Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009974769,8050TC71.5% 144.1 / 125.5 195intergenic (‑227/+241)RPPX_03350/RPPX_03355acetolactate synthase/5S ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base T (35/20);  new base C (80/58);  total (116/79)
Fisher's exact test for biased strand distribution p-value = 5.18e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.96e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 195 total aligned reads displayed.

CAAAAGTGCCCCGAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTACCC  >  CP009974/769660‑769953
                                                                                                                                                 |                                                                                                                                                    
cAAAAGTGCCCCGAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGGCAATTCCCAc                                                                                                                                                 >  1:2221306/1‑151 (MQ=255)
     gTGCCCCGAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCGTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACctgcc                                                                                                                                            >  2:1027253/1‑151 (MQ=255)
      tGCCCCGAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACctgccc                                                                                                                                           >  2:2265879/1‑150 (MQ=255)
         cccGAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACctgccgttc                                                                                                                                        >  1:513061/1‑148 (MQ=255)
             aaCCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCCGCCGCTCAcca                                                                                                                                    >  2:2374914/1‑150 (MQ=255)
               ccAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCAccatt                                                                                                                                  >  1:105058/1‑148 (MQ=37)
               ccAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCAccatt                                                                                                                                  <  2:43576/151‑4 (MQ=37)
                  aaGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCAccattgcc                                                                                                                               <  1:1278636/151‑7 (MQ=37)
                     tCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCcccc                                                                                                                            >  2:5551070/1‑151 (MQ=25)
                      cTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGccgccg                                                                                                                           >  2:1592369/1‑151 (MQ=25)
                         gACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCcgccgccc                                                                                                                        >  1:4270977/1‑149 (MQ=25)
                           cGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCAcc                                                                                                                      >  2:4823316/1‑151 (MQ=21)
                           cGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCAcc                                                                                                                      >  1:4367192/1‑151 (MQ=21)
                            gTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCg                                                                                                                     <  1:2730182/151‑1 (MQ=21)
                            gTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCg                                                                                                                     >  1:3054450/1‑151 (MQ=21)
                            gTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAACCCCCACCTGCCGTTCACCATTGCCGCCCCCACCg                                                                                                                     >  1:2462271/1‑151 (MQ=21)
                             tAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGt                                                                                                                    >  1:3646852/1‑151 (MQ=21)
                             tAGGGGGGGGGCGGGAAAGGCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTGGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGGCTGGCCAAGCCCCACCTGCCGTCCACCATGGCCGCCCCCACCgc                                                                                                                    >  2:1784307/1‑150 (MQ=21)
                                 gggggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTc                                                                                                                <  2:930801/151‑1 (MQ=18)
                                 gggggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACACTTGCCGCCGCCACCGTATTc                                                                                                                >  2:1879976/1‑151 (MQ=21)
                                   gggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTcgc                                                                                                              <  2:1675894/151‑1 (MQ=18)
                                   gggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTcgc                                                                                                              <  1:4390322/151‑1 (MQ=18)
                                    ggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTcgcg                                                                                                             <  1:1027253/151‑1 (MQ=18)
                                    ggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTcgcg                                                                                                             >  1:500105/1‑151 (MQ=18)
                                    ggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTACTcgcg                                                                                                             >  2:4900862/1‑151 (MQ=21)
                                     gggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCgg                                                                                                            <  1:2825459/151‑1 (MQ=18)
                                      ggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCggg                                                                                                           <  2:692026/151‑1 (MQ=18)
                                        cGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTa                                                                                                         >  2:3580866/1‑151 (MQ=18)
                                        cGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTa                                                                                                         <  1:5350206/151‑1 (MQ=18)
                                        cGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGAGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTa                                                                                                         >  1:4927644/1‑151 (MQ=18)
                                         gggAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTaa                                                                                                        >  1:2607645/1‑151 (MQ=18)
                                         gggAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCACTGCCGCCGCCACCGTATTCGCGGGTaa                                                                                                        >  2:5192930/1‑151 (MQ=18)
                                          ggAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTaaa                                                                                                       <  2:5749778/151‑1 (MQ=18)
