Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009974769,8060TC72.8% 155.6 / 128.7 195intergenic (‑228/+240)RPPX_03350/RPPX_03355acetolactate synthase/5S ribosomal RNA
Reads supporting (aligned to +/- strand):  ref base T (36/17);  new base C (80/62);  total (116/79)
Fisher's exact test for biased strand distribution p-value = 1.89e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 199 total aligned reads displayed.

CAAAAGTGCCCCGAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTACCCGCG  >  CP009974/769660‑769956
                                                                                                                                                  |                                                                                                                                                      
cAAAAGTGCCCCGAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGGCAATTCCCAc                                                                                                                                                    >  1:2221306/1‑151 (MQ=255)
      tGCCCCGAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCTCctgccg                                                                                                                                              >  2:4027885/1‑151 (MQ=255)
       gCCCCGAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACctgccgt                                                                                                                                             >  1:3726808/1‑150 (MQ=255)
         cccGAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACctgccgttc                                                                                                                                           >  1:513061/1‑148 (MQ=255)
          ccGAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCa                                                                                                                                          >  2:2134289/1‑151 (MQ=255)
            gAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCAcc                                                                                                                                        >  1:3231311/1‑151 (MQ=255)
               ccAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCAccatt                                                                                                                                     <  2:1432987/151‑4 (MQ=37)
               ccAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCAccatt                                                                                                                                     >  1:443332/1‑148 (MQ=255)
               ccAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCAccatt                                                                                                                                     >  1:105058/1‑148 (MQ=37)
                  aaGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCAccattgcc                                                                                                                                  <  1:1278636/151‑7 (MQ=37)
                     tCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCcccc                                                                                                                               >  2:5551070/1‑151 (MQ=25)
                      cTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGccgccg                                                                                                                              >  1:4265227/1‑151 (MQ=25)
                           ggtggggggggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCAcc                                                                                                                         <  2:1053175/147‑1 (MQ=21)
                           cGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCAcc                                                                                                                         <  2:1246163/151‑1 (MQ=21)
                           cGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCAcc                                                                                                                         >  2:4823316/1‑151 (MQ=21)
                            gTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCg                                                                                                                        <  1:2730182/151‑1 (MQ=21)
                            gTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCg                                                                                                                        >  1:3054450/1‑151 (MQ=21)
                            gTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAACCCCCACCTGCCGTTCACCATTGCCGCCCCCACCg                                                                                                                        >  1:2462271/1‑151 (MQ=21)
                             tAGGGGGGGGGCGGGAAAGGCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTGGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCGGCTGGCCAAGCCCCACCTGCCGTCCACCATGGCCGCCCCCACCgc                                                                                                                       >  2:1784307/1‑150 (MQ=21)
                             gaGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGt                                                                                                                       <  1:4054370/150‑1 (MQ=21)
                                ggggggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTAtt                                                                                                                    <  1:5409647/151‑1 (MQ=18)
                                 gggggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTc                                                                                                                   <  2:930801/151‑1 (MQ=18)
                                 gggggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACACTTGCCGCCGCCACCGTATTc                                                                                                                   >  2:1879976/1‑151 (MQ=21)
                                  ggggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTcg                                                                                                                  <  1:3635519/151‑1 (MQ=18)
                                   gggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTcgc                                                                                                                 <  2:1675894/151‑1 (MQ=18)
                                    ggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTcgcg                                                                                                                <  1:1027253/151‑1 (MQ=18)
                                    ggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTcgcg                                                                                                                >  1:500105/1‑151 (MQ=18)
                                    ggggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTACTcgcg                                                                                                                >  2:4900862/1‑151 (MQ=21)
                                     gggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCgg                                                                                                               <  1:2825459/151‑1 (MQ=18)
                                     gggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCgg                                                                                                               <  1:3734210/151‑1 (MQ=18)
                                      ggCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCggg                                                                                                              <  2:692026/151‑1 (MQ=18)
                                       gCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGt                                                                                                             <  2:353229/151‑1 (MQ=18)
                                         gggAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTaa                                                                                                           >  1:2607645/1‑151 (MQ=18)
                                         gggAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCACTGCCGCCGCCACCGTATTCGCGGGTaa                                                                                                           >  2:5192930/1‑151 (MQ=18)
