Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 3,400,410 A→G T381A (ACC→GCC)  RPPX_15160 → chemotaxis protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099743,400,4100AG100.0% 1172.1 / NA 323T381A (ACC→GCC) RPPX_15160chemotaxis protein
Reads supporting (aligned to +/- strand):  ref base A (0/0);  new base G (158/165);  total (158/165)

Only 100 of 323 total aligned reads displayed.

GGCTGGCTCCGGGCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTACCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACATCGAGCAAATGG  >  CP009974/3400262‑3400557
                                                                                                                                                    |                                                                                                                                                   
ggctggcgCCGGGCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGcc                                                                                                                                                   <  2:1654496/151‑1 (MQ=255)
  ctggctCCGGGCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCga                                                                                                                                                 <  1:317903/151‑1 (MQ=255)
    ggctCCGGGCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCgacc                                                                                                                                               <  1:938149/151‑1 (MQ=255)
        ccGGCCAGCAGGGCCTGGCACGCATGGAAGCGACCATGCACCAGGTGATGGGCGCTGCAGACCTGTTCAATGCCACGCTCGGTAGCCTCAACGCGACAGCCAGCCACATCACCCAGATGGTGGTAACCACCGCTACGGTTGCCgaccagac                                                                                                                                           >  2:5423325/1‑151 (MQ=255)
           ggCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCaa                                                                                                                                        >  2:1005838/1‑151 (MQ=255)
           ggCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCaa                                                                                                                                        <  1:2197939/151‑1 (MQ=255)
             cagcagGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATc                                                                                                                                      >  2:5640801/1‑151 (MQ=255)
              agcagGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATct                                                                                                                                     <  1:3318455/151‑1 (MQ=255)
              agcagGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATct                                                                                                                                     <  1:5617660/151‑1 (MQ=255)
              agcagGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATct                                                                                                                                     <  1:1341104/151‑1 (MQ=255)
                    gCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTc                                                                                                                               >  2:4705517/1‑151 (MQ=255)
                     ccTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGATCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCg                                                                                                                              <  2:5767762/151‑1 (MQ=255)
                        ggCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCACTCTGCTGTCGCTc                                                                                                                           <  1:3375794/151‑1 (MQ=255)
                         gCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCa                                                                                                                          <  2:5156512/151‑1 (MQ=255)
                         gCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCa                                                                                                                          <  2:159594/151‑1 (MQ=255)
                          cACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCaa                                                                                                                         <  2:1912618/151‑1 (MQ=255)
                           aCGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAAc                                                                                                                        <  2:45028/151‑1 (MQ=255)
                              cATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAAcgcc                                                                                                                     >  1:1452124/1‑151 (MQ=255)
                              cATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAAcgcc                                                                                                                     <  2:1959316/151‑1 (MQ=255)
                               aTGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAAcgccg                                                                                                                    <  1:4699503/151‑1 (MQ=255)
                                 ggAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACgccgcc                                                                                                                  <  1:3752756/151‑1 (MQ=255)
                                   aaGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCac                                                                                                                >  2:4306397/1‑150 (MQ=255)
                                    agagACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATc                                                                                                               <  1:1004987/151‑1 (MQ=255)
                                      cgaCCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGa                                                                                                             <  2:4221534/150‑1 (MQ=255)
                                      agaCCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGa                                                                                                             >  2:3702300/1‑151 (MQ=255)
                                               aCCCGGTGCTGGGCGCTGCCGACCTCGTCAATGCCACGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATAGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGaaaa                                                                                                    <  1:4446667/151‑1 (MQ=255)
                                               aCCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGaaaa                                                                                                    <  1:2348399/151‑1 (MQ=255)
                                               aCCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGaaaa                                                                                                    >  1:200201/1‑151 (MQ=255)
                                                ccAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAg                                                                                                   <  1:3534588/151‑1 (MQ=255)
                                                ccAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAg                                                                                                   >  1:2929051/1‑151 (MQ=255)
                                                 cAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAgg                                                                                                  >  2:1531232/1‑151 (MQ=255)
