BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	4,540,058	T→C	A592A (GCA→GCG)	RPPX_20280 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	4,540,058	0	T	C	100.0%	747.0 / NA	221	A592A (GCA→GCG)	RPPX_20280	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (116/105); total (116/105)

Only 100 of 221 total aligned reads displayed.

ACCACCGCCCGAGGTGAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGTGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCAACACTTGCTGGCGC  >  CP009974/4539941‑4540205

cccaccGCCCGAGGTGAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACctct                                                                                                                    <  2:1187134/150‑1 (MQ=11)

  caccGCCCGAGGTGAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTg                                                                                                                  <  2:3600763/151‑1 (MQ=14)

  caccGCCCGAGGTGAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTg                                                                                                                  <  1:6247910/151‑1 (MQ=14)

      gCCCGAGGTGAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTa                                                                                                              <  2:1825483/151‑1 (MQ=17)

      gCCCGAGGTGAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTa                                                                                                              >  2:2139904/1‑151 (MQ=17)

       cccGAGGTTAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCATCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTTCTCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTaa                                                                                                             >  1:658697/1‑151 (MQ=255)

       cccGAGGTGAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTaa                                                                                                             <  1:2966444/151‑1 (MQ=17)

       cccGAGGTGAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTaa                                                                                                             <  1:2717562/151‑1 (MQ=17)

         cGAGGTGAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAAt                                                                                                           <  2:286624/151‑1 (MQ=18)

          gAGGTGAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATg                                                                                                          >  2:2694858/1‑151 (MQ=18)

           aGGTGAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATgg                                                                                                         >  1:1870906/1‑151 (MQ=21)

              tcaGCACCCCAACGGAGGTGGGTTTCACACGCGCAGTGGTGGTCAGCACGATAGACACCGTGCGACTAACCGAGATGCGCAACGCTTTAATCACTCCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGAtt                                                                                                      <  2:4592081/149‑1 (MQ=11)

              tGAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGAtt                                                                                                      <  2:2222509/151‑1 (MQ=25)

               gAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGAttt                                                                                                     >  2:5918612/1‑151 (MQ=18)

                aGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGAtttt                                                                                                    >  1:1635361/1‑151 (MQ=21)

                 gCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTc                                                                                                   <  1:4067304/151‑1 (MQ=21)

                 gCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTc                                                                                                   <  1:3205174/151‑1 (MQ=25)

                  cAACCCAAGGAAGTTGGGTTTGACACGCTCAGTGGTGGTCCGCTCTATCGACACTGTGCGGCGACCCGAGGTGCGCAACGGTTTCATCTCTTCAAACTGCGCCATGACGCTCTCCAAATACCGCTGCAGCTCTTGGGTAAACGGGTTTTcc                                                                                                  >  2:617110/1‑151 (MQ=11)

                  cAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTcc                                                                                                  >  1:3887973/1‑151 (MQ=25)

                     cccAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCttt                                                                                               <  2:2302080/151‑1 (MQ=38)

                      ccAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTa                                                                                              <  1:2192376/151‑1 (MQ=38)

                      ccAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTa                                                                                              <  1:5610612/151‑1 (MQ=255)

                        aaGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATg                                                                                            <  1:1106545/151‑1 (MQ=255)

                               ttGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGc                                                                                          >  2:5171718/1‑146 (MQ=255)

                                  ggTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCgg                                                                                  <  1:243994/151‑1 (MQ=255)

                                  ggTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCgg                                                                                  >  2:5562953/1‑151 (MQ=255)

                                   gTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGt                                                                                 >  1:5596644/1‑151 (MQ=255)

                                   gTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGt                                                                                 <  1:1839733/151‑1 (MQ=255)

                                     ttCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGTCCTTTTCGGTGa                                                                               >  2:4883242/1‑151 (MQ=255)

                                       cacaCGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTCTGGCCTGTTCGGTGAtt                                                                             >  2:6400536/1‑151 (MQ=255)

                                        ccacGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTc                                                                            <  2:4335185/150‑1 (MQ=255)

