Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 3,961,904 C→T T416T (ACC→ACT)  RPPX_17635 → damage‑inducible protein CinA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099743,961,9040CT100.0% 1125.4 / NA 307T416T (ACC→ACT) RPPX_17635damage‑inducible protein CinA
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (139/168);  total (139/168)

Only 100 of 313 total aligned reads displayed.

ACCCGGTGGAAATCGCCCGCGCCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACCTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGATTTCTTTTCCGTGGGGCC  >  CP009974/3961756‑3962051
                                                                                                                                                    |                                                                                                                                                   
aCCCGGTGGAAATCGCCCGCGCCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACttc                                                                                                                                                   >  1:619829/1‑151 (MQ=255)
    ggTGGAAATCGCCCGCGCCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTg                                                                                                                                               <  1:119087/151‑1 (MQ=255)
    ggTGGAAATCGCCCGCGCCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTg                                                                                                                                               <  1:6533127/151‑1 (MQ=255)
    ggTGGAAATCGCCCGCGCCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTg                                                                                                                                               >  1:1718455/1‑151 (MQ=255)
       ggAAATCGCCCGCGCCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTg                                                                                                                                            >  2:1772219/1‑151 (MQ=255)
          aaTCGCCCGCGCCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGGGCTTTCCCGGAAGCCACCTTCAACTGGGCCGTGCTCCCTTCCCTGGTGATc                                                                                                                                         >  1:5436725/1‑151 (MQ=18)
             cGCCCGCGCCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACt                                                                                                                                      <  1:5969995/151‑1 (MQ=255)
             cGCCCGCGCCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACt                                                                                                                                      <  1:3374076/151‑1 (MQ=255)
                ccGCGCCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTgcg                                                                                                                                   <  1:5230732/151‑1 (MQ=255)
                 cgcgCCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCCGGTGATCACTgcgc                                                                                                                                  >  1:629526/1‑151 (MQ=255)
                  gcgcCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCt                                                                                                                                 <  2:3012188/151‑1 (MQ=255)
                    gcCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTgg                                                                                                                               >  1:5586970/1‑151 (MQ=255)
                      cTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCa                                                                                                                             >  1:3172019/1‑151 (MQ=255)
                             cTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGa                                                                                                                      >  1:1313323/1‑151 (MQ=255)
                               ggggCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACg                                                                                                                    <  1:5343182/151‑1 (MQ=255)
                                gggCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCActgct                                                                                                                        >  1:65933/1‑146 (MQ=255)
                                gggCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACgg                                                                                                                   <  1:1046091/151‑1 (MQ=255)
                                gggCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACgg                                                                                                                   >  1:2150126/1‑151 (MQ=255)
                                 ggCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACggg                                                                                                                  >  1:63262/1‑151 (MQ=255)
                                  gCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGgc                                                                                                                 <  2:6144290/151‑1 (MQ=255)
                                   cggCCTGTGCGCCGGCTGGGCCCGCGGGTGGCTTCCGCCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGgcg                                                                                                                <  2:3182930/149‑1 (MQ=14)
                                   cAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGgcg                                                                                                                >  2:3765911/1‑151 (MQ=255)
                                    aGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGgcgc                                                                                                               <  1:4464661/151‑1 (MQ=255)
                                      ccTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCt                                                                                                             <  1:1261867/151‑1 (MQ=255)
                                       cggggCACGTGAGGAGCCCGCGTGTGGCTTCCACCTTGTTGCGGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCtt                                                                                                            <  2:6327813/147‑1 (MQ=14)
                                       cTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCtt                                                                                                            <  1:1626967/151‑1 (MQ=255)
                                         gtgCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGt                                                                                                          >  1:4052871/1‑151 (MQ=255)
                                          ggCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTc                                                                                                         <  2:4053406/150‑1 (MQ=255)
                                           gCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGCCGGGCGCCTTGTcc                                                                                                        >  1:4646051/1‑151 (MQ=255)
                                           gCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTcc                                                                                                        <  1:4739221/151‑1 (MQ=255)
                                            cACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCt                                                                                                       <  2:5215984/151‑1 (MQ=255)
                                                tgatgaGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCAt                                                                                                   >  1:1067235/1‑151 (MQ=255)
