Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 5,157,352 C→T intergenic (+178/+65) RPPX_22875 → / ← dnaE2 integrase/DNA polymerase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099745,157,3520CT100.0% 1083.6 / NA 290intergenic (+178/+65)RPPX_22875/dnaE2integrase/DNA polymerase
Reads supporting (aligned to +/- strand):  ref base C (0/0);  new base T (156/134);  total (156/134)

Only 100 of 294 total aligned reads displayed.

GGGGGGCTCAGGCCTAGTGGCAAACGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAACGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACCGCCGCGCAATCAGGTGCCGCA  >  CP009974/5157204‑5157499
                                                                                                                                                    |                                                                                                                                                   
 gggggCTCAGGCCTAGTGGCAAACGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAAtgcg                                                                                                                                                  <  2:1364144/151‑1 (MQ=255)
    ggCTCAGGGCTAGTGGCAAACGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTg                                                                                                                                               <  2:6438428/151‑1 (MQ=255)
     gCTCAGGCCTAGTGGCAAACGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTgg                                                                                                                                              >  1:5745279/1‑151 (MQ=255)
       tCAGGCCTAGTGGCAAACGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGgct                                                                                                                                            <  1:4984842/151‑1 (MQ=255)
         aGGCCTAGTGGCAAACGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGGGgctgc                                                                                                                                          >  1:6032224/1‑151 (MQ=255)
           gCCTAGTGGCAAACGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCtt                                                                                                                                        >  2:3358349/1‑151 (MQ=255)
            ccTAGTGGCAAACGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTc                                                                                                                                       >  1:1435353/1‑151 (MQ=255)
             cTAGTGGCAAACGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTcg                                                                                                                                      >  2:3017543/1‑151 (MQ=255)
                 tGGCAAACGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCggg                                                                                                                                  >  2:5323892/1‑151 (MQ=255)
                    cAAACGTGGCTGTCGACCAAGGTATAACGCACGGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGAATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGATGGCTGCTTCGCGGGCTc                                                                                                                               <  2:1870942/151‑1 (MQ=255)
                     aaaCGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCg                                                                                                                              >  2:6467565/1‑151 (MQ=255)
                      aaCGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGc                                                                                                                             <  2:5960060/151‑1 (MQ=255)
                      aaCGGGGCTATGGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGc                                                                                                                             <  2:5136807/151‑1 (MQ=255)
                       aCGTGGCTGTAGAACAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTACAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGcc                                                                                                                            <  2:6254615/151‑1 (MQ=255)
                        cGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGccc                                                                                                                           <  1:751774/151‑1 (MQ=255)
                          tGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGc                                                                                                                         >  2:67399/1‑151 (MQ=255)
                           ggCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGcc                                                                                                                        >  2:782775/1‑150 (MQ=255)
                             cTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTcc                                                                                                                      >  2:3218459/1‑151 (MQ=255)
                                 cGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCcaca                                                                                                                  <  1:987811/151‑1 (MQ=255)
                                 cGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCcaca                                                                                                                  >  2:4015126/1‑151 (MQ=255)
                                  gACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAg                                                                                                                 >  1:1073122/1‑151 (MQ=255)
                                   aCCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAgg                                                                                                                >  1:4068606/1‑151 (MQ=255)
                                    ccAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAggg                                                                                                               <  1:4406829/151‑1 (MQ=255)
                                     cAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGa                                                                                                              >  1:3023267/1‑151 (MQ=255)
                                     cAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCCCGGGCCCGCCCGCcccccccgcgc                                                                                                              >  1:1225134/1‑144 (MQ=25)
                                      aaGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGaa                                                                                                             >  1:2076265/1‑151 (MQ=255)
                                      aaGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCCCGCCCGCTCCCACAGGGaa                                                                                                             >  1:4199301/1‑151 (MQ=255)
                                        ggTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAAcc                                                                                                           <  1:5321507/151‑1 (MQ=255)
                                          tataACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACcgc                                                                                                         <  2:2478066/151‑1 (MQ=255)
                                           ataACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACCGGGGACcgcg                                                                                                        >  2:3608486/1‑151 (MQ=255)
                                           ataACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACcgcg                                                                                                        <  1:2928558/151‑1 (MQ=255)
                                             aaCGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCa                                                                                                      <  2:5779798/151‑1 (MQ=255)