                                         cacGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCg                                                                           <  2:6487031/151‑1 (MQ=255)

                                          acGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGa                                                                          >  1:3905560/1‑151 (MQ=255)

                                           cgcgCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGAt                                                                         <  1:3368383/151‑1 (MQ=255)

                                              gcAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAgc                                                                      <  2:3028208/151‑1 (MQ=255)

                                               cAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTTGATAgcg                                                                     >  1:2029078/1‑151 (MQ=255)

                                                aGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAgcgc                                                                    >  1:4139263/1‑151 (MQ=255)

                                                 gtggtgGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAgcgcg                                                                   >  2:4172102/1‑151 (MQ=255)

                                                 gtggtgGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAgcgcg                                                                   <  1:5110101/151‑1 (MQ=255)

                                                   ggtggtCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGcgcc                                                                 >  2:2731754/1‑151 (MQ=255)

                                                     tggtCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGcgccgc                                                               >  1:3949158/1‑151 (MQ=255)

                                                     tggtCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGcgccgc                                                               >  2:6239195/1‑151 (MQ=255)

                                                      ggtGAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCAGCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCgccgcc                                                              <  2:6287521/151‑1 (MQ=255)

                                                      ggtCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCgccgcc                                                              <  1:2524271/151‑1 (MQ=255)

                                                        tCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAg                                                            >  1:2378758/1‑151 (MQ=255)

                                                        tCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAg                                                            >  1:634134/1‑151 (MQ=255)

                                                          aGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCa                                                          >  1:4897675/1‑151 (MQ=255)

                                                           gCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCaa                                                         >  1:2790522/1‑151 (MQ=255)

                                                            cTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTCTGGCCTGTTCGGTGATTCGATAGCGCGCCGCCCGCCAc                                                        >  2:4448975/1‑151 (MQ=255)

                                                            cTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAAc                                                        <  1:5487701/151‑1 (MQ=255)

                                                            cTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAAc                                                        >  1:24546/1‑151 (MQ=255)

                                                             tCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAAcc                                                       >  1:4092056/1‑151 (MQ=255)

                                                               gATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAAcccc                                                     >  2:2696252/1‑151 (MQ=255)

                                                               gATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAAcccc                                                     >  2:5657330/1‑151 (MQ=255)

                                                                 tAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAg                                                   >  2:1413355/1‑151 (MQ=255)

                                                                 aggACGCCGTGCGGCTAGCCGAGATGGGCAACGCGTTCATCTCTTCAACCTGCGCCAGGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCGTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAg                                                   <  2:5313111/149‑1 (MQ=14)

                                                                   gACACCGTGCGGCTACCCGACATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTg                                                 <  2:3418467/151‑1 (MQ=255)

                                                                     cacCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCt                                               >  2:2025313/1‑151 (MQ=255)

                                                                      acCGTGCGGCTACCCTAGATGCTCAACGCTTTGATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATTCCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCtt                                              <  1:4574708/151‑1 (MQ=255)

                                                                      acCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCtt                                              >  1:3844910/1‑151 (MQ=255)

                                                                      acCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCtt                                              >  1:4540892/1‑151 (MQ=255)

                                                                      acCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCtt                                              >  1:5050969/1‑151 (MQ=255)

                                                                        cGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTtc                                            >  1:925981/1‑151 (MQ=255)

                                                                        cGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTtc                                            >  1:5650716/1‑151 (MQ=255)

                                                                          cccGGCTACCCGAGATGCGCAACGCCTTCACCTCTTCAGCCTGCGCCATGCCGCTCTTTAAATACAGCTGCACCTCTTGGCTAAATGGATTTTCCATGATCGCCTGTTCGGTGAATCGATAGCGCGCCGCCAGCAGCCCCAGTGCTTtctc                                          <  2:3724296/149‑1 (MQ=14)

                                                                             ggCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGc                                       <  1:1713920/151‑1 (MQ=255)

                                                                             ggCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGc                                       >  2:1875583/1‑151 (MQ=255)

