BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	4,544,907	T→C	T72T (ACA→ACG)	RPPX_20290 ←	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	4,544,907	0	T	C	98.9%	549.0 / NA	184	T72T (ACA→ACG)	RPPX_20290	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (85/96); minor base A (0/2); total (85/99)
Fisher's exact test for biased strand distribution p-value = 5.00e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 193 total aligned reads displayed.

CCGCCGGGTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTTGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTGGCGG  >  CP009974/4544759‑4545054

ccgccgGGTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGGTTcgt                                                                                                                                                   >  1:4867013/1‑151 (MQ=17)

 cgccgGGTCCAGGCTCTCCAGCGTCTTGCTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTcgtg                                                                                                                                                  <  1:4755400/151‑1 (MQ=12)

 cgccgGGTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGGTTcgtg                                                                                                                                                  >  2:3457595/1‑151 (MQ=17)

  gccgGGTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTcgtgt                                                                                                                                                 >  1:1099485/1‑151 (MQ=17)

     gggTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTCTCGTGTGCt                                                                                                                                              >  2:2621890/1‑151 (MQ=17)

     gggTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGGTTCGTGTGCt                                                                                                                                              >  1:6031953/1‑151 (MQ=17)

       gTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTcc                                                                                                                                            <  1:4011320/151‑1 (MQ=17)

       gTACAGGCTCTCCAGCGTCTTGCTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTcc                                                                                                                                            >  2:5808228/1‑151 (MQ=17)

        tACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCa                                                                                                                                           >  2:3748461/1‑151 (MQ=17)

        tACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCa                                                                                                                                           <  2:2757483/151‑1 (MQ=17)

           aGGCGCTCCAGCGTCTTGTGCAGCAGGATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGtt                                                                                                                                        <  2:1875751/151‑1 (MQ=9)

              ctctCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCt                                                                                                                                     <  1:6218635/151‑1 (MQ=14)

              ctctCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCt                                                                                                                                     <  1:1525397/151‑1 (MQ=14)

              ctctCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTGGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCt                                                                                                                                     <  2:4265088/151‑1 (MQ=14)

                                                                                 tGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCGCAGGTCCAGGGCCAt                                                                  >  2:534379/1‑151 (MQ=11)

                                                                                     cTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCt                                                              <  1:2412642/151‑1 (MQ=14)

                                                                                     cTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCt                                                              >  2:5250412/1‑151 (MQ=14)

                                                                                      tGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCtt                                                             >  1:1740966/1‑151 (MQ=14)

                                                                                       gTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGCTGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtc                                                            >  2:6334213/1‑151 (MQ=14)

                                                                                       gTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGATCAGGTCCAGGGCCATGCCTtc                                                            <  1:6261068/151‑1 (MQ=12)

                                                                                        ttCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcg                                                           >  1:1955542/1‑151 (MQ=17)

                                                                                          cGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggc                                                         <  1:3744594/151‑1 (MQ=17)

                                                                                           ggCATCCGGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcg                                                        <  2:2849852/151‑1 (MQ=18)

                                                                                           ggCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcg                                                        <  1:4211922/151‑1 (MQ=17)

                                                                                            gCATCCAGCCGGTAGCATGCCGGCGCGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgt                                                       <  2:3295404/151‑1 (MQ=18)

                                                                                            gCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgt                                                       <  2:1176650/151‑1 (MQ=18)

                                                                                            gCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgt                                                       >  1:829324/1‑151 (MQ=18)

                                                                                             cATCTAGCCGTTAGCATGCCGGCACGCGCTCCGGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtc                                                      <  2:4521353/151‑1 (MQ=255)

                                                                                             cATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtc                                                      >  2:3618382/1‑151 (MQ=18)

                                                                                             cATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtc                                                      <  2:3899130/151‑1 (MQ=21)

                                                                                               tCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtcgg                                                    <  1:3407777/151‑1 (MQ=21)

                                                                                                ccAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtcggc                                                   <  2:1566273/151‑1 (MQ=25)

                                                                                                ccAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtcggc                                                   >  1:1385645/1‑151 (MQ=25)

