Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099743,771,8830A.69.5% 345.2 / inf 204noncoding (76/76 nt)RPPX_16845tRNA‑Glu
Reads supporting (aligned to +/- strand):  ref base A (29/33);  new base . (53/88);  total (83/121)
Fisher's exact test for biased strand distribution p-value = 2.77e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.98e-01
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 213 total aligned reads displayed.

TGCGCGCCACTTGCAGCGTAAAGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCAAATCAAGATCTACAGAGTTCCATGAGATTCTGTAAATCCTCGAAAACAGACGCTTCGGCGTCT  >  CP009974/3771733‑3772025
                                                                                                                                                       |                                                                                                                                               
tGCGCGCCACTTGCAGCGTACAGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCa                                                                                                                                                 <  1:176685/151‑1 (MQ=255)
  cgcgcCACTTGCAGCGTAAAGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCaat                                                                                                                                               <  2:2361713/151‑2 (MQ=255)
    cgcTACTTGCAGCGTAAAGCGCACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCaatgc                                                                                                                                             <  2:5849882/151‑4 (MQ=255)
     gcCACTTGCAGCGTAAAGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCaatgcg                                                                                                                                            >  2:6192758/1‑147 (MQ=255)
     gcCACTTGCAGCGTAAAGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCaatgcg                                                                                                                                            <  2:1712015/151‑5 (MQ=255)
          ttGCAGCGTAAAGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAAt                                                                                                                                      <  1:3001760/151‑1 (MQ=255)
          ttGCAGCGTAAAGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAAt                                                                                                                                      <  2:2741338/151‑1 (MQ=255)
           tGCAGCGTAAAGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATa                                                                                                                                     >  2:1308336/1‑151 (MQ=255)
            gCAGCGTAAAGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAg                                                                                                                                    >  2:4432584/1‑151 (MQ=255)
              aGCGTAAAGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCt                                                                                                                                  <  1:6288578/151‑1 (MQ=255)
              aGCGTAAAGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGCCCCC‑TAGGGGACGCC‑AATCCGGGCATAGcc                                                                                                                                  >  2:3692252/1‑150 (MQ=255)
                cGTAAAGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCa                                                                                                                                <  2:1241449/151‑1 (MQ=255)
                agaaaaGCGCACGGCGAAACGCGGCAGGGAGTGAAATCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTc                                                                                                                                 <  2:4747765/148‑1 (MQ=255)
                 gaaaaGCACAAGGCCAAACCGTGCAGGGAATGAACGCAGGCAGTAATGCCAGTAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCa                                                                                                                                <  2:5644811/149‑1 (MQ=18)
                    aaGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAAt                                                                                                                                      >  2:4573340/1‑141 (MQ=255)
                    aaGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTg                                                                                                                            <  2:1370425/151‑1 (MQ=255)
                     aagccacaGCGAAACGC‑GCAGGGCATGGAAGGCGGCCATGAAGGCAGTCGTGTGTCCCCTTCGTCTAGGGGCCTAGGACCCCGCCCTTTCCCGGCGGGAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTgg                                                                                                                           <  2:1437856/147‑1 (MQ=12)
                     aGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTgg                                                                                                                           >  2:4005679/1‑151 (MQ=255)
                     aGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTgg                                                                                                                           <  1:3421377/151‑1 (MQ=255)
                       cacacaGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTa                                                                                                                         <  2:4955908/151‑1 (MQ=255)
                       cacacaGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACCGCGGTAACAGGGGTTCGGGGCCCCGAAGGGGACCCC‑‑ATGGGGGGATAGCTCAggtggtt                                                                                                                         >  2:653877/1‑150 (MQ=21)
                         cacaGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGGATAGCTCAGTTGGTaga                                                                                                                       >  1:4419503/1‑151 (MQ=255)
                         cacaGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTaga                                                                                                                       <  1:1719237/151‑1 (MQ=255)
                           caGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGc                                                                                                                     >  2:184371/1‑151 (MQ=255)
                           caGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGc                                                                                                                     <  2:4552583/151‑1 (MQ=255)
                           caGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAAAAACGAAGTGGGTAgcgc                                                                                                                     >  1:1459470/1‑151 (MQ=21)
                            aGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTGGGTAGAGCa                                                                                                                    >  1:1151223/1‑151 (MQ=255)
                             gCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCAc                                                                                                                   <  2:6357129/151‑1 (MQ=255)
                             gCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCAc                                                                                                                   <  1:2228369/151‑1 (MQ=255)
                             cggAAACGGTGCAGGGAGTGAAATCAGGGAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCAc                                                                                                                   <  2:4780368/149‑1 (MQ=21)
                              cGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACg                                                                                                                  <  1:6133540/151‑1 (MQ=255)
                              cGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTATAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACg                                                                                                                  <  1:4996283/151‑1 (MQ=255)
                               gAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGa                                                                                                                 >  1:3863181/1‑151 (MQ=255)
                                aaaCGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGAc                                                                                                                <  2:3099470/151‑1 (MQ=255)
                                aaaCGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCCGGGATAGCCTAGGTGGTAGAGGACggc                                                                                                                >  1:2191320/1‑149 (MQ=21)
                                 aaCGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGAcc                                                                                                               <  1:1620189/151‑1 (MQ=255)
                                 aaCGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGAcc                                                                                                               <  1:1621423/151‑1 (MQ=255)
                                 aaCGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGAcc                                                                                                               <  1:1977479/151‑1 (MQ=255)
                                  aCGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAAAAGCCCCGTTGGGAGGGCCCGAccc                                                                                                              >  2:6103381/1‑150 (MQ=21)
                                   cgcgGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCtt                                                                                                             <  2:880610/151‑1 (MQ=255)
                                      ggCAGGGCGTGAAATCAGGCAGTAATGACAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGc                                                                                                           <  2:3016794/151‑1 (MQ=255)
                                       gCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGGGGGAATAGGCCAGGTGGTAGTGgacgacgtacacg                                                                                                         >  1:2827225/1‑144 (MQ=18)
                                         aGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAg                                                                                                       <  1:5044392/151‑1 (MQ=255)
                                           ggAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGt                                                                                                     <  1:4571787/151‑1 (MQ=255)
                                            gAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTc                                                                                                    <  1:6410321/151‑1 (MQ=255)
                                               tGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCggg                                                                                                 >  1:681573/1‑151 (MQ=255)
                                                gAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCgggg                                                                                                <  2:1534195/151‑1 (MQ=255)
                                                gAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCgggg                                                                                                <  2:2290402/151‑1 (MQ=255)
                                                 aaaGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGt                                                                                               >  1:847092/1‑151 (MQ=255)
                                                  aaGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCCCAGGTGGTAGGGCCCGACCTTGCCCAGGGCgggggc                                                                                              >  2:4628900/1‑149 (MQ=21)
                                                    gcaggcagTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTc‑gc                                                                                           <  2:4522389/151‑1 (MQ=255)
                                                     caggcagTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTc‑gcg                                                                                          <  2:2193912/151‑1 (MQ=255)
                                                     caggcagTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTc‑gcg                                                                                          <  2:4505648/151‑1 (MQ=255)
                                                        gcagTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGGCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAg                                                                                        <  2:2047055/151‑1 (MQ=255)
                                                          agTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCCAGGTGGGTGGGGCCCG‑CCCTGCCAAGGTCGGGGTCGGCGAGtt                                                                                      >  2:188688/1‑151 (MQ=18)
                                                          agTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTc                                                                                     <  2:4189091/151‑1 (MQ=255)
                                                          agTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTc                                                                                     >  2:4648744/1‑151 (MQ=255)
                                                           gTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGGAGAGCCCGACCTTGCCAAGGTCGGGGTC‑GCGAGGTCg                                                                                    >  2:2028304/1‑151 (MQ=255)
                                                            tAATGCCAGCAGCGTGTCCCCTTGGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGa                                                                                   <  2:5990998/151‑1 (MQ=255)
                                                             aaagacagctgTGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGa                                                                                   <  1:2362604/146‑1 (MQ=255)
                                                             aaTGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAg                                                                                  >  1:6344680/1‑151 (MQ=255)
                                                             aaTGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAg                                                                                  <  2:1163711/151‑1 (MQ=255)
                                                              aTGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGt                                                                                 <  1:547713/151‑1 (MQ=255)
                                                                  gtgttgtgtgtCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGtctc                                                                              <  1:1887165/144‑1 (MQ=255)
                                                                  cagcagCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCg                                                                             <  2:1063749/151‑1 (MQ=255)
                                                                   tgttgtgtgtCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCg                                                                             >  1:4006779/7‑151 (MQ=255)
                                                                     gggtgggtCCCCTTCGTTCAGTGGCCTAGGGCCCCGCCCTTTCACGGCGGTAACAGGGGTTCGAGGCCCC‑GAGGGGGCGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGtt                                                                           <  2:3384647/145‑1 (MQ=25)
                                                                      tgtgtgtCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGttt                                                                          >  2:1630694/4‑151 (MQ=255)
                                                                       gtgtgtCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTc                                                                         >  2:5451345/3‑151 (MQ=255)
