BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	4,543,776	C→G	K449N (AAG→AAC)	RPPX_20290 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	4,543,776	0	C	G	100.0%	410.9 / NA	151	K449N (AAG→AAC)	RPPX_20290	hypothetical protein
Reads supporting (aligned to +/- strand): ref base C (0/0); new base G (75/76); total (75/76)

Only 100 of 151 total aligned reads displayed.

CACTTAATCTCAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAAGCCGTCTTGAGCGATAGGATGTTGAACCACAGCATCCCCGCGTTTAAACCACCACCACCGCCCGAGGTGAGCAACCCAAGGAAGTTGGGT  >  CP009974/4543631‑4543860

 aCTTAATCTCAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGc                                                                                <  1:4732060/151‑1 (MQ=255)

  cTTAATCTCAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCg                                                                               <  2:2543403/151‑1 (MQ=255)

   ttAATCTCAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGa                                                                              >  1:3264552/1‑151 (MQ=255)

   ttAATCTCAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGa                                                                              <  2:4724520/151‑1 (MQ=255)

    tAATCTCAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGAt                                                                             <  1:3762340/151‑1 (MQ=255)

    tAATCTCAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGAt                                                                             <  2:4123062/151‑1 (MQ=255)

     aaTCTCAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATa                                                                            >  1:74699/1‑151 (MQ=255)

      aTCTCAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATaa                                                                           <  2:3111100/151‑2 (MQ=255)

      aTCTCAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATaa                                                                           <  1:4519927/151‑2 (MQ=255)

      aTCTCAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATaa                                                                           <  1:378970/151‑2 (MQ=255)

       tctcAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATaag                                                                          >  1:4801485/1‑149 (MQ=255)

       tctcAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATaag                                                                          <  1:2872412/151‑3 (MQ=255)

         tcAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGAt                                                                        <  2:199508/151‑1 (MQ=255)

          cAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATg                                                                       >  1:6034972/1‑151 (MQ=255)

          cAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATg                                                                       >  1:6035005/1‑151 (MQ=255)

           aGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCCCCCCGAACCCAGATGAAGCGAACCCCAGGGTGTACTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATCAGATGt                                                                      >  2:6381561/1‑151 (MQ=14)

           aGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGt                                                                      <  1:5939499/151‑1 (MQ=255)

           aGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGt                                                                      >  2:383893/1‑151 (MQ=255)

             cATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTg                                                                    >  2:1970475/1‑151 (MQ=255)

              aTGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGa                                                                   <  1:2497856/151‑1 (MQ=255)

              aTGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGa                                                                   <  1:278536/151‑1 (MQ=255)

                gACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAAc                                                                 <  2:1041658/151‑1 (MQ=255)

                 aCGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAAcc                                                                >  2:5404216/1‑151 (MQ=255)

                 aCGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGGTGTAGGCCGTGTTGAGCGATAAGATGTTGAAcc                                                                >  1:5922221/1‑151 (MQ=255)

                  cGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACca                                                               <  1:1680605/151‑1 (MQ=255)

                   ggCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACcac                                                              >  1:3667734/1‑151 (MQ=255)

                   ggCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACcac                                                              <  1:5483176/151‑1 (MQ=255)

                   ggCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCAGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTGCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACcac                                                              >  2:6313739/1‑151 (MQ=14)

                    gCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACcaca                                                             <  2:4053490/151‑1 (MQ=255)

                    gCCGTATGCGTTGCCCGCACGCTGACCAGTGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGGTGAACcaca                                                             <  2:3002553/151‑1 (MQ=14)

                     ccTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAg                                                            <  1:6223267/151‑1 (MQ=255)

                     ccTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCCGTTGTAGGCCGTGGTGAGCGATAAGATGTTGAACcacac                                                            >  2:3849087/1‑150 (MQ=14)

                       ttATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCa                                                          >  1:2484990/1‑151 (MQ=255)

                        tATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCAt                                                         >  1:1147389/1‑151 (MQ=255)

                         aTGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATc                                                        >  2:5954677/1‑151 (MQ=255)

                         aTGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATc                                                        >  1:4415169/1‑151 (MQ=255)

                         aTGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATc                                                        >  1:5720487/1‑151 (MQ=255)

                         aTGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATc                                                        <  2:2525004/151‑1 (MQ=255)

                          tGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATcc                                                       <  1:3092638/151‑1 (MQ=255)

                           gCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATccc                                                      <  1:2236269/151‑1 (MQ=255)

                           gCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATccc                                                      <  1:2235026/151‑1 (MQ=255)

                           gCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATccc                                                      <  1:1362283/151‑1 (MQ=255)

                            cGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATccct                                                     >  1:2437378/1‑150 (MQ=255)

                            cGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATccct                                                     <  1:2331315/151‑2 (MQ=255)

                            cGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATccct                                                     <  2:24915/151‑2 (MQ=255)

                            cGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATccct                                                     <  2:3135824/151‑2 (MQ=255)

                             gTTGCCCGCGCGCTGACCAATGTCGGTGCCGCTGGGCCAATCACCCCGAACGCAGGTGAGGCGGCCCCGACGGTGTATTCCGGTGCGTCGCTCTTCTGCGGGCTGTTGGAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATccctg                                                    <  2:5503475/151‑3 (MQ=11)

                              ttGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCtgc                                                   <  2:3323455/151‑1 (MQ=255)

                               tGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGt                                                                      <  1:1269066/131‑1 (MQ=255)

                               tGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCtgcg                                                  >  1:3282050/1‑151 (MQ=255)

                               tGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGGGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGt                                                                      >  2:1269066/1‑131 (MQ=255)

                                gCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGGACCACAGCATcccttcgt                                                 >  1:2108382/1‑146 (MQ=14)

                                gCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGt                                                 <  2:4709685/151‑1 (MQ=255)

                                 cccGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGtt                                                >  1:2006749/1‑151 (MQ=255)

                                  ccGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGttt                                               <  1:5756383/151‑1 (MQ=11)

                                  ccGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGttt                                               >  1:3991068/1‑151 (MQ=255)

                                  ccGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGttt                                               >  1:6487043/1‑151 (MQ=255)

                                      aCGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAac                                           >  1:3504515/1‑151 (MQ=255)

                                       cGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAacc                                          <  2:1136376/151‑1 (MQ=11)

                                       cGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAacc                                          >  1:4936606/1‑151 (MQ=11)

                                       cGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAacc                                          <  2:5737181/151‑1 (MQ=11)

                                         cTGACCAATGTCGCTGCCGCTGCGACAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAaccac                                        <  1:587787/151‑1 (MQ=11)

                                          tGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAaccacc                                       <  1:3698679/151‑1 (MQ=11)

                                           gACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAaccacca                                      >  1:1591460/1‑151 (MQ=255)

                                             ccAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAaccaccacc                                    <  2:2291814/151‑1 (MQ=11)

                                              cAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAaccaccacca                                   <  2:3274997/151‑1 (MQ=11)

                                               aaTGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAaccaccaccac                                  <  1:4337655/151‑1 (MQ=255)

                                                aTGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAaccaccaccacc                                 >  2:5955791/1‑151 (MQ=255)

                                                aTGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAaccaccaccacc                                 >  1:623163/1‑151 (MQ=11)

                                                  gTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGc                               <  1:629046/151‑1 (MQ=11)

                                                   tCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGcc                              <  1:5619847/151‑1 (MQ=255)

                                                   tCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGcc                              <  1:5619804/151‑1 (MQ=11)

                                                   tCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGcc                              >  1:4545770/1‑151 (MQ=11)

                                                   tCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGcc                              >  1:979306/1‑151 (MQ=255)

                                                      ctgccgctgcGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGccgcc                           >  2:5034111/1‑148 (MQ=11)

                                                      ctgccgctgcGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGa                           >  1:636036/1‑151 (MQ=11)

                                                       tgccgctgcGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAg                          >  2:5174599/1‑151 (MQ=11)

                                                       tgccgctgcGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAg                          <  2:826590/151‑1 (MQ=11)

                                                        gccgctgcGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAgg                         >  1:4279747/1‑151 (MQ=11)

                                                         ccgctgcGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGt                        >  1:5470981/1‑151 (MQ=11)

                                                          cgctgcGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTg                       >  2:1188581/1‑151 (MQ=11)

                                                           gctgcGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGa                      >  2:1828586/1‑151 (MQ=11)

                                                            ctgcGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAg                     >  1:4407117/1‑151 (MQ=11)

                                                            ctgcGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTCAACCACAGCATCCCTGCGCTTAAACCCCCACCACCGCCGGAggcgcg                     >  2:516149/1‑147 (MQ=11)

                                                              gcgcCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCATGCAGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGAAGGTGAGCa                   >  2:3943642/1‑151 (MQ=11)

                                                                gcCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCACTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAAc                 >  1:3993272/1‑151 (MQ=11)

                                                                 ccAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAAcc                >  2:1500033/1‑151 (MQ=11)

                                                                    aTCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAACCCaa             >  1:6122565/1‑151 (MQ=11)

                                                                      cACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAACCCAAgg           >  2:4955369/1‑151 (MQ=11)

                                                                      cACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAACCCAAgg           <  1:5405317/151‑1 (MQ=11)

                                                                       aCCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAACCCAAGGa          <  1:4932378/151‑1 (MQ=11)

                                                                        ccccGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAACCCAAGGaa         <  1:896394/151‑1 (MQ=11)

                                                                         cccGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAACCCAAGGAAg        <  2:4168596/151‑1 (MQ=11)

                                                                           cGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAACCCAAGGAAGtt      <  1:5282819/151‑1 (MQ=11)

                                                                            gAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAACCCAAGGAAGTTg     <  2:5629991/151‑1 (MQ=11)

                                                                              acacAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAACCCAAGGAAGTTggg   >  2:2953783/1‑151 (MQ=11)

                                                                              acacAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAACCCAAGGAAGTTggg   >  2:1747239/1‑151 (MQ=11)

                                                                               cacaGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAACCCAAGGAAGTTGGGt  >  1:884812/1‑151 (MQ=11)

                                                                               cacaGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAACCCAAGGAAGTTGGGt  <  1:5851121/151‑1 (MQ=1)

                                                                               cacaGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAGGCCGTGTTGAGCGATAAGATGTTGAACCACAGCATCCCTGCGTTTAAACCACCACCACCGCCGGAGGTGAGCAACCCAAGGAAGTTGGGt  <  1:1127720/151‑1 (MQ=1)

CACTTAATCTCAGCATGACGGCCTTATGCGTTGCCCGCACGCTGACCAATGTCGCTGCCGCTGCGCCAATCACCCCGAACACAGATGAAGCGAACCCCAGGGTGTATTCCGGTGCGTCGCTCTTCTGCAGGCTGTTGTAAGCCGTCTTGAGCGATAGGATGTTGAACCACAGCATCCCCGCGTTTAAACCACCACCACCGCCCGAGGTGAGCAACCCAAGGAAGTTGGGT  >  CP009974/4543631‑4543860

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`