                                           gAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAAc                                                                                                      >  1:5336038/1‑151 (MQ=18)
                                            aaaGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCAcc                                                                                                                                     >  1:3155999/1‑119 (MQ=25)
                                            aaaGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCAcc                                                                                                                                     <  2:3155999/119‑1 (MQ=25)
                                              aGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAAccgg                                                                                                   >  2:3721281/1‑149 (MQ=255)
                                              aGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAACAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTCCACCATTGCCACCCCCACCGTATTCCCGCGTAAAcacc                                                                                                   >  2:3348883/1‑148 (MQ=18)
                                                tCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCACTCCCCACCCGCCGTTCACCGTTGCCTCCGCCACCCTATTCGCGGGTAAACCCGCt                                                                                                 >  2:3769270/1‑151 (MQ=18)
                                                tCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTAt                                                                                                                  >  2:3389870/1‑134 (MQ=18)
                                                tCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTAt                                                                                                                  <  1:3389870/134‑1 (MQ=17)
                                                tCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCAACCGTATTCTCGGGTAAACCCGcc                                                                                                 >  1:1575079/1‑150 (MQ=18)
                                                tCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGCTCACCATCGCCGCCGCCCCCGTGTTCGCCGGGAAGCCCGcg                                                                                                 >  2:4107919/1‑150 (MQ=21)
                                                 cACGTTAATGCTTGGTGGAGTCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCTTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgc                                                                                                <  2:5472843/151‑3 (MQ=17)
                                                 cACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgc                                                                                                >  2:6232608/1‑149 (MQ=17)
                                                 cACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgc                                                                                                >  1:6493693/1‑149 (MQ=17)
                                                 cACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCCGGTCAACCCGcgc                                                                                                >  1:4767904/1‑149 (MQ=17)
                                                  aCGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgca                                                                                               <  1:53473/151‑4 (MQ=17)
                                                  aCGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgca                                                                                               <  1:4443176/151‑4 (MQ=17)
                                                  aCGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgca                                                                                               <  1:1129570/151‑4 (MQ=17)
                                                  aCGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCAACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgca                                                                                               >  2:5271325/1‑148 (MQ=17)
                                                   cGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgcat                                                                                              <  1:166554/151‑5 (MQ=17)
                                                      tAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATaca                                                                                           <  1:1857940/151‑1 (MQ=17)
                                                       aaTGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATacac                                                                                          <  2:2317032/151‑1 (MQ=17)
                                                       aaTGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATacac                                                                                          <  2:1305891/151‑1 (MQ=14)
                                                       aaTGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCCCCTacac                                                                                          >  2:6147121/1‑151 (MQ=17)
                                                         tGCTTCGGGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAg                                                                                        <  2:4427393/151‑1 (MQ=14)
                                                          gCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGa                                                                                       >  1:3140204/1‑151 (MQ=17)
                                                           cTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGAt                                                                                      <  2:1056357/151‑1 (MQ=14)
                                                             tCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGGGGGTGAACCCGCGCATACCCAGATtg                                                                                    >  1:4060678/1‑151 (MQ=17)
                                                              cGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGATtgg                                                                                   <  2:4867683/151‑1 (MQ=14)
                                                               gTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAAc                                                                                                      >  2:5051889/1‑131 (MQ=14)
                                                                tGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAACACGGCCGCCGCCCGTGCCAACCCCCACCAGCCGATCACCATCGCGGCCGCCACCGGAGTCGCTCGCAGACGCGCCCCTACACAGAtaagaa                                                                                 >  2:526332/1‑146 (MQ=12)
                                                                  gAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGGAAACCCGCCCAGACACAGATtggtggt                                                                               >  1:6127934/1‑151 (MQ=14)
                                                                  gAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGCTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGCTtggggga                                                                               >  2:28646/1‑150 (MQ=17)
                                                                     gCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGCGCGGGTTTACCCGCGAAGACGCCGGCCCCCCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTCTTCCCGGGTAAATCCGCGGGTACACCGATtcgtggtggg                                                                            >  2:257579/1‑150 (MQ=16)
                                                                     gCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGATTGGTGGTGGa                                                                            >  1:3894075/1‑151 (MQ=14)
                                                                      ccATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGTGTACACACGCGCATACACAGCTTGGTGGTGGac                                                                           >  1:1461633/1‑151 (MQ=14)