                                                 gatgaGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATg                                                                                                  <  1:2273397/151‑1 (MQ=255)
                                                    gaGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGtt                                                                                               >  2:6451583/1‑151 (MQ=255)
                                                       cccGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCCCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGa                                                                                            >  1:330144/1‑151 (MQ=255)
                                                         cGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAg                                                                                          >  2:3472569/1‑151 (MQ=255)
                                                             ggtggCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACt                                                                                      <  2:2785824/151‑1 (MQ=255)
                                                             ggtggCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACt                                                                                      <  1:1975007/151‑1 (MQ=255)
                                                              gtggCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTc                                                                                     <  1:2207482/151‑1 (MQ=255)
                                                               tggCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCa                                                                                    <  2:727790/151‑1 (MQ=255)
                                                                ggCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAg                                                                                   <  1:2422198/151‑1 (MQ=255)
                                                                  cTTCCACCTGGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAggg                                                                                 >  1:2711144/1‑151 (MQ=25)
                                                                   ttCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAATCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTTTCCTGCATGCTTTGAAGCCCTCATGgc                                                                                >  1:1665134/1‑151 (MQ=11)
                                                                    tCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCCTGGTTTGAAGCACTCAGGgcg                                                                               >  2:3322647/1‑151 (MQ=255)
                                                                       aCCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGcgccg                                                                            <  1:634337/151‑1 (MQ=21)
                                                                        ccTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGcgccgc                                                                           <  2:2596170/151‑1 (MQ=18)
                                                                         cTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCt                                                                          >  2:1849094/1‑151 (MQ=18)
                                                                          ttgttgCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTCCATGGTTTGAAGCACTCAGGGCGCCGCTc                                                                         >  2:86789/1‑151 (MQ=18)
                                                                            gttgCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCgg                                                                       <  1:1476027/151‑1 (MQ=18)
                                                                             ttgCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGgc                                                                      <  2:235589/151‑1 (MQ=18)
                                                                                cTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCTCTCGGCGcc                                                                   <  1:3911674/151‑1 (MQ=21)
                                                                                  ggtggGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGcccc                                                                 <  2:4518101/151‑1 (MQ=25)
                                                                                  ggtggGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGcccc                                                                 >  1:2029920/1‑151 (MQ=25)
                                                                                   gtggGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTTAAGCACTCAGGGCGCCGCGCGGCGccccc                                                                >  1:1164138/1‑150 (MQ=255)
                                                                                      ggCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTg                                                             >  2:3949645/1‑151 (MQ=255)
                                                                                      ggCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTg                                                             <  1:4250804/151‑1 (MQ=255)
                                                                                        cATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGAc                                                           <  2:1203618/151‑1 (MQ=255)
                                                                                         aTGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACt                                                          <  2:5586970/151‑1 (MQ=255)
                                                                                         aTGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACt                                                          >  1:4366724/1‑151 (MQ=255)
                                                                                          tGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTc                                                         <  1:796908/151‑1 (MQ=255)
                                                                                             tCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCAcc                                                      <  1:4971706/151‑1 (MQ=255)
                                                                                             gcGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCAcc                                                      <  2:4691059/150‑1 (MQ=255)
                                                                                               gACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCa                                                    >  2:65832/1‑151 (MQ=255)
                                                                                                 cAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAg                                                  <  1:175033/151‑1 (MQ=255)
                                                                                                 cAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAg                                                  <  2:3107393/151‑1 (MQ=255)
                                                                                                   gggATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGaa                                                >  2:3560712/1‑151 (MQ=255)
                                                                                                   gggATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGAGCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCATGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGaa                                                >  2:505713/1‑151 (MQ=255)