                                          ggAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTaaa                                                                                                          <  2:5749778/151‑1 (MQ=18)
                                          ggAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTaaa                                                                                                          <  2:3297459/151‑1 (MQ=18)
                                           taaaGGCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTTGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAAc                                                                                                         <  2:3367975/150‑1 (MQ=17)
                                           gAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAAc                                                                                                         >  1:5336038/1‑151 (MQ=18)
                                              aGTCATGTTAAAGATTCGTGGAGGCCATTCTAGCCGGGCGTCGGACCATCCTATGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGACGCCACCGTATTCGCGGGTAAACCCg                                                                                                      <  2:2745942/151‑1 (MQ=14)
                                                tCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCAACCGTATTCTCGGGTAAACCCGcc                                                                                                    >  1:1575079/1‑150 (MQ=18)
                                                 cccGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgc                                                                                                   <  2:2051173/149‑3 (MQ=17)
                                                 cACGTTAATGCTTGGTGGAGTCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCTTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgc                                                                                                   <  2:5472843/151‑3 (MQ=17)
                                                 cACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgc                                                                                                   >  2:6232608/1‑149 (MQ=17)
                                                 cACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgc                                                                                                   >  1:6493693/1‑149 (MQ=17)
                                                 cACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgc                                                                                                   >  1:4768441/1‑149 (MQ=17)
                                                  aCGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgca                                                                                                  <  1:53473/151‑4 (MQ=17)
                                                  aCGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgca                                                                                                  <  1:1129570/151‑4 (MQ=17)
                                                  aCGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCAACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgca                                                                                                  >  2:5271325/1‑148 (MQ=17)
                                                   cGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGcgcat                                                                                                 <  1:166554/151‑5 (MQ=17)
                                                      tAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATaca                                                                                              <  1:1857940/151‑1 (MQ=17)
                                                       aaTGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCCCCTacac                                                                                             >  2:6147121/1‑151 (MQ=17)
                                                         tGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAg                                                                                           <  2:433220/151‑1 (MQ=14)
                                                         tGCTTCGGGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAg                                                                                           <  2:4427393/151‑1 (MQ=14)
                                                          gCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGa                                                                                          >  1:3140204/1‑151 (MQ=17)
                                                             tCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGATtg                                                                                       <  2:1556441/151‑1 (MQ=14)
                                                              cGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGATtgg                                                                                      <  2:4867683/151‑1 (MQ=14)
                                                               gTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAAc                                                                                                         >  2:5051889/1‑131 (MQ=14)
                                                                tGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAACACGGCCGCCGCCCGTGCCAACCCCCACCAGCCGATCACCATCGCGGCCGCCACCGGAGTCGCTCGCAGACGCGCCCCTACACAGAtaagaa                                                                                    >  2:526332/1‑146 (MQ=12)
                                                                 ggAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCATCGTATTCGCGGGTAACCCCGCGCATACACAGAGtggtgg                                                                                   >  1:5467664/1‑151 (MQ=14)
                                                                  gAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGGAAACCCGCCCAGACACAGATtggtggt                                                                                  >  1:6127934/1‑151 (MQ=14)
                                                                     gCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGATTGGTGGTGGa                                                                               <  2:2562038/151‑1 (MQ=14)
                                                                      ccATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGTGTACACACGCGCATACACAGCTTGGTGGTGGac                                                                              >  1:1461633/1‑151 (MQ=14)
                                                                       cATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGATTGGTGGTGGaca                                                                             <  1:2356469/151‑1 (MQ=11)
                                                                         ttCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGATTGGTGGTGGacacg                                                                           >  1:685479/1‑150 (MQ=11)
                                                                           cTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAGGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCATACACAGATTGGTGGTGGacacgta                                                                         <  1:1982509/151‑4 (MQ=11)
                                                                           cTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAACAGGCCGGCCCTGCTGGCCAACCCCCACCTGCCGGTCACCATTGCCACCGCCACCGTATCCGCGGCTAAACACGCGCCCACACAGATTCGTGGTCGacacgtc                                                                         >  2:4405093/1‑148 (MQ=14)
                                                                              gCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGTTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACGCGCGCCGACACAGATTGGAGGTGGGCACGTATCg                                                                      >  2:1616950/1‑151 (MQ=11)
                                                                                   gCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGCTCACCATTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCGCCTACACAGATTTGTGGTGGACACACATCGAGGGt                                                                 >  1:3165656/1‑151 (MQ=14)
