| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 3,756,668 | C→G | intergenic (+550/+90) | RPPX_16775 → / ← RPPX_16780 | hypothetical protein/phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 3,756,668 | 0 | C | G | 76.2% | 783.2 / 266.1 | 399 | intergenic (+550/+90) | RPPX_16775/RPPX_16780 | hypothetical protein/phospho‑2‑dehydro‑3‑deoxyheptonate aldolase |
| Reads supporting (aligned to +/- strand): ref base C (39/56); new base G (158/146); total (197/202) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 7.76e-02 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 407 total aligned reads displayed.
CAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAGCGACTG > CP009974/3756518‑3756814 | aaaaCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGTCCGTCATCGCCCGCCGCAAGgcc > 1:1003216/1‑151 (MQ=17) aaaaCCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGgcc > 1:4903876/1‑151 (MQ=255) ccGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTgcg < 2:3829693/151‑1 (MQ=255) ccGTCGGCTCCCATCAGCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTgcg < 2:5238397/151‑1 (MQ=255) gTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCt < 1:1809755/151‑1 (MQ=255) gTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCt < 2:3339967/151‑1 (MQ=255) gTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCt < 1:5764925/151‑1 (MQ=255) tCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTc > 1:3636861/1‑151 (MQ=255) cGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCg > 2:2013690/1‑151 (MQ=255) ggCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCgg > 2:236621/1‑151 (MQ=255) tCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCCCTGCACGCCCCATCCACGGGGCCCCACCGCTTGACGGGCATCCATACCCGTCATCTCCCTCCGCAAGGCCGCCGCTAGTcct > 1:3521357/1‑151 (MQ=14) catcatCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGcctcct > 1:1913838/1‑151 (MQ=255) tcatcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGa > 2:4916919/1‑151 (MQ=255) tcatcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCGCCCTTCGCAAGCCCTGCGCTCGGcctgctcc > 1:343525/1‑149 (MQ=255) atcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCCCGCGCTGCAGGCCCCATCCATGGGGCCTCCGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCCAGCCCTGCGCCCGGCCTCCTGaaa > 2:2532926/1‑150 (MQ=14) atcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGacg > 2:5870377/1‑149 (MQ=255) tcCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGt < 2:758127/151‑1 (MQ=255) ggCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGc < 2:448900/151‑1 (MQ=255) gCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCa < 1:1411298/151‑1 (MQ=255) gCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCa > 2:5287287/1‑151 (MQ=255) gtACGCCGCGCTCCGGGGTCCTCTCGCTCCGGCCTCGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTAGGCCTCCTGACGTCGCAATCt < 2:3130393/150‑1 (MQ=14) tACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTg < 1:3867699/151‑1 (MQ=255) tACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCCCCTGAAGTCGGaagcac > 1:2913869/1‑147 (MQ=255) aCGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATGCATGCCCGTCATCTCCCTCCGCACGGCCTGCGCTCGCCCTCCTGAAGTCGCGATCCGc > 2:1626684/1‑151 (MQ=14) gcgcTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTGCTGAAGTCGCAATCTGCGTCGc > 2:3964222/1‑151 (MQ=255) gcTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCt < 2:5689378/151‑1 (MQ=255) gcTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCt > 1:6444856/1‑151 (MQ=255) cTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCCTGGGGCCTCAGCGCTTGACGGGCGTCACTGCCCGCCCTCTCCCTCCGCAGGGCCTGCGCGCGGCCTCCCGAAGTCGCACTCTGCGTCGccgg > 2:2742883/1‑149 (MQ=14) cTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTg < 1:2553882/151‑1 (MQ=255) cGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAAc > 1:809486/1‑151 (MQ=255) cGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAAc < 1:55137/151‑1 (MQ=255) ggTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGCAGTCGCAAGCTGCGCCGCCTGAACCAc > 1:1536318/1‑151 (MQ=11) gTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGACCAAcc > 1:52339/1‑151 (MQ=255) ccccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACcgc < 1:973320/151‑1 (MQ=255) ccccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACcgc < 1:759808/151‑1 (MQ=255) cccTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACcgcg < 1:4744330/151‑1 (MQ=255) ccTCGCTCCGGCCTTGCCCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACcgcgc < 1:3073101/151‑1 (MQ=255) cTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACcgcgcg < 1:4245688/151‑1 (MQ=255) tCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCACGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCgcgcgc > 2:841200/1‑151 (MQ=255) gCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCtt > 1:2030132/1‑151 (MQ=255) tCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCGATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAg < 2:2283996/151‑1 (MQ=255) tCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAg < 1:2207371/151‑1 (MQ=255) cGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGaa < 1:6507799/151‑1 (MQ=255) cGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGaa > 2:4170416/1‑151 (MQ=255) cGGCCTTGCTCCCGGGAGCACCCGCTGCAGGCCCCATCCATGGAGCCTCAGCGCTTGACGGGCATACATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGaa < 2:1918110/151‑1 (MQ=11) ccTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCa > 1:510291/1‑151 (MQ=255) cTTGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCaa > 2:3195409/1‑151 (MQ=255) ttGCTCCCGGGAGCACGCGCTGCGGGCCCCGTCCAGGGGGCCTCAGCGCTGGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAg < 2:473439/151‑1 (MQ=14) ttGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAg > 1:1470868/1‑151 (MQ=255) ttGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTCGCAGCAAg > 2:6196538/1‑151 (MQ=11) ttGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAg < 1:5343575/144‑1 (MQ=255) tGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGa < 2:3494896/151‑1 (MQ=255) tGCTCCCGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGa < 1:6167982/151‑1 (MQ=255) cgcccGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATc < 1:5625630/149‑1 (MQ=255) ccGGGAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaa < 1:1179924/151‑1 (MQ=255) gggAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaag < 1:3700852/151‑1 (MQ=255) gggAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaag > 1:4476523/1‑151 (MQ=255) ggAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaagc < 1:4658019/151‑1 (MQ=255) ggAGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagc < 1:1736397/151‑1 (MQ=255) aGCACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcga > 1:594348/1‑151 (MQ=255) aGCACGCGATACAGGCCCCATCCACGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaagcga < 1:4975436/151‑1 (MQ=17) cACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCCTAGAAGCAAGATCaaaagcgaga > 2:6525385/1‑149 (MQ=255) cACGCGCTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCCCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaga < 1:441035/151‑3 (MQ=255) cgcgCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaag > 1:2462018/1‑151 (MQ=255) gcgcTGCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagc < 1:2823426/151‑1 (MQ=255) gcTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcga > 2:5923131/1‑151 (MQ=255) gCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcgaatt > 2:6391878/1‑149 (MQ=255) gCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCCTCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGCAGTCGCAATCTGCCTCGCCTGAACTACCGCGCGCTTAGCAGCACGATCaaaagcgaaaagcgaaaa > 2:4599368/1‑151 (MQ=14) gCAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaaaagcgaaaa > 1:3977054/1‑151 (MQ=255) cAGGCCCCATCCGTGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaaaagcgaaaag < 2:5423607/151‑1 (MQ=255) cAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaaaagcgaaaag > 1:5699640/1‑151 (MQ=255) cAGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCaaaagcgaaa > 2:371531/1‑142 (MQ=255) aGGCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcgaattcg < 1:5317854/151‑5 (MQ=255) gCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGGACTACCGCGCGCTTAGAAGCAAGATCaaaagcgagaagcgaattcggt < 2:3628162/151‑7 (MQ=17) gCCCCATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAgcgc > 1:5834126/1‑151 (MQ=255) ccccATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCt > 1:3987214/1‑151 (MQ=255) cccATCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTc < 2:4405166/151‑1 (MQ=255) ccatCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCa > 1:1086992/4‑151 (MQ=255) ccatCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCa > 2:4351490/4‑151 (MQ=255) atCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAgc > 1:3752514/2‑151 (MQ=255) ccATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGAGCAAAAGCGAAAAGCGAAAAGCGCTCAgcgc > 2:2823464/1‑151 (MQ=255) cATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGcgcc < 2:1086992/151‑1 (MQ=255) tGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGcgccgc > 1:604925/1‑151 (MQ=255) ggggCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCa > 1:4139988/1‑151 (MQ=255) ccTCGGCGCTTGACGGGCACCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAACGAAAAGCGAAAAGCGCTCAGCGCCGCACCTg < 1:3206903/151‑1 (MQ=255) ccTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTg > 1:833179/1‑151 (MQ=255) cAGCGCTGGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCtt < 2:4029521/151‑1 (MQ=255) agggaggtGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCtt < 2:4559773/144‑1 (MQ=255) cgcTTGACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAg > 1:1241533/1‑151 (MQ=255) gACGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGttt < 2:2926961/151‑1 (MQ=255) aCGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTc < 2:3057336/151‑1 (MQ=255) cGGGCATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCg > 2:2067183/1‑151 (MQ=255) cATCCATGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCaa < 2:5097846/151‑1 (MQ=255) tCCATGCCCGTCATCTCCCGCCGCGAGGCCGGCGCTCGGCCTCCTGAAGTCGCAATCTGCGGCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATc < 2:6073676/151‑1 (MQ=25) tGCCCGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGa < 2:6348948/151‑1 (MQ=255) ccGTCATCTCCCTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATg > 2:1504149/1‑151 (MQ=255) agctcACTCCGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAAAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGACGCACCTGCTTGAGGGTATCGGCAATAAGGAATGCCAAc < 2:1208956/149‑1 (MQ=25) ctccctccGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTc < 2:2995202/151‑1 (MQ=255) ctccGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAGc < 2:1697797/148‑1 (MQ=255) ccGCAAGGCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCACTCAGGAATGCCAACTCCAGCGa > 1:1836216/2‑151 (MQ=255) | CAAAAACCGTCGGCTCCCATCATCCGGCCCCTACGCTGCGCTCCGGGGTCCCCTCGCTCCGGCCTTGCTCCCGGGAGCACGCGCTGCAGGCCCCGTCCATGGGGCCTCAGCGCTTGACGGGCATCCATGCCCGTCATCTCCCTTCGCAAGCCCTGCGCTCGGCCTCCTGAAGTCGCAATCTGCGTCGCCTGAACTACCGCGCGCTTAGAAGCAAGATCAAAAGCGAAAAGCGAAAAGCGCTCAGCGCCGCACCTGCTTGAGGGTTTCGGCAATCAGGAATGCCAACTCCAGCGACTG > CP009974/3756518‑3756814 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |