Read alignment evidence... | |||||||||||
---|---|---|---|---|---|---|---|---|---|---|---|
seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | CP009974 | 833,303 | 0 | A | G | 69.8% | 406.1 / 269.9 | 310 | Y154C (TAC→TGC) | metG | methionine‑‑tRNA ligase |
Reads supporting (aligned to +/- strand): ref base A (49/44); new base G (106/109); total (157/153) | |||||||||||
Fisher's exact test for biased strand distribution p-value = 6.21e-01 | |||||||||||
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 6.16e-01 | |||||||||||
Rejected as consensus: Frequency below/above cutoff threshold. |
Only 100 of 316 total aligned reads displayed.
AGCTGTCGAGCCTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCAGACTTCCAGGCCATGCTGCAGCAGTG > CP009974/833153‑833453 | cTGTCGAGCCTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCg < 1:5732873/151‑1 (MQ=255) cTGTCGAGCCTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCg < 1:2779624/151‑1 (MQ=255) cTGTCGAGCCTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCATCATCAAGGGCACCTGCCCGAAGAGCGCGGCCGAAGACCAGTGCg > 2:2980456/1‑151 (MQ=255) gTCGAGCCTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGc < 2:4391167/151‑1 (MQ=255) tCGAGCCTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCGGACGTGCGCGGCCGAAGACCAGTgcggcg > 2:3385159/1‑151 (MQ=255) cGAGCCTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGa > 2:1874873/1‑151 (MQ=255) cGAGCCTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAACGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTTCGGCGa > 2:5215384/1‑151 (MQ=255) ggCCTGATCTACTCGCGCCTGCGCGGAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACa < 1:3968951/150‑1 (MQ=255) aGCCTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACa > 2:625351/1‑151 (MQ=255) gCCTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACa < 2:2587588/150‑1 (MQ=255) gCCTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACa > 1:2587588/1‑150 (MQ=255) ccTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAAc > 2:1646874/1‑151 (MQ=255) cTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACt < 1:2907871/151‑1 (MQ=255) cTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACt < 1:4188838/151‑1 (MQ=255) tGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTg < 2:2744074/151‑1 (MQ=255) tGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTg > 2:609758/1‑151 (MQ=255) gATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGc < 2:1129408/151‑1 (MQ=255) aTCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCg > 2:3164625/1‑151 (MQ=255) cgcgCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATg < 2:2056757/151‑1 (MQ=255) cgcgCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATg < 1:4663692/151‑1 (MQ=255) cgcCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCg < 1:3127848/151‑1 (MQ=255) tGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGc < 1:1969197/151‑1 (MQ=255) cgcgcGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGc < 2:5441252/150‑1 (MQ=255) gcgcGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGcc < 1:795906/151‑1 (MQ=255) gcgcGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGaaa > 1:2741150/1‑140 (MQ=255) gcgAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCAc > 2:3530339/1‑151 (MQ=255) gcgAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCACGAAGTGCGCGGCCGAAGACCAGTGCGGAAAAAAAAAAAAAAAATGCGGTGCCAc < 2:1599179/151‑1 (MQ=255) cgAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCAcc < 2:3880790/151‑1 (MQ=255) gAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCt < 1:1160242/151‑1 (MQ=255) gAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGaa < 2:6126796/135‑1 (MQ=255) gAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGaa > 1:6118201/1‑135 (MQ=255) aaGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCCTGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTa < 2:699454/151‑1 (MQ=255) ccGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCGTCATCAATGGCCCCTGCCCGAAGGGGGCGGCCGAGGACCGGTGCGGCGACACCTTCGAAACAGGCGCTGCCACCGACGc > 2:6338161/1‑151 (MQ=255) aTCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCg > 1:5327024/1‑151 (MQ=255) gCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGc < 1:4999336/151‑1 (MQ=255) cccGTTCGGTGCCGCAGTACTTCGACACGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCGGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTgaa < 2:3242878/151‑1 (MQ=255) ccGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTgaag < 1:3473836/151‑1 (MQ=255) cggtcggtGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTgaaga > 2:6183412/1‑151 (MQ=255) cggtcggtGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTgaaga < 2:1061984/151‑1 (MQ=255) ggtcggtGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTgaagaa > 1:5867282/1‑151 (MQ=255) ggtGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAAcccc > 1:615563/1‑151 (MQ=255) aGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGc > 2:5596111/1‑151 (MQ=255) gTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCg > 2:6053017/1‑151 (MQ=255) aCTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGAt > 1:6010015/1‑151 (MQ=255) cTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGAtc < 2:1027884/151‑1 (MQ=255) tCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGAtctc < 2:4970244/151‑1 (MQ=255) tCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGAtctc < 1:4935820/151‑1 (MQ=255) cGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTcc < 1:4580035/151‑1 (MQ=255) cccGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGt < 1:63144/151‑1 (MQ=255) ccGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAACTGCGGTGCCACCTACGCACCCACCGAGCTGAACAACCCCAAGTCAGCGATCTCCGCTg > 2:194198/1‑151 (MQ=255) ccGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGCGCTGAAGAACCCCAAGTCAGCGATCTCCGGTg > 2:4887192/1‑151 (MQ=255) cGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTgaaga > 2:335500/1‑126 (MQ=255) cGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTgaaga < 1:335500/126‑1 (MQ=255) cGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGc > 1:3873203/1‑151 (MQ=255) cGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGc > 1:6035059/1‑151 (MQ=255) ggAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGcc > 1:1570529/1‑151 (MQ=255) ggAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGcc > 1:4121264/1‑151 (MQ=255) ggAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAAACCCAAGTCAGCGATCTCCGGTGcc > 1:301811/1‑151 (MQ=255) ggAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGAAAAAACAAAGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGcc < 2:5724634/151‑1 (MQ=255) gAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCa > 2:5875442/1‑151 (MQ=255) aaaaGGCACGGTCCTTGCCGACCGCCTCATCAAGGGCACCCGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCAcc < 2:4620914/151‑1 (MQ=255) aaaGGCATGCTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCCACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCAccc < 2:5120276/151‑1 (MQ=255) aaGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCCCCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCAcccc > 2:4224510/1‑151 (MQ=255) gCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGt < 1:6402179/151‑1 (MQ=255) gCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGt < 1:3253705/151‑1 (MQ=255) tGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTAtt < 1:4160736/151‑1 (MQ=255) ccGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTc < 1:1803837/151‑1 (MQ=255) ccGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTc > 2:1301601/1‑151 (MQ=255) cGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTcc > 1:903610/1‑151 (MQ=255) cGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTcc < 2:393547/151‑1 (MQ=255) gACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTccc < 1:449566/151‑1 (MQ=255) gACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTccc < 1:4374113/151‑1 (MQ=255) gACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTccc > 1:1310792/1‑151 (MQ=255) cGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGc < 2:3768227/151‑1 (MQ=255) cGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGc < 1:1233591/151‑1 (MQ=255) gCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCa < 1:2471664/151‑1 (MQ=255) ttCATGAAGGGCACCTGACCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCAtt < 2:310993/151‑1 (MQ=255) ttCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCAtt > 1:4869562/1‑151 (MQ=255) ttCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCAtt > 1:1077121/1‑151 (MQ=255) ttCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCAtt < 2:1426090/151‑1 (MQ=255) tcatcaAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCAttt > 1:2203923/1‑151 (MQ=255) catcaAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATttc > 1:149029/1‑151 (MQ=255) tcaAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATttctt < 2:799501/151‑1 (MQ=255) caAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATttcttc < 1:1424684/151‑1 (MQ=255) aaGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATttcttct < 1:5554300/151‑1 (MQ=255) aaGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATttcttct > 2:4460900/1‑151 (MQ=255) aGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCt < 2:2040245/85‑1 (MQ=255) cTGCCCGAAGTGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCtc > 2:4359451/1‑150 (MQ=255) cccGAAGTGCGCGGCCGGAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCa < 2:243342/151‑1 (MQ=255) gaGTGGGCGGCCGAAGGCGAGTACCGCGACAACTGCGAAAAGTGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGAGCTCCGGGGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCAGACt < 2:4294256/150‑1 (MQ=255) tGCGCGGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCAGACTTcc < 1:3527274/151‑1 (MQ=255) cgcgGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCAGACTTCCAg < 1:4763715/151‑1 (MQ=255) gcgGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCATCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCAGACTTCCAgg < 2:4041806/151‑1 (MQ=255) gcgGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCAGACTTCTAgg > 1:3804316/1‑151 (MQ=255) gcgGCCGAAGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCAGACTTCCAgg < 1:2058017/151‑1 (MQ=255) aaGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCCGACTTCCAGGCCAtccc > 2:5252266/1‑148 (MQ=255) aaGACCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCAGACTTCCAGGCCAtgct > 1:3145107/1‑151 (MQ=255) aaGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCAGACTTCCAGGCCAtgct < 2:909425/151‑1 (MQ=255) aCCAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCAGACTTCCAGGCCATGCTgca > 1:453327/1‑151 (MQ=255) ccAGTGCGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCAGACTTCCAGGCCATGCTgcag > 2:226546/1‑151 (MQ=255) | AGCTGTCGAGCCTGATCTACTCGCGCCTGCGCGAAGCCGGGCACATCGCCACCCGGTCGGTGACCCAGTACTTCGACCCGGAAAAAGGCATGTTCCTTGCCGACCGCTTCATCAAGGGCACCTGCCCGAAGTGCGCGGCCGAAGACCAGTACGGCGACAACTGCGAAAAATGCGGTGCCACCTACGCACCCACCGAGCTGAAGAACCCCAAGTCAGCGATCTCCGGTGCCACCCCGGTATTGCGTGACTCCCAGCATTTCTTCTTCAAGCTGCCAGACTTCCAGGCCATGCTGCAGCAGTG > CP009974/833153‑833453 |
Alignment Legend |
---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |