc                                                                 <  1:2655656‑M2/87‑1 (MQ=255)
                                                                                       ggaaggtagaatgcgcaaggcatgactgacgccactcttcagttgaacctcgatcgctgtgtgAGCGGGCGTGCCCGCGAAGGAGGCCACGCGGGGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGACCGCTCCCACAGGAGTTGCa                                                                >  1:800937‑M2/64‑151 (MQ=255)
                                                                                       ggaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCa                                                                >  1:6389824‑M2/64‑151 (MQ=255)
                                                                                        gaagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAg                                                               <  1:1863074‑M2/89‑1 (MQ=255)
                                                                                         aagggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGTCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGGTGCaga                                                              >  2:566487‑M2/62‑150 (MQ=255)
                                                                                          agggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCCCAGGAGTTGCAGTg                                                             >  2:2745691‑M2/61‑151 (MQ=255)
                                                                                          agggagaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTg                                                             >  1:3487718‑M2/61‑151 (MQ=255)
                                                                                              agaatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGc                                                         <  1:3192636‑M2/95‑1 (MQ=255)
                                                                                                aatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCt                                                       <  1:4022651‑M2/97‑1 (MQ=255)
                                                                                                aatgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCt                                                       >  1:2425900‑M2/55‑151 (MQ=255)
                                                                                                  tgcgcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTgg                                                     <  2:2846570‑M2/99‑1 (MQ=255)
                                                                                                     gcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCgg                                                  >  2:1052687‑M2/50‑151 (MQ=255)
                                                                                                     gcaaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCgg                                                  >  1:1510425‑M2/50‑151 (MQ=255)
                                                                                                      caaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGGTGCAGTGAGGCCTggagga                                                 >  2:4199015‑M2/49‑151 (MQ=255)
                                                                                                      caaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGGGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGa                                                 >  1:5860944‑M2/49‑151 (MQ=255)
                                                                                                      caaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGCGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGCGGCCTGGCGGa                                                 >  1:4887614‑M2/49‑151 (MQ=255)
                                                                                                       aaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACCGGAGTTGCCCTGAGGCCTGGCGGAc                                                >  2:4058684‑M2/48‑151 (MQ=255)
                                                                                                       aaggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGAc                                                >  2:4394196‑M2/48‑151 (MQ=255)
                                                                                                        aggcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACt                                               <  1:4708591‑M2/105‑1 (MQ=255)
                                                                                                          gcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCa                                             <  2:4777607‑M2/107‑1 (MQ=255)
                                                                                                          gcatgactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCa                                             >  1:2318062‑M2/45‑151 (MQ=255)
                                                                                                              gactgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTGCCACAGGAGCTGCAGTGAGGCCTGGCGGACTCTGTGc                                         >  1:4258573‑M2/41‑151 (MQ=255)
                                                                                                               actgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCt                                        <  2:5934336‑M2/112‑1 (MQ=255)
                                                                                                               actgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCt                                        >  1:213800‑M2/40‑151 (MQ=255)
                                                                                                                ctgacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCtt                                       <  2:802870‑M2/113‑1 (MQ=255)
                                                                                                                 ggacgccactcgtcggttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTg                                      <  2:6331319‑M2/114‑1 (MQ=255)
                                                                                                                  gacgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTgg                                     <  2:1520898‑M2/115‑1 (MQ=255)
                                                                                                                   acgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGt                                    >  2:4991171‑M2/36‑151 (MQ=255)
                                                                                                                    cgccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTc                                   >  1:720718‑M2/35‑151 (MQ=255)
                                                                                                                     gccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCa                                  >  1:3303959‑M2/34‑151 (MQ=255)
                                                                                                                     gccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGGTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCa                                  >  1:3818042‑M2/34‑151 (MQ=255)
                                                                                                                      ccactcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAg                                 <  2:247840‑M2/119‑1 (MQ=255)
                                                                                                                        agtcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCt                               <  2:1875292‑M2/121‑1 (MQ=255)
                                                                                                                        actcgtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACCCAGTGCTTGGTCATCt                               >  2:5256801‑M2/31‑151 (MQ=255)
                                                                                                                            gtcagttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTc                           <  1:4355875‑M2/125‑1 (MQ=255)
                                                                                                                               agttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAg                        >  1:4577902‑M2/24‑151 (MQ=255)
                                                                                                                                 ttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGt                      <  1:5181082‑M2/130‑1 (MQ=255)
                                                                                                                                 ttgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGt                      >  1:2005064‑M2/22‑151 (MQ=255)
                                                                                                                                  tgaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTa                     <  1:342290‑M2/131‑1 (MQ=255)
                                                                                                                                   gaacctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACCCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCCCCCACAGGAGATCCAGTGAGGCCTGGCGCACTCAGTGGTTGGTCAGCTTGTCCCGGTaa                    >  2:3487013‑M2/20‑151 (MQ=255)
                                                                                                                                    aacctcgatcgctgtgtgGGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTAAc                   <  2:4903924‑M2/133‑1 (MQ=255)
                                                                                                                                     acctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTAAcc                  <  1:1018317‑M2/134‑1 (MQ=255)
                                                                                                                                      cctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTAAccc                 <  1:5477501‑M2/135‑1 (MQ=255)
                                                                                                                                      cctcgatctctgtgtgAGCGGGCGTGCACGAGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTAAccc                 <  1:1007319‑M2/135‑1 (MQ=255)
                                                                                                                                       ctcgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTAACCCa                >  1:4824716‑M2/16‑151 (MQ=255)
                                                                                                                                         cgatctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTAACCCATg              <  2:5183355‑M2/138‑1 (MQ=255)
                                                                                                                                           atctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCCCAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTAACCCATGCa            >  2:6512643‑M2/12‑151 (MQ=255)
                                                                                                                                            tctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCCGGTAACCCATGCAg           >  2:2593792‑M2/11‑151 (MQ=255)
                                                                                                                                            tctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTAACCCATGCAg           >  1:3618109‑M2/11‑151 (MQ=255)
                                                                                                                                             ctctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTAACCCATGCAGa          >  1:1247832‑M2/10‑151 (MQ=255)
                                                                                                                                              tctgtgtgAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTAACCCATGCAGaa         >  1:3230158‑M2/9‑151 (MQ=255)
                                                                                                                                                    ggAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTAACCCATGCAGAACGCAga   <  2:3522943‑M2/149‑1 (MQ=255)
                                                                                                                                                      |                                                                                                                                                     
GACGCAGAAATTGACGACGCCAGCCAACCCGGACTAACAATGCCACCCCTGCGTCGCTGCGCTCCGACTGCCTGTCCGAATGAGCGTGGAACAGGTGTCCGGATCAGCGTGGGCTGAGTGTCCGAATGGCGTGGAATCCGCATCTGTGTGAGCGGGCGTGCCCGCGAAGCAGGCCACGCGGTGGCTGGCACCGGCTTTGCCGGTGTTCGCGGGCATGCCCGCTCCCACAGGAGTTGCAGTGAGGCCTGGCGGACTCAGTGCTTGGTCAGCTTGTCCAGGTAACCCATGCAGAACGCCGAG  >  CP009974/1305876‑1306175

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