                                                                       cATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGATTGGTGGTGGaca                                                                          <  1:2356469/151‑1 (MQ=11)
                                                                        aTTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGATTGGTGGTGGacac                                                                         <  2:393096/151‑1 (MQ=11)
                                                                         ttCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGATTGGTGGTGGacacg                                                                        >  1:685479/1‑150 (MQ=11)
                                                                           cTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAGGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGATTGGTGGTGGacacgta                                                                      <  1:1982509/151‑4 (MQ=11)
                                                                           cTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAACAGGCCGGCCCTGCTGGCCAACCCCCACCTGCCGGTCACCATTGCCACCGCCACCGTATCCGCGGCTAAACACGCGCCCACACAGATTCGTGGTCGacacgtc                                                                      >  2:4405093/1‑148 (MQ=14)
                                                                                     gTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCGTGCTGGCAAGTGCCCACCGGCCGGACAGCATTTCCGTCGCGACCGTAGTCGCGGGTATAACCACACATACACAGATTGGTGGTGAATACCTATCGAGGGTTg                                                            >  2:418175/1‑151 (MQ=2)
                                                                                             ggccgtcgTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTACACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGAAACAgg                                                    >  1:3311414/8‑151 (MQ=255)
                                                                                             ggccgtcgTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAgg                                                    >  1:5428710/8‑151 (MQ=255)
                                                                                             ggccgtcgTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAgg                                                    >  1:5697386/8‑151 (MQ=255)
                                                                                                cgtcgTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACACGCTCCTACACAGATTGGTGGGGGACACACATCGGGGGCTGGACACAGGccc                                                 >  2:5770150/5‑150 (MQ=255)
                                                                                                  tcgTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCAtt                                               >  1:1057494/3‑151 (MQ=255)
                                                                                                  tcgTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGAGGGTTGGACACAGGCCAtt                                               >  1:94616/3‑151 (MQ=255)
                                                                                                   cgTAGGAGCGGGTTTCCCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTg                                              <  1:6147121/150‑1 (MQ=255)
                                                                                                                   ccggcgAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTAcc                              <  2:1208323/148‑1 (MQ=255)
                                                                                                                          agagGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAAc                       >  1:3228805/1‑151 (MQ=255)
                                                                                                                          agagGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGCTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAAc                       >  1:4518815/1‑151 (MQ=255)
                                                                                                                             ggccggcgCTGCTGGCCAATTCCCACCCGCCGCTCACCGTCGCCAGCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCt                    <  2:1792771/151‑1 (MQ=255)
                                                                                                                             ggcccgccCGGCTCGCCCATTTTCCCCCCCCCCGCACCCTCCCCACCGCCCCCGGTTTCCCGGGTAAACCCGGTCCTACACAGGTTGGGGGGGGACACAGATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCt                    <  2:1551854/151‑1 (MQ=12)
                                                                                                                                 ggccCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAg                >  2:4667260/1‑151 (MQ=255)
                                                                                                                                   cccGGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGa              <  1:2453465/151‑1 (MQ=255)
                                                                                                                                     ctgctgGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGc            >  1:227998/1‑151 (MQ=255)
                                                                                                                                      tgctgGCCAATTTCCCCCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCg           <  1:3160694/151‑1 (MQ=255)
                                                                                                                                       gctgGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCgg          >  1:5618968/1‑151 (MQ=255)
                                                                                                                                       gctgGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCgg          >  1:6331525/1‑151 (MQ=255)
                                                                                                                                       gctgGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCgg          >  1:2068259/1‑151 (MQ=255)
                                                                                                                                       gctgGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCgg          >  2:1962575/1‑151 (MQ=255)
                                                                                                                                            ccAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGTTGGACACACATCGGGGCTTGGACACAGGCCATTGTAGGAGCAGGTTCACCAGCGACCCCTGTCGGACCggtcgta     >  2:2091299/1‑146 (MQ=17)
                                                                                                                                            ccAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTa     <  2:2483150/151‑1 (MQ=255)
                                                                                                                                            ccAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTa     <  1:3731411/151‑1 (MQ=255)
                                                                                                                                             cAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGGTTAc    >  2:4031338/1‑151 (MQ=255)
                                                                                                                                              aaTTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTAcc   >  2:4214137/1‑151 (MQ=255)
                                                                                                                                              aaTTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGCGTAAACCCGCTCCTACACAGCTCCGTGGTGGACACACACCGGGGGTTGTACACAGGCCACTGTAGGAGCGGGTTTACCCCCGACCCCTGTACGCGCGGGTTTAcc   >  2:848243/1‑151 (MQ=255)
                                                                                                                                                 |                                                                                                                                                    
CAAAAGTGCCCCGAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTACCC  >  CP009974/769660‑769953

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