| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 5,081,736 | T→C | D46G (GAC→GGC) | RPPX_22555 ← | TenA family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 5,081,736 | 0 | T | C | 99.7% | 1116.7 / NA | 316 | D46G (GAC→GGC) | RPPX_22555 | TenA family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (149/166); minor base A (1/0); total (150/166) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.75e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 319 total aligned reads displayed.
AAGGCCTCGAAGGCACGCAGGAAGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGTCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCTGTCCT > CP009974/5081589‑5081883 | aaGGCCTCGAAGGCACGCAGGAAGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCt > 1:5192457/1‑151 (MQ=255) aGGCCTCGAAGGCACGCAGGAAGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTg > 1:883488/1‑151 (MQ=255) gCCTCGAAGGCACGCAGGAAGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGaa > 2:1378135/1‑151 (MQ=255) ccTCGAAGGCACGCAGGAAGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAAc < 2:4321752/151‑1 (MQ=255) gAAGGCACGCAGGAAGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAgg > 2:288373/1‑151 (MQ=255) aaGGCACGCAGGAAGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGt < 1:540749/151‑1 (MQ=255) aaGGCACGCAGGAAGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGt < 1:3645669/151‑1 (MQ=255) aCGCAGGAAGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCg < 1:1903939/151‑1 (MQ=255) cGCAGGAAGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGa < 1:6413893/151‑1 (MQ=255) aGGAAGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCa > 2:1984752/1‑151 (MQ=255) gAAGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCAGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGCTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGCTAGTCGACCATg > 2:360425/1‑151 (MQ=255) aGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGAt > 1:21565/1‑151 (MQ=255) aGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCgg > 2:5639874/1‑151 (MQ=255) gtgtTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGt > 1:1234220/1‑151 (MQ=255) gtTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTca > 2:1625398/1‑151 (MQ=255) gtTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTca < 2:3222648/151‑1 (MQ=255) tctcGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTcagg > 1:2298655/1‑151 (MQ=255) ctcGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTcaggc > 1:4805628/1‑151 (MQ=255) tcGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTcaggca < 2:5260051/151‑1 (MQ=255) tcGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTcaggca < 1:1620311/151‑1 (MQ=255) cGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTcaggcag > 1:110570/1‑151 (MQ=255) gTCACTGCAGATCAGCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTcaggcagg < 2:3502254/151‑1 (MQ=255) tCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCaggcaggc > 1:1508815/1‑151 (MQ=255) tCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCaggcaggc > 2:2991594/1‑151 (MQ=255) cACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTcaggcaggtt < 2:1927263/151‑3 (MQ=255) tGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGcc > 2:1459699/1‑151 (MQ=255) gCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCg > 2:5009210/1‑151 (MQ=255) cAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGt > 1:1293054/1‑151 (MQ=255) aGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTc < 1:1765735/151‑1 (MQ=255) gATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCg < 2:1863743/151‑1 (MQ=255) gtcatcCCGGCAAAGCGGCCCGAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGc < 2:6153558/150‑1 (MQ=255) atcatcCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGc > 2:4483473/1‑151 (MQ=255) catcCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGcac > 1:6480749/1‑151 (MQ=255) cccGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAAt > 2:1231014/1‑151 (MQ=255) cccGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAAt < 2:5836007/151‑1 (MQ=255) ggCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCgg > 2:6005689/1‑151 (MQ=255) gCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCggg < 1:3450772/151‑1 (MQ=255) gCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCggg > 2:3001303/1‑151 (MQ=255) aaGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCa > 1:5514171/1‑151 (MQ=255) gAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACgg > 1:5738002/1‑151 (MQ=255) cAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCa < 2:4229132/151‑1 (MQ=255) ggCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAAc < 1:226213/151‑1 (MQ=255) cGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACgg > 2:580129/1‑151 (MQ=255) cGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACgg < 1:3284250/151‑1 (MQ=255) cGGGCTTCAAACGTGGCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACgg < 2:4955921/151‑1 (MQ=255) gCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGgccg < 2:21565/151‑1 (MQ=255) tCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGccgccg < 1:2770857/151‑1 (MQ=255) tgtCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGt < 1:5366780/151‑1 (MQ=255) ggtCAGCGGTGGCGAGGGCCGCGCCTAGCAGGGTCACGAAGCTGCCGAGGAAGCGGGGGCCCTGGACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGt < 2:3833877/150‑1 (MQ=255) gtCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTc < 2:3555121/151‑1 (MQ=255) cAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCgg < 1:5616250/151‑1 (MQ=255) cAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCgg > 2:5969516/1‑151 (MQ=255) cAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCgg < 1:4111153/151‑1 (MQ=255) aGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGc > 2:6127075/1‑151 (MQ=255) aGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGc > 1:702829/1‑151 (MQ=255) gCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCt > 1:3309275/1‑151 (MQ=255) gCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCt < 1:511334/151‑1 (MQ=255) gCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCt > 2:2302236/1‑151 (MQ=255) ggTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCg > 2:1753998/1‑151 (MQ=255) ggTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCg > 2:2426015/1‑151 (MQ=255) ggTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCg < 1:3137733/151‑1 (MQ=255) tGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGtt > 2:4906552/1‑151 (MQ=255) gATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTGTgg > 2:4043001/1‑151 (MQ=255) aTGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTggc < 1:2556404/151‑1 (MQ=255) tGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTggcg > 1:377719/1‑151 (MQ=255) ggCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGcc > 2:5473153/1‑117 (MQ=255) gCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTggcggc < 1:6231250/151‑1 (MQ=255) ccGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGgcggcg < 2:5431701/151‑1 (MQ=255) ccGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGgcggcg > 2:234852/1‑151 (MQ=255) ccGCACATAGCAGGGTCACAAAGCTGACGAGGAAACGGTGGCCCTGAACAAGGTAGTCGACCAAGATCGGGTCAGGCAGGCTGCCGACGAAAAATCGGGTCACGAAACGGTGGCCAACAGCCGCCGACCAGGTCGGCTCGTTCTGgcggcg < 2:853233/151‑1 (MQ=255) cgcgCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGgcgc < 2:3696384/151‑1 (MQ=255) cgcgCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGgcgc > 1:6281090/1‑151 (MQ=255) gcgcCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGATAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGCCGgcgcc > 2:5951962/1‑150 (MQ=255) cgcCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAg < 1:4824839/151‑1 (MQ=255) tAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGAc > 2:6108666/1‑151 (MQ=255) gCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTg < 1:1374876/151‑1 (MQ=255) gCAGGGTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTg < 1:2435354/151‑1 (MQ=255) gggTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCt < 2:2280661/151‑1 (MQ=255) gggTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCt < 1:308397/151‑1 (MQ=255) gggTCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCt > 2:1043894/1‑151 (MQ=255) tCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGaa < 2:760518/151‑1 (MQ=255) tCACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGaa < 1:6117480/151‑1 (MQ=255) cACGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGAACGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGaaa < 2:6291344/151‑1 (MQ=255) aCGAGGCTGTGGGGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCGGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAAc < 1:4211036/151‑1 (MQ=255) aCGAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAAc < 2:883488/151‑1 (MQ=255) gAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGt > 2:1114727/1‑151 (MQ=255) gAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGt > 1:594903/1‑151 (MQ=255) gAAGCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCGGAAACgg > 2:652375/1‑150 (MQ=255) gCTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGTTCg < 1:4496231/151‑1 (MQ=255) cTGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGTTCgg < 1:4719248/151‑1 (MQ=255) tGTCGAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGt > 1:4003781/1‑151 (MQ=255) gAGGAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATg > 1:2016563/1‑151 (MQ=255) ggAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGtt > 2:4099909/1‑151 (MQ=255) ggAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGtt > 1:4935393/1‑151 (MQ=255) ggAAACGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGtt > 1:3871468/1‑151 (MQ=255) ggAAACGACGGCCCTGAACCAGGTAGTGGACAATGAACAGGTCAGGCAGGCGGCGAACGAAGAAACGGGTCACGAAACGGTGGAGAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGTGCAGGGACTGGCTGAAACGTACggagaagtt < 2:2576225/151‑8 (MQ=255) aaCGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCt > 2:5084534/1‑151 (MQ=255) aCGGTGGCCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGGGACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTGCTGGCGGCGCAGGGACTGGCTGAGACGTTCGGTCATGTTGCTg > 2:311481/1‑151 (MQ=255) cGGTGGCCCTGAACCAGGTAGTAGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGCCCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCTGt < 1:3009886/151‑1 (MQ=255) gtggcCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCTGTcc < 2:1300543/151‑1 (MQ=255) | AAGGCCTCGAAGGCACGCAGGAAGTAGGTGTTCTCGTCACTGCAGATCATCCCGGCAAAGCGGCCGAAGCGCAGGCGGGCTTCAAACGTGTCAGCGGTGGCGATGGCCGCGCCTAGCAGGGTCACGAAGCTGTCGAGGAAACGGTGGTCCTGAACCAGGTAGTCGACCATGATCGGGTCAGGCAGGCTGCCGTCGCACAATCGGGTCACGAAACGGTGGCCAACGGCCGCCGACCAGGTCGGCTCGTTCTGGCGGCGCAGGGACTGGCTGAAACGTTCGGTCATGTTGCTGTCCT > CP009974/5081589‑5081883 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |