Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 4,759,297 T→C A167A (GCA→GCG)  RPPX_21175 ← diguanylate phosphodiesterase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099744,759,2970TC99.5% 1340.0 / ‑3.4 374A167A (GCA→GCG) RPPX_21175diguanylate phosphodiesterase
Reads supporting (aligned to +/- strand):  ref base T (0/2);  new base C (191/181);  total (191/183)
Fisher's exact test for biased strand distribution p-value = 2.39e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.63e-01

Only 100 of 374 total aligned reads displayed.

CACGCTGAAAGGGTAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGTGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGACGTAATCGCCAGGATTGACC  >  CP009974/4759150‑4759444
                                                                                                                                                   |                                                                                                                                                   
  cGCTGAAAGGGTAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGt                                                                                                                                                <  1:3322448/151‑1 (MQ=255)
   gCTGAAAGGGTAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTc                                                                                                                                               >  1:1521444/1‑151 (MQ=255)
   gCTGAAAGGGTAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTc                                                                                                                                               >  1:2643901/1‑151 (MQ=255)
    cTGAAAGGGTAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGGCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTca                                                                                                                                              <  1:1182896/151‑1 (MQ=255)
     tGAAAGGGTAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCCGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTcag                                                                                                                                             >  1:3188902/1‑151 (MQ=255)
     tGAAAGGGTAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTcag                                                                                                                                             <  2:3805056/151‑1 (MQ=255)
     gggaaGGGTAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCAGCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTcag                                                                                                                                             <  2:5753651/148‑1 (MQ=255)
      gAAAGGGTAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTcagc                                                                                                                                            >  1:3566889/1‑151 (MQ=255)
       aaaGGGTAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTcagcc                                                                                                                                           >  1:3985313/1‑150 (MQ=255)
            gTAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAggtgg                                                                                                                                      >  1:2408641/1‑151 (MQ=255)
            gTAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCCTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCCGCGCTGTCAGCAggcgg                                                                                                                                      >  1:4781481/1‑151 (MQ=255)
             tAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAggtggt                                                                                                                                     >  2:407696/1‑151 (MQ=255)
                cgcgTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGc                                                                                                                                  >  2:5079327/1‑151 (MQ=255)
                 gcgTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGcc                                                                                                                                 >  1:6186373/1‑151 (MQ=255)
                  cgTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCa                                                                                                                                <  1:5642708/151‑1 (MQ=255)
                   gTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGTGCTGTCAGCAGGTGGTCGCCAt                                                                                                                               <  2:4550240/151‑1 (MQ=255)
                    tCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATc                                                                                                                              >  2:5152855/1‑151 (MQ=255)
                    tCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCGGTCAGCAGGGGGTCGCCATc                                                                                                                              >  2:5887185/1‑151 (MQ=255)
                     cGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATcc                                                                                                                             >  1:3392342/1‑151 (MQ=255)
                       aGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTACCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCAc                                                                                                                           <  1:2181220/151‑1 (MQ=255)
                        gCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCAcc                                                                                                                          >  2:1996137/1‑151 (MQ=255)
                         ccTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCg                                                                                                                         <  2:1939253/151‑1 (MQ=255)
                         ccTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCg                                                                                                                         >  2:3912256/1‑151 (MQ=255)
                            aaCAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCgtgg                                                                                                                      <  2:6233754/151‑1 (MQ=255)
                                gCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGAt                                                                                                                  >  1:3502760/1‑151 (MQ=255)
                                 cACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGAtt                                                                                                                 <  2:3672919/151‑1 (MQ=255)
                                  aCGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTg                                                                                                                >  2:5775287/1‑151 (MQ=255)
                                    gTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCa                                                                                                              <  1:557243/151‑1 (MQ=255)
                                       ggCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCg                                                                                                           >  1:4627842/1‑151 (MQ=255)
                                       ggCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCg                                                                                                           >  2:2200283/1‑151 (MQ=255)
                                       ggCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCg                                                                                                           <  1:1061268/151‑1 (MQ=255)
