| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 753,050 | A→G | intergenic (+50/‑204) | RPPX_03275 → / → RPPX_03280 | porin/NAD‑dependent dehydratase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 753,050 | 0 | A | G | 99.7% | 1173.1 / NA | 333 | intergenic (+50/‑204) | RPPX_03275/RPPX_03280 | porin/NAD‑dependent dehydratase |
| Reads supporting (aligned to +/- strand): ref base A (0/0); major base G (190/141); minor base C (1/0); total (192/141) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 334 total aligned reads displayed.
GCGTGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAGAACCACC > CP009974/752903‑753196 | gTGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAgcggcg < 1:984165/151‑1 (MQ=255) tGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATAAGGAGGCGGCGGAGACGGTGAGcggcgg > 1:5108210/1‑151 (MQ=255) gTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGAtt < 1:3417185/151‑1 (MQ=255) aaCTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTgg > 2:2582616/1‑151 (MQ=255) aCTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGc < 2:937319/151‑1 (MQ=255) tcgtcgATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCca < 1:1585114/151‑1 (MQ=255) aTTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGCGCGGCGGGTGGAGGTTGGCCGGCCggg > 2:1226567/1‑151 (MQ=255) tggCCGGGATTACAGCAATAGCGAGGTTGATGGGAACCGGTTGATCTTCGACTACCCATGGTCGCTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGggcc < 2:6265432/149‑1 (MQ=37) tCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGggcc > 1:1990881/1‑151 (MQ=255) ccGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGggccggc > 1:475260/1‑151 (MQ=255) cGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGggccggcc < 1:2927945/151‑1 (MQ=255) ggATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCctc < 2:5925285/151‑1 (MQ=255) gATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCctct < 1:1490622/151‑1 (MQ=255) aTTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCtt > 2:1431263/1‑151 (MQ=255) ttACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTc > 1:2228675/1‑151 (MQ=255) ttACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTc > 2:4524190/1‑151 (MQ=255) ttACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTc > 1:2018972/1‑151 (MQ=255) tACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTcg < 1:5239151/151‑1 (MQ=255) aCAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTcgc < 1:3745774/151‑1 (MQ=255) cggCAATAACCAGGTTCATGAGAACCGGTTGATCTCCAACCACCCATTGTCGTTGCTCTGATCATGACCTCCGGAGTTACCCGCGAATACGGCGGCGGCGGAGACGGTGAGCGGCGGGCGGCGATTGGCCCGCAGTGCCCGCCGCCTcgcc > 2:3965297/3‑150 (MQ=255) aGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCgg > 2:5456902/1‑151 (MQ=255) aaTAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTa < 2:645704/151‑1 (MQ=255) aaCGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAAc > 2:2439970/1‑151 (MQ=255) aaCGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGACGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGGCGCTTCGCGGGGaaag > 2:3107923/1‑150 (MQ=37) cGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGGCCTGCGGATTTGCCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAAccc < 2:6424974/151‑1 (MQ=255) gAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCg > 2:3573666/1‑151 (MQ=255) ttGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTcc > 2:2019173/1‑151 (MQ=255) ttGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTcc > 1:1030001/1‑151 (MQ=255) ttGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTcc > 2:5499435/1‑151 (MQ=255) tgatgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGAGTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAAACCGCTCCt > 2:487816/1‑151 (MQ=255) gatgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTa > 1:6069136/1‑151 (MQ=255) atgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTAc < 2:4758487/151‑1 (MQ=255) tgaGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACg > 2:5663341/1‑151 (MQ=255) gagaACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACgg > 2:4676472/1‑151 (MQ=255) aaCCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCg < 1:625653/151‑1 (MQ=255) aaCCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCg < 1:1534648/151‑1 (MQ=255) aCCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGa > 1:5880837/1‑151 (MQ=255) tGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCgcgc < 1:5014976/151‑1 (MQ=255) gATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCgcgcc > 2:4593607/1‑150 (MQ=255) aTCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAg < 1:6432487/151‑1 (MQ=255) aTCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAg > 1:4290035/1‑151 (MQ=255) tCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCCCCTACGGGCGACCGCGCAgg > 2:6024303/1‑151 (MQ=255) cAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCtt > 1:6015098/1‑151 (MQ=255) cAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCtt < 1:1693138/151‑1 (MQ=255) cAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCtt > 2:1163731/1‑151 (MQ=255) tACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGc > 2:1829902/1‑151 (MQ=255) aCCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGcc < 2:4212497/151‑1 (MQ=255) cccATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCt < 1:4814461/151‑1 (MQ=255) cccATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCt > 2:842932/1‑151 (MQ=255) ccATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCtt > 1:316222/1‑151 (MQ=255) ccATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCtt < 1:5302108/151‑1 (MQ=255) tttgttgTGGCTGTGATCATGACCGGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCtttt < 1:3550931/150‑1 (MQ=21) ttGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTc < 2:533558/151‑1 (MQ=255) gTCGGTGCTCTGAAGGTGTCCTGCAGATTTACCCGCGAATACGGTAGCGGCGAAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGGCGGCCTCTTCGGGGGTAATCCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCtt < 2:3039710/151‑1 (MQ=18) gTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTAcc > 2:768181/1‑151 (MQ=255) gTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTAcc > 2:3913041/1‑151 (MQ=255) gTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGCGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGCCCTCGCAGGCCTTGTGCCTTTTCTTAcc > 1:3273842/1‑151 (MQ=21) ttGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTAccc < 1:5463268/151‑1 (MQ=255) ttGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTCTCTTAccc < 2:3487819/151‑1 (MQ=255) tGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCcg > 2:5293830/1‑151 (MQ=255) tGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCCCGCCTACGGGCGACCGCGCAGGCCTCTCGCCTTTTCTTAcccc > 2:2923107/1‑150 (MQ=255) ctctGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCcgcg < 1:5645392/151‑1 (MQ=255) ctGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGCGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTCACCCGCGaa > 2:5119575/1‑151 (MQ=255) tGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGTAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGaaa < 1:4393794/151‑1 (MQ=255) gATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGaaaa < 1:2617382/151‑1 (MQ=255) aTCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAg < 1:2404088/151‑1 (MQ=255) cATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGc < 2:4290035/151‑1 (MQ=255) gACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGATCGGCGGGTGGAGAGTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCGGTCGCCCTTTCCTACCCCCGAAAAGGCCgg > 2:3753350/1‑151 (MQ=18) gACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGCGGAGACTGGCCAGCAGGGCCGGCCTCTTCGCGGGCAAACCCGCTCCGCCGGGCGACCGCGCAGGCCTCGCGCCTTCTCGTCCCCGCGGCCAGGCCgg > 2:4974187/1‑151 (MQ=17) cTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCaa > 2:5587092/1‑151 (MQ=255) cTGCGGACTTACCCGCGAATACGGTGGCGGCGGACACGGTGACCGGCGGGTGGAGAGTGGTCAGCAGGGCCGGCCTCTTCGCGGGTCAACCCGCTCCCACGGTCGGCCGCGCAGGCCTGTCGCCTCGTCTTACCCGCGAACAGGGCGGaaa > 2:5036718/1‑151 (MQ=17) ggATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAgc > 1:750385/1‑151 (MQ=255) gATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAgcc > 1:4183609/1‑151 (MQ=255) gATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAgcc > 1:2114143/1‑151 (MQ=255) aTTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAACGCCGGCCAAAgccc > 2:3626310/1‑150 (MQ=255) tttACCCGCGAATACGGTGGCGGCGGAGACGGGGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCGACGGGCGACCGCGCAGGCCTTTCGCCTTTTGTTACCCGCGAAAAGGCCGGCAAAAgccgc > 1:2829553/1‑151 (MQ=255) tgtACCCGCGAATACGGGGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAgccgc < 2:3707800/149‑1 (MQ=255) cccGCGAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCaa > 2:1917089/1‑151 (MQ=255) cgcgAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGc > 2:6182239/1‑151 (MQ=255) gcgAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGcc > 2:239387/1‑151 (MQ=255) gAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTc > 2:2747432/1‑151 (MQ=255) gAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTc > 2:5181429/1‑151 (MQ=255) gAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTc < 2:405638/151‑1 (MQ=255) gAATACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTAAAAAAAAAAAAAAGGCCGGCAAAAGCCGCCCAAGCCTc < 2:2305424/151‑1 (MQ=18) atgcGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAATCCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCAt < 2:3384258/148‑1 (MQ=255) aTACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCAt < 2:6084092/151‑1 (MQ=255) tACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTCCCCGCGAAAAGGCCGGCAAACGCCGCCCAAGCCTCAtt > 1:2701513/1‑151 (MQ=255) tACGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCAtt < 2:1532783/151‑1 (MQ=255) aCGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTg > 2:2078454/1‑151 (MQ=255) aCGGTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTg > 1:52186/1‑151 (MQ=255) ggTGGCGGCGGAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCACAAGCCGCCCAAGCCTCATTGac > 2:1493999/1‑151 (MQ=255) ggAGACGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAg > 2:1761371/1‑151 (MQ=255) ggAGACGGGGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAg < 2:740025/151‑1 (MQ=255) agaCGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAACGGCCGGCAAAAGCCGCCCCAGCCTCATTGACACCACACAGaa > 2:260915/1‑151 (MQ=255) aCGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAGAacc > 1:1053011/1‑151 (MQ=255) cGGTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAGAacca > 1:3871061/1‑151 (MQ=255) ggTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAGAaccac > 1:2658887/1‑151 (MQ=255) ggTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGCAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAGAaccac < 2:3297872/151‑1 (MQ=255) gTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCCAGCCTCATTGACAACACACAGAaccacc > 1:1285385/1‑151 (MQ=255) gTGAGCGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAGAaccacc > 1:4538837/1‑151 (MQ=255) | GCGTGAAATGGCGTAACTCGTCGATTCGCCGGGATTACAGCAATAACGAGTTTGATGAGAACCGGTTGATCTTCAACTACCCATTGTCGTTGCTCTGATCATGACCTGCGGATTTACCCGCGAATACGGTGGCGGCGGAGACGGTGAACGGCGGGTGGAGATTGGCCAGCAGGGCCGGCCTCTTCGCGGGTAAACCCGCTCCTACGGGCGACCGCGCAGGCCTTTCGCCTTTTCTTACCCGCGAAAAGGCCGGCAAAAGCCGCCCAAGCCTCATTGACAACACACAGAACCACC > CP009974/752903‑753196 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |