Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 3,535,334 A→G D113G (GAC→GGC)  RPPX_15795 → hydrolase Nlp/P60

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099743,535,3340AG99.7% 1222.0 / NA 341D113G (GAC→GGC) RPPX_15795hydrolase Nlp/P60
Reads supporting (aligned to +/- strand):  ref base A (0/0);  major base G (182/158);  minor base T (0/1);  total (182/159)
Fisher's exact test for biased strand distribution p-value = 4.66e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 343 total aligned reads displayed.

GGCAATACGCCGGACTCCGGCTTCGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGACCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTACTGGGCCAAGGCCTACCT  >  CP009974/3535186‑3535481
                                                                                                                                                    |                                                                                                                                                   
   aaTACGCCGGACTCCGGCTTCGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTgg                                                                                                                                                <  2:509799/151‑1 (MQ=255)
    ctACGCCGGCCTCCGGCTTCGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGgt                                                                                                                                               <  2:271773/150‑1 (MQ=255)
      aCGCCGGACTCCGGCTTCGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGgtgt                                                                                                                                             <  2:5950477/151‑1 (MQ=255)
        gCCGGACTCCGGCTTCGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGttc                                                                                                                                           <  2:5298188/151‑1 (MQ=255)
        gCCGGACTCCGGCTTCGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGttc                                                                                                                                           >  1:4445977/1‑151 (MQ=255)
        gCCGGACTCCGGCTTCGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGttc                                                                                                                                           <  1:5853380/151‑1 (MQ=255)
          cGGACTCCGGCTTCGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGttctt                                                                                                                                         <  2:4517251/151‑1 (MQ=255)
           ggACTCCGGCTTCGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGttcttc                                                                                                                                        <  1:1924355/151‑1 (MQ=255)
             aCTCCGGCTTCGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGc                                                                                                                                      >  2:4726428/1‑151 (MQ=255)
              cTCCGGCTTCGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGcc                                                                                                                                     >  1:2533229/1‑151 (MQ=255)
                ccGGCTTCGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGccac                                                                                                                                   <  1:3374232/151‑1 (MQ=255)
                       cGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTggg                                                                                                                            >  1:47007/1‑151 (MQ=255)
                          cTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGc                                                                                                                         >  1:3706188/1‑151 (MQ=255)
                          cTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGc                                                                                                                         >  1:2270854/1‑151 (MQ=255)
                           tGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCt                                                                                                                        <  1:4199884/151‑1 (MQ=255)
                            gCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTc                                                                                                                       <  2:1249834/151‑1 (MQ=255)
                            gCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTc                                                                                                                       >  1:2202550/1‑151 (MQ=255)
                             cAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCg                                                                                                                      <  1:675440/151‑1 (MQ=255)
                              ggCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGc                                                                                                                     <  1:3919308/150‑1 (MQ=255)
                               gCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCa                                                                                                                    >  2:2364135/1‑151 (MQ=255)
                               gCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCa                                                                                                                    <  1:4866330/151‑1 (MQ=255)
                                gggTGTGATCAAGTATGTGTACCGTGAGGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAg                                                                                                                   <  2:5615220/150‑1 (MQ=255)
                                   tCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTc                                                                                                                >  1:1703394/1‑151 (MQ=255)
                                    cggATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGAGTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCa                                                                                                               <  2:4132721/149‑1 (MQ=255)
                                       aTCAACTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCCCTCGACGCGAGAGGTGATTGTCATGCGCGCCCCGACGGTGAGTGTGAGCTCGCTGCAGTCTGGTGGCCTGGTGCTCTGCGCCACCAGTGGGGGCTCTCAGGTCCGcc                                                                                                            >  2:101998/1‑151 (MQ=255)
                                          aaGTATGTGGACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATg                                                                                                         <  2:4822138/151‑1 (MQ=255)
                                            gTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGcc                                                                                                       >  1:5596843/1‑151 (MQ=255)
                                            gTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGcc                                                                                                       <  1:1199434/151‑1 (MQ=255)
                                             tATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCg                                                                                                      <  1:5591235/151‑1 (MQ=255)
                                                gtgtACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCa                                                                                                   <  2:5640703/151‑1 (MQ=255)
                                                  gtACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATc                                                                                                 >  1:3453011/1‑151 (MQ=255)
                                                  gtACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATc                                                                                                 >  1:1885295/1‑151 (MQ=255)
                                                  gtACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATc                                                                                                 <  2:2556947/151‑1 (MQ=255)
                                                   tACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCt                                                                                                >  1:6477223/1‑151 (MQ=255)
                                                   tACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCt                                                                                                >  1:1557541/1‑151 (MQ=255)
                                                     ccGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACCCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTAt                                                                                              <  2:5748233/151‑1 (MQ=255)
                                                      cGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATg                                                                                             <  1:3841170/151‑1 (MQ=255)
                                                       gTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGt                                                                                            <  1:6535721/151‑1 (MQ=255)
                                                       gTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGt                                                                                            <  1:5429234/151‑1 (MQ=255)
                                                       gTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGt                                                                                            >  2:370575/1‑151 (MQ=255)
                                                         gATGCTGCTGGCATCAGCCTGACGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCg                                                                                          <  2:6202893/151‑1 (MQ=255)
                                                          gtgcggcTGGCATCAGCCGGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCgg                                                                                         <  2:5830236/150‑1 (MQ=255)
                                                              tgctgGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGAc                                                                                     >  2:2973226/1‑151 (MQ=255)
                                                                ctgGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACgg                                                                                   >  2:2887604/1‑151 (MQ=255)
                                                                   gCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGgcg                                                                                <  1:2324922/151‑1 (MQ=255)
                                                                   gCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGgcg                                                                                >  2:3526397/1‑151 (MQ=255)
                                                                     aTCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCt                                                                              <  1:1048466/151‑1 (MQ=255)
                                                                     aTCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCt                                                                              <  1:6399354/151‑1 (MQ=255)
                                                                     aTCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCt                                                                              >  1:3001318/1‑151 (MQ=255)
                                                                      tCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCtt                                                                             >  1:583310/1‑151 (MQ=255)
                                                                       cAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTc                                                                            <  2:4320412/151‑1 (MQ=255)
                                                                        aGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCg                                                                           <  1:2378298/151‑1 (MQ=255)
                                                                        aGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCg                                                                           >  2:5439147/1‑151 (MQ=255)
                                                                         gCCTGCCGCGGTCGAGGCGAGAGAGGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCAGGCCGGCATCTACGTCGGGGACGGGCGCTTCGt                                                                          <  2:4451154/151‑1 (MQ=255)
                                                                          ccTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGtg                                                                         >  2:3275893/1‑151 (MQ=255)
                                                                           cTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGTGCTTCGtgc                                                                        >  1:2854680/1‑151 (MQ=255)
                                                                           cTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGtgc                                                                        >  2:5201391/1‑151 (MQ=255)
                                                                            tGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGtgca                                                                       >  2:6346886/1‑151 (MQ=255)
                                                                               cgcgCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGtgcatgc                                                                    <  2:1587922/151‑1 (MQ=255)
                                                                                    tCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCtt                                                               <  1:4995216/151‑1 (MQ=255)
                                                                                     cGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTc                                                              <  2:3867923/151‑1 (MQ=255)
                                                                                      gACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTcc                                                             >  2:1485501/1‑151 (MQ=255)
                                                                                       aCGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCa                                                            >  2:1151796/1‑151 (MQ=255)
                                                                                        cgcgAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCAc                                                           <  1:5276390/151‑1 (MQ=255)
                                                                                        cgcgAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTGCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCAc                                                           >  1:4928714/1‑151 (MQ=255)
                                                                                          cgAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCg                                                         >  2:607396/1‑151 (MQ=255)