                                                                                         cACCGTCCGCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTCCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGaca                                                           <  2:2421720/151‑1 (MQ=255)
                                                                                          aCCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCCCCACCTGCCGCTCACCGTCGCCACCGCCACCGTATTCGCGGGTAAACCCGCCCCTACACAGATTGGTGGTGGACACACATCGGGGGTGGGaaca                                                          >  2:3735873/1‑148 (MQ=14)
                                                                                             ggccgtcgTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAgg                                                       >  1:5697301/8‑151 (MQ=255)
                                                                                                cgtcgTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACACGCTCCTACACAGATTGGTGGGGGACACACATCGGGGGCTGGACACAGGccc                                                    >  2:5770150/5‑150 (MQ=255)
                                                                                                  tcgTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCAtt                                                  >  1:1057494/3‑151 (MQ=255)
                                                                                                   cgTAGGAGCGGGTTTCCCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTg                                                 <  1:6147121/150‑1 (MQ=255)
                                                                                                            gggTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCCATTCCCCCCCGCCGCTCACCCTCGCCACCGCTACCGTATTCGGGGGTAAACCCGCCCCTACACAGATTGGGGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCgg                                        <  2:3687214/151‑1 (MQ=17)
                                                                                                                           gagGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAAcc                         >  2:4200185/1‑151 (MQ=255)
                                                                                                                             ggccggcgCTGCTGGCCAATTCCCACCCGCCGCTCACCGTCGCCAGCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCt                       <  2:1792771/151‑1 (MQ=255)
                                                                                                                                cggccCTGCTGGCCACTTTCCACCCGGCGCTCACCGGCGCCACCGCTACCGTGTTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTa                    <  2:4080986/151‑1 (MQ=255)
                                                                                                                                cggccCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTACACCCGCTCCTACACATATTGGTGGTGGACACACCTCGGGGGGTGGACACAGGCCAATTTAGGATTGGGCTTACACGCGAACACTGTa                    >  2:2988086/1‑151 (MQ=17)
                                                                                                                                 ggccCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAg                   >  2:4667260/1‑151 (MQ=255)
                                                                                                                                 ggccCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAg                   >  1:4718899/1‑151 (MQ=255)
                                                                                                                                  gccCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAgg                  <  1:979920/151‑1 (MQ=255)
                                                                                                                                   cccTGCTGGCCAATTCCCCCCCGCCCCTCACCGTCGCCACCGCTACCGTGTTCGCGGGTAAACCCCCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGa                 <  2:3894075/151‑1 (MQ=255)
                                                                                                                                   cccGGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGa                 <  1:2453465/151‑1 (MQ=255)
                                                                                                                                    ccTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGAGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTCTCCCCGCGCACACTGTAGGAg                >  1:432164/1‑151 (MQ=255)
                                                                                                                                    ccTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGGGGTGGACACACATCGGGGGTTGGACACAGTCCCTTGGAGGAGCGGGTTTACCCGCGAACCCTGgaggag                >  2:4138808/1‑151 (MQ=255)
                                                                                                                                     ctgctgGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGc               >  1:227998/1‑151 (MQ=255)
                                                                                                                                      tgctgGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCg              <  1:3160678/151‑1 (MQ=255)
                                                                                                                                       gctgGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCgg             >  1:3314052/1‑151 (MQ=255)
                                                                                                                                       gctgGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCgg             >  1:2068259/1‑151 (MQ=255)
                                                                                                                                       gctgGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCgg             >  1:6331525/1‑151 (MQ=255)
                                                                                                                                         tgGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGt           <  2:2345856/151‑1 (MQ=255)
                                                                                                                                            ccAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTa        >  1:4508828/1‑151 (MQ=255)
                                                                                                                                            ccAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTa        <  2:1057494/151‑1 (MQ=255)
                                                                                                                                              aaTTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGCGTAAACCCGCTCCTACACAGCTCCGTGGTGGACACACACCGGGGGTTGTACACAGGCCACTGTAGGAGCGGGTTTACCCCCGACCCCTGTACGCGCGGGTTTAcc      >  2:848243/1‑151 (MQ=255)
                                                                                                                                               atgtCCACCCGCCGCTCACCGTCGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTAccc     <  1:497677/148‑1 (MQ=255)
                                                                                                                                               atatCCACCCGCCGCTCACCGACGCCACCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTAccc     <  1:90598/148‑1 (MQ=255)
                                                                                                                                               aTTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTAccc     <  2:227998/151‑1 (MQ=255)
                                                                                                                                               aTTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTAccc     >  1:4367894/1‑151 (MQ=255)
                                                                                                                                                  tCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTACCcgcg  >  1:5789675/1‑151 (MQ=255)
                                                                                                                                                  |                                                                                                                                                      
CAAAAGTGCCCCGAACCAAAGTCTTGACGTAGGGGGGGGGCGGGAAAGTCACGTTAATGCTTCGTGGAGGCCATTCTAGCCTGGCGTCGCACCATCCTCTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGCTCACCGTCGCCACCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACAGATTGGTGGTGGACACACATCGGGGGTTGGACACAGGCCATTGTAGGAGCGGGTTTACCCGCGAACCCTGTAGGAGCGGGTTTACCCGCG  >  CP009974/769660‑769956

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