                                                                       gcGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTc                                                                         >  2:3872238/1‑151 (MQ=255)
                                                                       gcGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTAGGGGGC‑GCGAGTTCGCGTCTGGTTTcc                                                                        >  1:3872632/1‑151 (MQ=25)
                                                                         gtgtCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTccc                                                                       >  2:2499497/1‑151 (MQ=255)
                                                                         gtgtCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCg                                                                      <  1:6192758/151‑1 (MQ=255)
                                                                          tgtCCCCTTCGTCTCGTGGCTTAGGACCCCGCCTTTCCACGGCGGTAAAAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGc                                                                     <  1:1022155/151‑1 (MQ=21)
                                                                           gtCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCACATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGc                                                                     >  2:4339652/1‑151 (MQ=255)
                                                                           gtCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCt                                                                    >  1:3779029/1‑151 (MQ=255)
                                                                            tCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCt                                                                    >  1:1941999/1‑151 (MQ=255)
                                                                            tCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTGTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTc                                                                   <  2:1942051/151‑1 (MQ=255)
                                                                             ccccTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTcc                                                                  <  1:719441/151‑1 (MQ=255)
                                                                              cccTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTcc                                                                  <  2:4156369/151‑1 (MQ=255)
                                                                               ccTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCtt                                                                                                             >  1:4811753/1‑108 (MQ=255)
                                                                               ccTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCa                                                                 >  1:6361601/1‑151 (MQ=255)
                                                                                cTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGGAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCag                                                                <  1:4842680/151‑2 (MQ=255)
                                                                                 ttCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCagtt                                                              <  1:4701333/151‑4 (MQ=255)
                                                                                 ttCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCagtt                                                              <  1:562194/151‑4 (MQ=255)
                                                                                  tCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCagttt                                                             <  2:348337/151‑5 (MQ=255)
                                                                                   cGTCTAGTGGCCTAGGACAGCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGGCGCCAAATGCGGGAATAGCTCAGTTGGTCGAGCACGCCCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCagttt                                                             <  1:2638428/151‑5 (MQ=25)
                                                                                     tCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCagtttctc                                                          <  1:5767594/151‑8 (MQ=255)
                                                                                        aGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTc                                                                                     >  1:4600818/1‑122 (MQ=255)
                                                                                         gTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCT‑TAGGGGACGCC‑AATGCGGGAATAGTTCAGTTGGTGGAGCACGACCTTGCCAAGGAAGGGGGC‑GCGAGGTCGGGTCTCGGTTCCCGCTCCAGATcgcccgac                                                      >  1:3270807/1‑144 (MQ=21)
                                                                                         gTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGACTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAACACCACCCTGCCAAGGGCGGGGGC‑GGGAGTTTGAGTCTCGTTTCCCGCTCCAGATTAAgggcc                                                      >  1:4938454/1‑147 (MQ=21)
                                                                                                   acacCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCAGATCAAGATCTACAGCGtcc                                             >  1:1295691/1‑149 (MQ=255)
                                                                                                         cgcTTGCAGGGCGGGAAGAGGGCTTCGAGTCCCC‑TAGGGCACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCAAATCAAGATCTACAGAGTTCCATgaga                                      <  2:4898857/149‑1 (MQ=21)
                                                                                                            tttCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGtt                                                                           <  1:4673247/112‑1 (MQ=255)
                                                                                                            tttCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCACGTCAAGAGCTGCGGAGTCCCagcagagg                                    >  2:4824709/1‑144 (MQ=21)
                                                                                                                        aaCAGGGGTTCGAGTCCCC‑TAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCAAATCAAGATCTACAGAGTTCCATGAGATTCTGTAAATCCTCg                       >  2:2108362/1‑151 (MQ=255)
                                                                                                                                        ccc‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCAAATCAAGATCTACAGAGTTCCATGAGATTCTGTAAATCCTCGAAAACAGACGCTTCg        >  1:3495685/1‑151 (MQ=255)
                                                                                                                                            tAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTag                                                                                                                        >  2:5304184/1‑36 (MQ=18)
                                                                                                                                            tAGGGGACGCC‑AATGCGGGAATAGCTCAGTTGGTag                                                                                                                        <  1:5304184/36‑1 (MQ=18)
                                                                                                                                              ggggACGCC‑AATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAg                                                                                                       <  2:3318342/51‑1 (MQ=255)
                                                                                                                                                       |                                                                                                                                               
TGCGCGCCACTTGCAGCGTAAAGCACACAGCGAAACGCGGCAGGGAGTGAAAGCAGGCAGTAATGCCAGCAGCGTGTCCCCTTCGTCTAGTGGCCTAGGACACCGCCCTTTCACGGCGGTAACAGGGGTTCGAGTCCCC‑TAGGGGACGCCAAATGCGGGAATAGCTCAGTTGGTAGAGCACGACCTTGCCAAGGTCGGGGTC‑GCGAGTTCGAGTCTCGTTTCCCGCTCCAAATCAAGATCTACAGAGTTCCATGAGATTCTGTAAATCCTCGAAAACAGACGCTTCGGCGTCT  >  CP009974/3771733‑3772025

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