                                                   ccGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTcc                                                                                                <  1:2344776/151‑1 (MQ=255)
                                                    cGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCACTGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGCAACCGCGCACGTTCCg                                                                                               >  1:1975067/1‑151 (MQ=255)
                                                     gTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGa                                                                                              <  1:5617185/151‑1 (MQ=255)
                                                     gTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGa                                                                                              >  2:4325436/1‑151 (MQ=255)
                                                        gCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCg                                                                                           >  1:6499345/1‑151 (MQ=255)
                                                                   gTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGt                                                                                <  2:3384066/151‑1 (MQ=255)
                                                                      ggggCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGa                                                                             <  2:409654/151‑1 (MQ=255)
                                                                      ggggCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGa                                                                             <  1:3642566/151‑1 (MQ=255)
                                                                       gggCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGaa                                                                            <  1:2823845/151‑1 (MQ=255)
                                                                          cAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATc                                                                         >  1:5723874/1‑151 (MQ=255)
                                                                           aGGCGCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATcc                                                                        <  2:739840/151‑1 (MQ=255)
                                                                              cgcAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCgg                                                                     <  2:1289733/149‑1 (MQ=255)
                                                                               tCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGc                                                                    >  1:3383881/1‑151 (MQ=255)
                                                                               tCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGc                                                                    <  1:4783847/151‑1 (MQ=255)
                                                                                cAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCt                                                                   <  1:4471866/151‑1 (MQ=255)
                                                                                 aaGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTg                                                                  <  1:2571999/151‑1 (MQ=255)
                                                                                    tcTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGt                                                               >  1:5790541/2‑151 (MQ=255)
                                                                                      ggCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTAc                                                             <  2:4439405/150‑1 (MQ=255)
                                                                                        cAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACAt                                                           >  2:269581/1‑151 (MQ=255)
                                                                                         aGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATc                                                          >  2:5681275/1‑151 (MQ=255)
                                                                                          ggCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATcc                                                         >  1:1802328/1‑151 (MQ=255)
                                                                                            cGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGCAATCCCGGCTGCGTACATCCAg                                                       >  2:4512534/1‑151 (MQ=255)
                                                                                             ggTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGCACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAACCCCGGCTGCGTACATCCAGc                                                      >  2:385944/1‑151 (MQ=255)
                                                                                             ggTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGc                                                      >  1:460338/1‑151 (MQ=255)
                                                                                             ggTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGc                                                      <  2:1481694/151‑1 (MQ=255)
                                                                                               tCAGTGTGGGAGCGGGCATGCCCGCGAACAGCGGCAAGGCCGGTGCCCTGCAGTGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGccc                                                    <  2:1693370/151‑1 (MQ=255)
                                                                                                  aTGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGAGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCCTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTg                                                 <  1:652517/151‑1 (MQ=255)
                                                                                                   ggtgGGGGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCGCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTgc                                                <  2:2233447/150‑1 (MQ=255)
                                                                                                    gtgGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTgca                                               <  1:2151015/151‑1 (MQ=255)
                                                                                                     tgGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGCTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTgccg                                              >  2:4770985/1‑149 (MQ=255)
                                                                                                      gggAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTgcagc                                             <  1:2197957/151‑1 (MQ=255)
                                                                                                       ggAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTgcagca                                            <  2:2028526/151‑1 (MQ=255)
                                                                                                       ggAGCGGGCAGGCCCGCGAACAGCGGCAAGGCCGGTGCCGTGCAGTGGGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTgcagca                                            <  2:4381874/151‑1 (MQ=25)
                                                                                                          gCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTTGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCg                                         >  2:2129791/1‑151 (MQ=255)
                                                                                                           cGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCCGCgg                                        >  2:4881855/1‑151 (MQ=255)
                                                                                                           cGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAATGGAAATCCCGGCTGCGTACATCCAGCCCTTGCACCAGCgg                                        >  1:1665275/1‑151 (MQ=255)