                                                 cAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAgg                                                                                                  <  2:485505/151‑1 (MQ=255)
                                                  aGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGc                                                                                                 <  1:3969376/151‑1 (MQ=255)
                                                   ggTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGcc                                                                                                <  2:4414208/151‑1 (MQ=255)
                                                   ggTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGcc                                                                                                >  2:571264/1‑151 (MQ=255)
                                                    gTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCg                                                                                               <  1:5476631/151‑1 (MQ=255)
                                                       gggggCGCGGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCGTCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAGCGCCGCCATCGAAGCGGAAAAGGCCGGTg                                                                                            <  2:5023348/149‑1 (MQ=255)
                                                       aTGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTg                                                                                            >  2:2581745/1‑151 (MQ=255)
                                                           gcgcTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAata                                                                                        >  2:2379070/1‑151 (MQ=255)
                                                            cgcTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAatat                                                                                       <  2:386830/151‑1 (MQ=255)
                                                                   gACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAGTATGGCtgcg                                                                                >  1:1586366/1‑151 (MQ=255)
                                                                   gACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCcgcg                                                                                >  1:6034686/1‑151 (MQ=255)
                                                                   gACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCcgcg                                                                                >  2:1255030/1‑151 (MQ=255)
                                                                   gACCGGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCcgcg                                                                                <  2:4183804/151‑1 (MQ=255)
                                                                         gTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTg                                                                          <  2:6492481/151‑1 (MQ=255)
                                                                          tCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGc                                                                         <  1:3829326/151‑1 (MQ=255)
                                                                          tCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGc                                                                         >  1:2736805/1‑151 (MQ=255)
                                                                           cAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGcc                                                                        <  1:4297618/151‑1 (MQ=255)
                                                                           cAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGcc                                                                        <  1:5358665/151‑1 (MQ=255)
                                                                           cAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGcc                                                                        <  2:3271396/151‑1 (MQ=255)
                                                                             aTGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGACGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGt                                                                      <  1:1782336/151‑1 (MQ=255)
                                                                             aTGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGt                                                                      >  2:178129/1‑151 (MQ=255)
                                                                                ccAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTggc                                                                   >  1:6365028/1‑150 (MQ=255)
                                                                                ccAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGt                                                                   >  1:6175830/1‑151 (MQ=255)
                                                                                 cAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCAGCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTc                                                                  <  2:4061604/151‑1 (MQ=255)
                                                                                  acgCTCGGTATCCTCAACGAGACAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGCCCAATCTGCTGTCCCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTcg                                                                 <  2:2753058/149‑1 (MQ=255)
                                                                                  aaGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTcg                                                                 >  2:2467969/1‑151 (MQ=255)
                                                                                       cGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGAc                                                             >  1:610620/1‑150 (MQ=255)
                                                                                        ggTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCg                                                           >  2:2954207/1‑151 (MQ=255)
                                                                                        ggTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCg                                                           >  1:2104108/1‑151 (MQ=255)
                                                                                         gTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGa                                                          <  2:305167/151‑1 (MQ=255)
                                                                                          tATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGaa                                                         >  1:2545003/1‑151 (MQ=255)
                                                                                           aTCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAg                                                        <  2:5059087/151‑1 (MQ=255)
                                                                                           aTCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAg                                                        >  1:2827232/1‑151 (MQ=255)
                                                                                            tCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGt                                                       <  1:6472596/151‑1 (MQ=255)
                                                                                             ccTCAACGAGAAAGCCAGCAACAACAACCAGATGGTGGTAAACATCGTCAAGGTCGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTg                                                      <  2:2618834/151‑1 (MQ=255)
                                                                                              cTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTgc                                                     >  2:6370265/1‑151 (MQ=255)
                                                                                               tCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTgcg                                                    <  1:4644146/151‑1 (MQ=255)
                                                                                                 aaCGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGcgcc                                                  >  2:6103703/1‑151 (MQ=255)
                                                                                                 aaCGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGcgcc                                                  >  1:5236950/1‑151 (MQ=255)
                                                                                                   cGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGcgccgc                                                >  2:214210/1‑151 (MQ=255)
                                                                                                   cGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGcgccgc                                                <  2:6189018/151‑1 (MQ=255)
                                                                                                     agaAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCtt                                              <  2:339904/151‑1 (MQ=255)
                                                                                                     agaAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCtt                                              <  2:164211/151‑1 (MQ=255)
                                                                                                        aaGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGc                                           <  1:3492846/151‑1 (MQ=255)
                                                                                                          gCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCg                                         >  1:568659/1‑151 (MQ=255)
                                                                                                             aGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGc                                           <  1:6503962/146‑1 (MQ=255)
                                                                                                             aGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGAcc                                      <  2:1160434/151‑1 (MQ=255)
                                                                                                               cAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAg                                    <  2:2980134/151‑1 (MQ=255)
                                                                                                               cAACATCACCCAGATGGTGGTAACCATCGTCAAGGTGGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAg                                    <  2:732477/151‑1 (MQ=255)
                                                                                                                aaCATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGa                                   >  1:2600062/1‑151 (MQ=255)
                                                                                                                  gaTCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGAcc                                 <  2:3753775/150‑1 (MQ=255)
                                                                                                                  cATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGAcc                                 <  1:1525082/151‑1 (MQ=255)
                                                                                                                  cATCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGAcc                                 <  2:5914850/151‑1 (MQ=255)
                                                                                                                   aTCACCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGAccg                                >  2:2267073/1‑151 (MQ=255)
                                                                                                                      aCCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGAccgccg                             <  1:1052206/151‑1 (MQ=255)
                                                                                                                      aCCCAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGAccgccg                             <  1:5962295/151‑1 (MQ=255)
                                                                                                                       cccAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGt                            <  2:6034686/151‑1 (MQ=255)
                                                                                                                       cccAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGt                            <  1:1909260/151‑1 (MQ=255)
                                                                                                                         cAGATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTgg                          >  1:410523/1‑151 (MQ=255)
                                                                                                                           gATGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGcc                        <  1:1183181/151‑1 (MQ=255)
                                                                                                                            aTGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCa                       >  1:4349044/1‑151 (MQ=255)
                                                                                                                            aTGGTGGTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCa                       >  2:670011/1‑151 (MQ=255)
                                                                                                                             tggtggTAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCAc                      <  1:746084/151‑1 (MQ=255)
                                                                                                                                 ggtAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCCTCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTAc                  <  1:500944/151‑1 (MQ=255)
                                                                                                                                   tAACCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGa                >  1:4788546/1‑151 (MQ=255)
                                                                                                                                     aCCATCGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACa              <  1:2298233/151‑1 (MQ=255)
                                                                                                                                          cGTCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACATCGAg         >  2:5240754/1‑151 (MQ=255)
                                                                                                                                            tCAAGGTTGCCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACATCGAGCa       <  1:5129446/151‑1 (MQ=255)
                                                                                                                                              aaGGTTGCCGACCAGACCAAGCTGCTGTCGCTCAACGCCGCCATCGAAGCGGACAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACATCGAGCaaa     <  2:4449646/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GGCTGGCTCCGGGCAGCAGGGCCTGGCACGCATGGAAGAGACCATGCACCAGGTGATGGGCGCTGCCGACCTGGTCAATGCCAAGCTCGGTATCCTCAACGAGAAAGCCAGCAACATCACCCAGATGGTGGTAACCATCGTCAAGGTTACCGACCAGACCAATCTGCTGTCGCTCAACGCCGCCATCGAAGCGGAAAAGGCCGGTGAATATGGCCGCGGCTTTGCCGTGGTCGCGACCGAAGTGCGCCGCTTGGCCGACCAGACCGCCGTGGCCACCTACGACATCGAGCAAATGG  >  CP009974/3400262‑3400557

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