                                          aCTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTgg                                                                                                        >  2:3355355/1‑151 (MQ=255)
                                           cTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGt                                                                                                       <  2:1667713/151‑1 (MQ=255)
                                             ggcggcAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCg                                                                                                     <  2:1120745/151‑1 (MQ=255)
                                               cggcAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGcc                                                                                                   <  2:3700646/151‑1 (MQ=255)
                                                ggcAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCg                                                                                                  <  1:1635309/151‑1 (MQ=255)
                                                ggcAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCg                                                                                                  <  1:5394616/151‑1 (MQ=255)
                                                 gcagcaGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGt                                                                                                 <  2:1250448/151‑1 (MQ=255)
                                                    gcagGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGc                                                                                              <  2:1559448/151‑1 (MQ=255)
                                                      agGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTg                                                                                            <  1:6318537/151‑1 (MQ=255)
                                                           agaCGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACg                                                                                       >  2:4629872/1‑151 (MQ=255)
                                                           agaCGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACg                                                                                       >  1:2977185/1‑151 (MQ=255)
                                                           agaCGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACg                                                                                       >  2:2293672/1‑151 (MQ=255)
                                                           agaCGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACg                                                                                       >  1:489214/1‑151 (MQ=255)
                                                            gaCGCCTTTGTGGACCACGCCGTCCTGGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTGCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACgg                                                                                      <  1:3766889/151‑1 (MQ=255)
                                                               gCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAg                                                                                   <  1:5776996/151‑1 (MQ=255)
                                                               gCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAg                                                                                   <  2:891864/151‑1 (MQ=255)
                                                                ccTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGa                                                                                  <  1:1464462/151‑1 (MQ=255)
                                                                 cTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGAc                                                                                 >  1:6263821/1‑151 (MQ=255)
                                                                 cTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGAc                                                                                 >  1:2246454/1‑151 (MQ=255)
                                                                  tttGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGAcc                                                                                <  1:1118983/151‑1 (MQ=255)
                                                                  tttGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGAcc                                                                                <  1:4971790/151‑1 (MQ=255)
                                                                  tttGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGAcc                                                                                >  1:1009088/1‑151 (MQ=255)
                                                                   ttGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACca                                                                               >  1:3106222/1‑151 (MQ=255)
                                                                     gtgGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACcagc                                                                             >  1:5229983/1‑151 (MQ=255)
                                                                          ccACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCgg                                                                        <  2:1933329/151‑1 (MQ=255)
                                                                              gCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTgg                                                                    >  1:4259709/1‑151 (MQ=255)
                                                                               ccGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGc                                                                   <  1:2037318/151‑1 (MQ=255)
                                                                                   ccTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCgg                                                               >  2:2747368/1‑151 (MQ=255)
                                                                                    cTTGCCCATCCAGGCGTTGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGGTCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGCGGCCGCCGTCGCTGGCCCGGTAGACCAGCAGCGGGCGGCCCGGc                                                              >  2:2550629/1‑151 (MQ=255)
                                                                                    cTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGc                                                              <  2:348901/151‑1 (MQ=255)
                                                                                     ttGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCg                                                             >  2:3265807/1‑151 (MQ=255)
                                                                                            tCCAGGCGTCGCCCACGCGTATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGAGGTGATTGCTCCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGa                                                      <  2:2836451/151‑1 (MQ=255)
                                                                                            tCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGa                                                      <  2:6501847/151‑1 (MQ=255)
                                                                                             ccAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAg                                                     >  1:5010708/1‑151 (MQ=255)
                                                                                             ccAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAg                                                     >  1:4069722/1‑151 (MQ=255)