                                                                                                 cAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGGTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtcggcg                                                  >  1:1124618/1‑151 (MQ=18)

                                                                                                 cAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTtcggcgtcggcg                                                  <  1:27731/151‑1 (MQ=25)

                                                                                                  aGCCGGTAGCTTGCCGGCACGCGGTCCTGCTGGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGa                                                 <  2:1018462/151‑1 (MQ=255)

                                                                                                  aGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGa                                                 <  1:2546434/151‑1 (MQ=25)

                                                                                                  aGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGa                                                 >  1:1288348/1‑151 (MQ=25)

                                                                                                  aGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGa                                                 >  1:5431542/1‑151 (MQ=25)

                                                                                                  aGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGa                                                 <  2:4164660/151‑1 (MQ=25)

                                                                                                  aGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGa                                                 <  1:4269809/151‑1 (MQ=25)

                                                                                                  aGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGa                                                 >  1:3933407/1‑151 (MQ=25)

                                                                                                    ccGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCGCGGCCGGCATCAGGTCACGCAGTTGAGGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGc                                               <  1:3797604/151‑1 (MQ=255)

                                                                                                     cGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGCGca                                              >  2:1789681/1‑151 (MQ=21)

                                                                                                       gTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcacc                                            <  1:240512/151‑1 (MQ=38)

                                                                                                         aGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccac                                          <  1:5743377/151‑1 (MQ=38)

                                                                                                          gCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccacc                                         <  2:196928/151‑1 (MQ=255)

                                                                                                          gCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccacc                                         >  2:3180849/1‑151 (MQ=37)

                                                                                                          gCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccacc                                         <  2:1754893/151‑1 (MQ=255)

                                                                                                            aTGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccaccac                                       >  1:4033893/1‑151 (MQ=38)

                                                                                                              gCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTATGCCGAGACCGACAGGCTCAGGTCCTGGTCCATGCCTTCTGCTTCGGCGTGcaccaccaccc                                     >  2:409210/1‑150 (MQ=11)

                                                                                                              gCCGGCACGCGCTACTGCTCGGACGGTTGGGGGGGTTTCGTGTGCTCCTGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcacccccacca                                     <  2:886058/151‑1 (MQ=11)

                                                                                                               ccGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccaccaccac                                    <  2:111911/151‑1 (MQ=255)

                                                                                                               ccGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccaccaccac                                    <  1:5281569/151‑1 (MQ=255)

                                                                                                               ccGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGcaccaccaccac                                    <  1:1188757/151‑1 (MQ=255)

                                                                                                                cGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCATGGCCATGCCTTCGGCGTCGGCGAGCaccaccaccacc                                   >  1:1145127/1‑151 (MQ=255)

                                                                                                                cGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCaccaccaccacc                                   >  2:2421512/1‑151 (MQ=38)

                                                                                                                cGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCaccaccaccacc                                   >  2:3378133/1‑151 (MQ=37)

                                                                                                                   cACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGc                                <  1:3508572/151‑1 (MQ=255)

                                                                                                                   cACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGc                                >  1:495364/1‑151 (MQ=37)

                                                                                                                    aCGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCa                               >  2:6375806/1‑151 (MQ=255)

                                                                                                                    aCGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCa                               <  2:3890078/151‑1 (MQ=38)

                                                                                                                     cgcgCTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCAc                              >  1:2214976/1‑151 (MQ=255)

                                                                                                                      gcgcTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACt                             >  1:2368881/1‑151 (MQ=255)

                                                                                                                      gcgcTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACt                             <  1:5058013/151‑1 (MQ=255)

                                                                                                                       cgcTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGcccct                            >  2:5053903/1‑147 (MQ=255)

                                                                                                                       cgcTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACtt                            >  1:2754542/1‑151 (MQ=38)

                                                                                                                       cgcTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACtt                            >  2:5623838/1‑151 (MQ=38)

                                                                                                                        gcTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACttt                           >  2:2893951/1‑151 (MQ=38)

                                                                                                                        gcTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACttt                           <  1:5912237/151‑1 (MQ=255)