                                                                                                     gATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGaaca                                              >  1:5107210/1‑151 (MQ=255)
                                                                                                        atCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCCCCCCAGaacaaca                                           >  1:4823464/1‑151 (MQ=255)
                                                                                                        atCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGaacacca                                           >  2:809582/1‑151 (MQ=255)
                                                                                                        atCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGaacaaca                                           <  2:4600883/151‑1 (MQ=255)
                                                                                                         tCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGaacaacaa                                          >  2:6022086/1‑151 (MQ=255)
                                                                                                          cGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGaacaacaac                                         <  1:4064236/151‑1 (MQ=255)
                                                                                                             tGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTCACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACaga                                      <  2:3901562/151‑1 (MQ=255)
                                                                                                              gATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACagag                                     >  1:3437484/1‑151 (MQ=255)
                                                                                                              gATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACagag                                     >  1:3702401/1‑151 (MQ=255)
                                                                                                                 ttCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTaa                                  >  2:3198789/1‑151 (MQ=255)
                                                                                                                   ccAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAAcc                                <  2:3261956/151‑1 (MQ=255)
                                                                                                                    cAGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACca                               <  2:5674009/151‑1 (MQ=255)
                                                                                                                     aGAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACcat                              >  1:3779156/1‑151 (MQ=255)
                                                                                                                      gAAAGCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACcatc                             <  1:3558717/151‑1 (MQ=255)
                                                                                                                        aggCCACGTTCAAGTGGGCCGTGCTCACTGCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTGCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACcatcat                           <  2:6250238/149‑1 (MQ=255)
                                                                                                                          gCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGt                         >  1:6126967/1‑151 (MQ=255)
                                                                                                                          gCCACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGt                         <  2:1935786/151‑1 (MQ=255)
                                                                                                                           ccACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTc                        <  2:5343130/151‑1 (MQ=255)
                                                                                                                           ccACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTc                        >  2:509325/1‑151 (MQ=255)
                                                                                                                            cACCTTCAAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTcc                       <  2:6210337/151‑1 (MQ=255)
                                                                                                                                ttCGAGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCGTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGAt                   <  2:3885102/151‑1 (MQ=255)
                                                                                                                                   aaGTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGATTTc                >  2:2888731/1‑151 (MQ=255)
                                                                                                                                     gTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCCCTCAGGGCGCCCCTCGGCGCCCCTCTGACTCACCCAAGCACAACAACGCAGTAACCATCATGCCCCGATCTCtt              >  2:5714870/1‑151 (MQ=18)
                                                                                                                                     gTGGGCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGATTTCtt              >  2:14312/1‑151 (MQ=255)
                                                                                                                                        ggCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGATTTCTTTTc           <  1:259377/151‑1 (MQ=255)
                                                                                                                                        ggCCGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGATTTCTTTTc           <  2:4887659/151‑1 (MQ=255)
                                                                                                                                          ccGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGATTTCTTTTCCg         >  2:1069505/1‑151 (MQ=255)
                                                                                                                                          ccGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGATTTCTTTTCCg         <  1:568202/151‑1 (MQ=255)
                                                                                                                                           cGTGCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGATTTCTTTTCCGt        <  1:5475767/151‑1 (MQ=255)
                                                                                                                                              gCTCACTTCTCTGGTGATCACTGCGCTGGGACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGATTTCTTTTCCGTggg     <  2:5426565/151‑1 (MQ=255)
                                                                                                                                              gCTCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGATTTCTTTTCCGTggg     <  1:3222830/151‑1 (MQ=255)
                                                                                                                                                tCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGCAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGATTTCGTTTCCGTCGGGc   >  1:3025768/1‑151 (MQ=255)
                                                                                                                                                tCACTTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGATTTCTTTTCCGTGGGGc   <  2:5934029/151‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
ACCCGGTGGAAATCGCCCGCGCCTCGGTGCTGGGGCAGCCTGTGCACCTGATGAGCCCGCTGGTGGCTTCCACCTTGTTGCTGGTGGGCATGGTCGACAGGGATATCGGTGATTTCCAGAAAGCCACCTTCAAGTGGGCCGTGCTCACCTCTCTGGTGATCACTGCGCTGGCACTGCTGACGGGCGCCTTGTCCTTCATGGTTTGAAGCACTCAGGGCGCCGCTCGGCGCCCCTCTGACTCACCCAAGAACAACAACAGAGTAACCATCATGTCCCGATTTCTTTTCCGTGGGGCC  >  CP009974/3961756‑3962051

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