                                                                                                ggCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTg                                                  >  1:751490/1‑151 (MQ=255)
                                                                                                 gCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGc                                                 >  1:4472945/1‑151 (MQ=255)
                                                                                                  cGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGcc                                                >  1:368332/1‑151 (MQ=255)
                                                                                                   gTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCg                                               <  1:1025310/151‑1 (MQ=255)
                                                                                                    tCGCCCACGCGGATCTGCAGTTCTTCATCGGGGCCGAGCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGt                                              <  2:384816/151‑1 (MQ=255)
                                                                                                      gCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTcc                                            >  2:3322343/1‑151 (MQ=255)
                                                                                                      gCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTcc                                            >  1:6481614/1‑151 (MQ=255)
                                                                                                        ccACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCAt                                          <  2:30538/151‑1 (MQ=255)
                                                                                                         cACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATc                                         <  2:5236796/151‑1 (MQ=255)
                                                                                                          aCGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATcc                                        >  2:1212707/1‑150 (MQ=255)
                                                                                                          aCGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCa                                        >  1:2118396/1‑151 (MQ=255)
                                                                                                           cgcgGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAg                                       >  2:6347449/1‑151 (MQ=255)
                                                                                                             cgGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGcc                                     >  1:1703309/1‑151 (MQ=255)
                                                                                                              ggATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCa                                    >  1:5806513/1‑151 (MQ=255)
                                                                                                               gATTTGCGGTTCTGCAGCGGGGCCGATCGGGCGCAGCGCTGTCAGCAGGGGGTCGCCATCCGCCGTGGGGAGTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCAt                                   <  2:4744380/151‑1 (MQ=255)
                                                                                                                     cAGTTCTTCATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTg                             >  2:1744615/1‑151 (MQ=255)
                                                                                                                      aGTTCTTCAGCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGc                            <  2:418230/151‑1 (MQ=255)
                                                                                                                         tcttcATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGt                         <  1:681780/151‑1 (MQ=255)
                                                                                                                          cttcATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTc                        <  1:4348935/151‑1 (MQ=255)
                                                                                                                            tcATCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGa                      <  1:2666003/151‑1 (MQ=255)
                                                                                                                              aTCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGACg                    <  1:5495879/151‑1 (MQ=255)
                                                                                                                              aTCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGACg                    >  2:1617863/1‑151 (MQ=255)
                                                                                                                               tCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCg                          <  2:1067303/144‑1 (MQ=255)
                                                                                                                               tCGGGGCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGACGt                   <  2:2104529/151‑1 (MQ=255)
                                                                                                                                cGGGCCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATCACTTGCCGTCGACGTa                  >  2:5376375/1‑151 (MQ=255)
                                                                                                                                 ggggCCGATCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGACGTaa                 <  1:5114494/151‑1 (MQ=255)
                                                                                                                                        aTCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGACGTAATCGCCAg          <  1:847572/151‑1 (MQ=255)
                                                                                                                                         tCAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGACGTAATCGCCAgg         <  2:3152373/151‑1 (MQ=255)
                                                                                                                                          cAGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGCCGTAATCGCCAGGa        >  2:6057586/1‑151 (MQ=255)
                                                                                                                                           aGGCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGACGTAATCGCCAGGAt       <  1:5904166/151‑1 (MQ=255)
                                                                                                                                            ggCGCAGCGCTGTCAGCAGGTGGTCGCCATCCCCCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGACGTAATCGCCAGGAtt      <  2:5553688/151‑1 (MQ=255)
                                                                                                                                            ggCGCAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGACGTAATCGCCAGGAtt      >  1:6093798/1‑151 (MQ=255)
                                                                                                                                               gcAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGACGTAATCGCCAGGATTGAc   >  1:2615727/1‑151 (MQ=255)
                                                                                                                                                cAGCGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGACGTAATCGCCAGGATTGAcc  <  2:842636/151‑1 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
CACGCTGAAAGGGTAACGCGTCGAGCCTAACAGCACGTTGGCACTGGCGGCAGCAGGGGAGACGCCTTTGTGGACCACGCCGTCCTTGCCCATCCAGGCGTCGCCCACGCGGATTTGCAGTTCTTCATCGGGGCCGATCAGGCGCAGTGCTGTCAGCAGGTGGTCGCCATCCACCGTGGTGATTGCACCGTGGTCGCCGTCGCTGGCACGGTAGACCAGCAGCGGGTGGCCCGGCGTAACCGAGTTGCCGTCCATCAGCCATAACTTGCCGTCGACGTAATCGCCAGGATTGACC  >  CP009974/4759150‑4759444

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