                                                                                          cgAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCg                                                         <  1:1779477/151‑1 (MQ=255)
                                                                                          cgAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCg                                                         <  1:1569182/151‑1 (MQ=255)
                                                                                           gagagaTGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCCTGCACCTTCCACCgg                                                        >  2:6539633/1‑151 (MQ=255)
                                                                                            ggagaTGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGt                                                       <  2:4941573/150‑1 (MQ=255)
                                                                                            agagaTGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGt                                                       >  1:6127826/1‑151 (MQ=255)
                                                                                                        cATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGc                                           <  2:3342993/151‑1 (MQ=255)
                                                                                                           gcgcgcACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTg                                        >  1:797919/1‑151 (MQ=255)
                                                                                                            cgcgcACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTgg                                       >  2:719435/1‑151 (MQ=255)
                                                                                                             gcgcACGGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGa                                      <  2:6393044/151‑1 (MQ=255)
                                                                                                             gcgcACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTggc                                      >  1:1000990/1‑150 (MQ=255)
                                                                                                               gcACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACt                                    <  2:1720781/151‑1 (MQ=255)
                                                                                                                         tGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCaaa                          <  1:180270/151‑1 (MQ=255)
                                                                                                                         tGGATGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCaaa                          >  1:454197/1‑151 (MQ=255)
                                                                                                                           caTGTCAGTTGGGAGCAGTCTGGTGGCCTGGTGTTCGTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACa                        <  1:5630940/150‑1 (MQ=255)
                                                                                                                            aTGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCAcc                                                 >  1:136518/1‑125 (MQ=255)
                                                                                                                            aTGTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAg                       <  1:4005803/151‑1 (MQ=255)
                                                                                                                              gTCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCt                     <  1:358694/151‑1 (MQ=255)
                                                                                                                               tCAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTa                    >  1:1248867/1‑151 (MQ=255)
                                                                                                                                cAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTAc                   >  1:5896821/1‑151 (MQ=255)
                                                                                                                                cAGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTAc                   <  2:3068999/151‑1 (MQ=255)
                                                                                                                                 aGTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAAc                         >  1:5790646/1‑144 (MQ=255)
                                                                                                                                  gTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTACTg                 >  1:2613314/1‑151 (MQ=255)
                                                                                                                                  gTTCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTACTg                 <  1:4325912/151‑1 (MQ=255)
                                                                                                                                    tCGCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTACTggg               <  1:4909634/151‑1 (MQ=255)
                                                                                                                                     cGCTGCAGTCTGGTGTCCTGCTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTACTGGGc              <  1:6156547/151‑1 (MQ=255)
                                                                                                                                      gCTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTACTGGGcc             >  2:5164928/1‑151 (MQ=255)
                                                                                                                                       cTGCAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTACTGGGCCa            >  2:2128504/1‑151 (MQ=255)
                                                                                                                                          cAGTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTACTGGGCCAAgg         <  2:1409425/151‑1 (MQ=255)
                                                                                                                                            gTCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTACTGGGCCAAGGcc       <  2:1900931/151‑1 (MQ=255)
                                                                                                                                             tCTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCCGTCAAACAGCTACTGGGCCAAGGCCt      >  2:506203/1‑151 (MQ=255)
                                                                                                                                              cTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACa                        >  1:3286663/1‑132 (MQ=255)
                                                                                                                                              cTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTACTGGGCCAAGGCCTa     <  1:5702680/151‑1 (MQ=255)
                                                                                                                                              cTGGTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTACTGGGCCAAGGCCTa     <  1:5922479/151‑1 (MQ=255)
                                                                                                                                                ggTGGCCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTACTGGGCCAAGGCCTAcc   <  1:2749581/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GGCAATACGCCGGACTCCGGCTTCGACTGCAGCGGTCTGATCAAGTATGTGTACCGTGATGCTGCTGGCATCAGCCTGCCGCGCTCGACGCGAGAGATGATTGTCATGCGCGCACCGACGGTGGATGTCAGTTCGCTGCAGTCTGGTGACCTGGTGTTCTTCGCCACCAGTGGGGGCTCGCAGGTCAGCCATGCCGGCATCTATGTCGGGGACGGGCGCTTCGTGCATGCACCTTCCACCGGTGGCACCGTACGCTTGGACTACCTGTCAAACAGCTACTGGGCCAAGGCCTACCT  >  CP009974/3535186‑3535481

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