                                                                                                            gggCTTGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACCGGGAACCGCGCAAGGTCCGCGCGTTGGGGACAGTGGAAAGCCCGGCCGCGTGCATCCAGCCCGTGCAGCAGCGGa                                       >  2:5380334/1‑151 (MQ=21)
                                                                                                               cATGCCCGCGAACACCGGGAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGGCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTc                                    <  2:3732028/151‑1 (MQ=255)
                                                                                                                    ccGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTTAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACAtc                               >  1:856484/1‑151 (MQ=255)
                                                                                                                    ccGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACAtc                               <  1:3978048/151‑1 (MQ=255)
                                                                                                                    ccGCGAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACAtc                               >  1:828972/1‑151 (MQ=255)
                                                                                                                       cgAGCACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACAtcctc                            <  2:1456922/151‑1 (MQ=255)
                                                                                                                       cgAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACAtcctc                            <  1:342477/151‑1 (MQ=255)
                                                                                                                       cgAACACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCCGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACAtcctc                            >  2:5095866/1‑151 (MQ=255)
                                                                                                                        gAACACCGGCAAGGCCGGTGCGCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACAtcctcc                           <  2:4126948/151‑1 (MQ=255)
                                                                                                                         gacacCGGCAAGGGCGGTGCCCTGCAATGCGGTGGCGGCTTCGCGGCCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCa                          <  2:5714903/150‑1 (MQ=255)
                                                                                                                         aaCACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCa                          <  2:280340/151‑1 (MQ=255)
                                                                                                                         aaCACCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCa                          <  1:3380828/151‑1 (MQ=255)
                                                                                                                          acacCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCaa                         <  2:2994192/151‑1 (MQ=255)
                                                                                                                           cacCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGCACCGCGCAAGTTCCGAGCGTTGGGGGCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCCGCGGACTCACCTGCTCCCAc                        >  2:4268367/1‑151 (MQ=25)
                                                                                                                           cacCGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCaa                         <  1:6178988/150‑1 (MQ=255)
                                                                                                                              cGGCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAAccgc                     >  2:5640898/1‑151 (MQ=255)
                                                                                                                               ggCAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGATCCGAGCGTAGGGGTCAGGGGAAATTCCGGCTGCGAACATCCAGCCCTTGCAGCAGCGGACTCACACCCTCCAAccgcc                    >  2:5545852/1‑151 (MQ=37)
                                                                                                                                 cAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACcgccgc                  <  2:4623769/151‑1 (MQ=255)
                                                                                                                                 cAAGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACcgccgc                  >  1:1000337/1‑151 (MQ=255)
                                                                                                                                  aaGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACCGCcgcg                 >  2:1624013/1‑151 (MQ=255)
                                                                                                                                   aGGCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACCGCCgcgc                <  1:5952951/151‑1 (MQ=255)
                                                                                                                                   aGGCCGGTGACCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCGCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACCGCCgcgc                <  2:607947/151‑1 (MQ=255)
                                                                                                                                    ggCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCATCGGACTCACATCCTCCAACCGCCGCGCa               >  1:5496802/1‑151 (MQ=255)
                                                                                                                                    ggCCGGTGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACCTCCTCCCACCGCCGCGCa               >  1:3142141/1‑151 (MQ=255)
                                                                                                                                          tGCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACCGCCGCGCAAt             <  1:6336820/147‑1 (MQ=255)
                                                                                                                                           ggccTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACCGCCGCGCAATCAGGt        <  2:981173/149‑1 (MQ=255)
                                                                                                                                           gCCCTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACCGCCGCGCAATCAGGt        <  1:5652662/151‑1 (MQ=255)
                                                                                                                                            cccTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACCGCCGCGCAATCAGGTg       <  1:5151793/151‑1 (MQ=255)
                                                                                                                                              cTGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACCGCCGCGCAATCAGGTGcc     <  2:6166489/151‑1 (MQ=255)
                                                                                                                                               tGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACCGCCGCGCAATCAGGTGccc    >  2:3874715/1‑150 (MQ=255)
                                                                                                                                               tGCAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACCGCCGCGCAATCAGGTGCCg    >  2:399099/1‑151 (MQ=255)
                                                                                                                                                 cAATGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACCGCCGCGCAATCAGGTGCCGcc  >  2:819330/1‑150 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GGGGGGCTCAGGCCTAGTGGCAAACGTGGCTGTCGACCAAGGTATAACGCACCGTGGCCGATGAATGGTTGGGGCAGGCTCAAGGCTGCAGGCGGTCAATGTGGGAGCGGGCATGCCCGCGAACACCGGCAAGGCCGGTGCCCTGCAACGCGGTGGCTGCTTCGCGGGCTCGCCCGCTCCCACAGGGAACCGCGCAAGTTCCGAGCGTTGGGGTCAGTGGAAATCCCGGCTGCGTACATCCAGCCCTTGCAGCAGCGGACTCACATCCTCCAACCGCCGCGCAATCAGGTGCCGCA  >  CP009974/5157204‑5157499

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