                                                                                                                         cTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTc                          >  1:4195465/1‑151 (MQ=255)

                                                                                                                         cTCCTGCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTc                          <  1:4161780/151‑1 (MQ=25)

                                                                                                                              gCTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTg                     <  1:4423696/151‑1 (MQ=255)

                                                                                                                               cTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTgg                    >  1:1825288/1‑151 (MQ=255)

                                                                                                                               cTCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTgg                    <  1:3632432/151‑1 (MQ=255)

                                                                                                                                tCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTggg                   >  2:50642/1‑151 (MQ=255)

                                                                                                                                tCGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTggg                   >  2:841137/1‑151 (MQ=255)

                                                                                                                                 cGGGAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCGCAGCTCCCGGGCCATGCCTTCGGCGTCGGCGCGCACCACTACCCCCGGCCCTTTACGCTGGGt                  >  2:6215464/1‑151 (MQ=14)

                                                                                                                                   ggAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCCCCACCGGCACTTTCGGCTGGGTcc                >  2:4769214/1‑151 (MQ=255)

                                                                                                                                    gAGGTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCa               >  2:3386483/1‑151 (MQ=255)

                                                                                                                                      ggTTGGGCGGGTTTCGTGTGCTCCAGTTGTTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTACAgg             >  1:100220/1‑151 (MQ=255)

                                                                                                                                      ggTTGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAgg             >  1:4066755/1‑151 (MQ=255)

                                                                                                                                        ttGGGCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCCGGGCCCAgggg           >  2:381126/1‑151 (MQ=255)

                                                                                                                                          gggCGGGTTTCGTGTGCTCCAGTTGCTCGGGCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCCCCGGCACTTTCGGCTGGGTCCAGGGGTa         <  2:27919/151‑1 (MQ=255)

                                                                                                                                          gggCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTa         >  1:3156050/1‑151 (MQ=255)

                                                                                                                                          gggCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTa         <  1:968392/151‑1 (MQ=255)

                                                                                                                                          gggCGGGTGTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTa         <  2:4197760/151‑1 (MQ=255)

                                                                                                                                           ggCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAg        <  1:6524036/151‑1 (MQ=255)

                                                                                                                                            gCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGt       <  2:2323797/151‑1 (MQ=255)

                                                                                                                                            gCGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGt       <  1:6375806/151‑1 (MQ=255)

                                                                                                                                             ggggTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTg      <  2:710688/150‑1 (MQ=255)

                                                                                                                                             cGGGTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGCCCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCCGGGGTAGTg      >  2:264900/1‑151 (MQ=255)

                                                                                                                                              gggTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTgg     >  2:2038297/1‑151 (MQ=255)

                                                                                                                                              gggTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTgg     <  2:803543/151‑1 (MQ=255)

                                                                                                                                              gggTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTgg     <  2:803592/151‑1 (MQ=255)

                                                                                                                                               ggTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTggc    <  1:3881884/151‑1 (MQ=255)

                                                                                                                                                gTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTggcg   <  2:531831/151‑1 (MQ=255)

                                                                                                                                                gTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTggcg   >  1:1031395/1‑151 (MQ=255)

                                                                                                                                                gTTTCGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTggcg   <  2:2827190/151‑1 (MQ=255)

                                                                                                                                                 tttcGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTggcgg  <  2:1163642/151‑1 (MQ=255)

CCGCCGGGTACAGGCTCTCCAGCGTCTTGTTCAGCAGCATGGCGACCAGGTTGCGATGGTGAAAGTCGCGGCTCTGCGGGCTGAGCTGTTCGGCATCCAGCCGGTAGCATGCCGGCACGCGCTCCTGCTCGGGAGGTTGGGCGGGTTTTGTGTGCTCCAGTTGCTCGGCCGGCATCAGGTCACGCAGTTGATGCTGGTAGGCCGAGACCGACAGGCTCAGGTCCAGGGCCATGCCTTCGGCGTCGGCGAGCACCACCACCACCGGCACTTTCGGCTGGGTCCAGGGGTAGTGGCGG  >  CP009974/4544759‑4545054

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`