                                                                             ggCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGc                                       <  1:2022946/151‑1 (MQ=255)

                                                                               cTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTTGGCAt                                     >  1:5539006/1‑151 (MQ=255)

                                                                                 aCCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTc                                   <  1:5122250/151‑1 (MQ=255)

                                                                                 aCCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTc                                   <  2:5882085/151‑1 (MQ=255)

                                                                                  cccGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCg                                  >  2:4643782/1‑151 (MQ=255)

                                                                                   ccGAGATGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGCCATTCGc                                 >  2:4209300/1‑151 (MQ=255)

                                                                                     gagaTGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGccc                               >  1:601109/1‑150 (MQ=255)

                                                                                     gagaTGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGccc                               >  2:1458512/1‑150 (MQ=255)

                                                                                     gagaTGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGAGTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCTAGCAACCCCAGTGCTTTCTCGGCCTTCGCCt                               >  2:5116838/1‑151 (MQ=255)

                                                                                      agaTGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTc                              >  1:206236/1‑151 (MQ=255)

                                                                                      agaTGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTc                              <  2:4825918/151‑1 (MQ=255)

                                                                                       gaTGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCa                             >  1:3770109/1‑151 (MQ=255)

                                                                                       gaTGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCa                             >  2:3964237/1‑151 (MQ=255)

                                                                                        aTGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCAc                            >  1:330053/1‑151 (MQ=255)

                                                                                         tGCGCAACGCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCAcg                           <  2:1994326/151‑1 (MQ=255)

                                                                                            gcAACGCTTTCATCTCTTAAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACgcgc                        <  1:3457956/151‑1 (MQ=255)

                                                                                                 gCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCa                   >  1:3323992/1‑151 (MQ=255)

                                                                                                 gCTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCACTGCTTTCTCGGCATTCGCCTCACGCGCTGccc                   >  2:5316095/1‑150 (MQ=255)

                                                                                                  cTTTCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAg                  <  1:2694858/151‑1 (MQ=255)

                                                                                                    ttCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCa                <  2:3381048/151‑1 (MQ=255)

                                                                                                     tCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCaa               <  1:1431534/151‑1 (MQ=255)

                                                                                                     tCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCaa               >  1:5211250/1‑151 (MQ=255)

                                                                                                     tCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCaa               <  1:4308275/151‑1 (MQ=255)

                                                                                                     tCATCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCaa               >  1:3574935/1‑151 (MQ=255)

                                                                                                       aTCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAgc                                                                      <  2:1720175/94‑1 (MQ=255)

                                                                                                       aTCTCTTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCAaca             <  1:626610/151‑1 (MQ=255)

                                                                                                          tctTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCAACACtt          <  1:5840686/151‑1 (MQ=255)

                                                                                                           ctTCAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCAACACTTg         <  1:447057/151‑1 (MQ=255)

                                                                                                              cAACCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCAACACTTGCTg      >  1:866974/1‑151 (MQ=255)

                                                                                                               aaCCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCCCCTCACGCGCTGCCAGCAACCCTTGCTgg     >  2:6076810/1‑151 (MQ=255)

                                                                                                                aCCTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCAACACTTGCTGgc    <  1:155141/151‑1 (MQ=255)

                                                                                                                 ccTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCAACACTTGCTTgcg   >  2:653709/1‑151 (MQ=255)

                                                                                                                 ccTGCGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCAACACTTGCTGgcg   <  1:4346265/151‑1 (MQ=255)

ACCACCGCCCGAGGTGAGCAACCCAAGGAAGTTGGGTTTCACACGCGCAGTGGTGGTCAGCTCGATAGACACCGTGCGGCTACCCGAGATGCGCAACGCTTTCATCTCTTCAACCTGTGCCATGCCGCTCTTCAAATACCGCTGCACCTCTTGGCTAAATGGATTTTCCTTTATGGCCTGTTCGGTGATTCGATAGCGCGCCGCCAGCAACCCCAGTGCTTTCTCGGCATTCGCCTCACGCGCTGCCAGCAACACTTGCTGGCGC  >  CP009974/4539941‑4540205

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`