BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	5,595,953	T→C	L225P (CTC→CCC)	RPPX_24915 →	hypothetical protein

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	5,595,953	0	T	C	99.7%	775.4 / ‑6.3	324	L225P (CTC→CCC)	RPPX_24915	hypothetical protein
Reads supporting (aligned to +/- strand): ref base T (0/1); new base C (162/161); total (162/162)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.99e-01

Only 100 of 325 total aligned reads displayed.

CAGCCCCATGTGCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCTCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAACACACAAAACCCACCC  >  CP009974/5595805‑5596099

 aGCCCCATGTGCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTg                                                                                                                                                 <  1:1940636/151‑1 (MQ=17)

  gCCCCATGTGCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTgg                                                                                                                                                <  1:6332211/151‑1 (MQ=17)

     ccATGTGCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGAcc                                                                                                                                             >  1:2093093/1‑151 (MQ=17)

      cATGTGCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCCCTACCCCTGGAccc                                                                                                                                            >  2:4753237/1‑151 (MQ=14)

      cATGTGCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCAGCGCCCGGCACTACCCCTGGAccc                                                                                                                                            >  1:1427218/1‑151 (MQ=14)

         gtgCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAAc                                                                                                                                         >  1:6045889/1‑151 (MQ=17)

          tgctgcCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAAcc                                                                                                                                        <  2:5626446/151‑1 (MQ=17)

          tgctgcCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAAcc                                                                                                                                        <  2:5267208/151‑1 (MQ=14)

            ctgcCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGa                                                                                                                                      <  1:3848282/151‑1 (MQ=17)

             tgcCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGaa                                                                                                                                     <  2:6445337/151‑1 (MQ=14)

               ccAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGACAg                                                                                                                                   >  2:2578728/1‑151 (MQ=14)

               ccAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAg                                                                                                                                   <  1:1355881/151‑1 (MQ=17)

               ccAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAg                                                                                                                                   >  1:5548558/1‑151 (MQ=14)

                cagtcagtGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGt                                                                                                                                  >  1:1174981/1‑151 (MQ=14)

                cagtcagtGCCCGGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGt                                                                                                                                  <  2:2317609/151‑1 (MQ=17)

                 agtcagtGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCCCTACCCCTGGACCCAACCGAACGtt                                                                                                                                 >  2:5766330/1‑150 (MQ=9)

                 agtcagtGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTg                                                                                                                                 >  1:938394/1‑151 (MQ=17)

                  gtcagtGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGc                                                                                                                                <  1:1623310/151‑1 (MQ=17)

                  gtcagtGCCCAGCAAACCTGGGTCGAAGACTTCAAGCCATCCGTGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGc                                                                                                                                <  2:1328038/151‑1 (MQ=9)

                   tcagtGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGcc                                                                                                                               <  2:4649381/151‑1 (MQ=17)

                      gtGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCggt                                                                                                                            >  1:5147992/1‑151 (MQ=17)

                            tGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCggtggtggt                                                                                                                      <  2:444296/151‑1 (MQ=14)

                            tGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCggtggtggt                                                                                                                      >  1:4238968/1‑151 (MQ=17)

                             gCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGgtggtggtg                                                                                                                     <  1:1030775/151‑1 (MQ=17)

                             gCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGgtggtggtg                                                                                                                     >  1:5330202/1‑151 (MQ=17)

                              cAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGtggtggtgg                                                                                                                    >  1:496462/1‑151 (MQ=17)

                                aaCCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGgcg                                                                                                                  <  2:3336770/151‑1 (MQ=17)

                                      ggTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGcc                                                                                                            <  2:6038643/151‑1 (MQ=14)

                                        tCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGa                                                                                                          >  2:1172782/1‑151 (MQ=17)

                                          gAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATg                                                                                                        <  2:1898808/151‑1 (MQ=17)

                                           aaGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGc                                                                                                       <  2:383479/151‑1 (MQ=17)

                                            aGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGcc                                                                                                      >  1:3937480/1‑151 (MQ=17)

                                            aGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGcc                                                                                                      <  2:1001393/151‑1 (MQ=14)

                                             gACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCg                                                                                                     <  1:2992782/151‑1 (MQ=17)

                                             gACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCg                                                                                                     >  1:4423474/1‑151 (MQ=17)

                                              aCTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGa                                                                                                    >  1:648311/1‑151 (MQ=17)

                                              aCTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGa                                                                                                    <  1:4726609/151‑1 (MQ=17)

                                                ttCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAg                                                                                                  <  2:1807445/151‑1 (MQ=14)

                                                  cAAGCGAACCGATCGGCGAGCGCCGCTAACCTGCAGCAGCGACCCGATCACCGAAACCTTGCCCATCCGCACCCTCACTGCCATCGCCCGGCACTACCCCTGGACCCACCCGAAAGTGCCGGGGGTGGGGGCGCTCGCCGGTGCAGAAGGc                                                                                                <  2:3526521/151‑1 (MQ=11)

                                                     gCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATg                                                                                             <  2:574753/151‑1 (MQ=18)

                                                      ccAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATgg                                                                                            >  1:692592/1‑151 (MQ=21)

                                                           cGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTg                                                                                       <  1:3627122/151‑1 (MQ=21)

                                                            gAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGCTCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTgg                                                                                      <  2:632990/151‑1 (MQ=21)

                                                             aGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAGCCTCACTGCCATCGCCCTGCACTACCCCTGGACGCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGa                                                                                     <  2:3960807/151‑1 (MQ=255)

                                                              gcggcgCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGAc                                                                                    <  1:1741859/151‑1 (MQ=25)

                                                               cggcgCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTGCCCCTGGACCCAACCGAAAGTGCCGGCGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGAcc                                                                                   >  1:5886217/1‑151 (MQ=255)

                                                                 gcgcATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTg                                                                                 <  1:4785984/151‑1 (MQ=25)

                                                                  cgcATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGa                                                                                >  1:6027423/1‑151 (MQ=25)

                                                                   gcATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAg                                                                               >  1:291590/1‑151 (MQ=25)

                                                                   gcATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAg                                                                               <  1:50828/151‑1 (MQ=21)

                                                                        ccGCTAACCTGGAGCAGCGCCCCGATCCCCGAAACCTTGCCCATAGGCAACCTCACTGACATCGCCCGGACCTCCCTCTGGACCCAACCGAAAGTGACGGTGGTGGTGGCGCTCGCCGCTGCCGAAGGCATGGCCCTGGACCTGAGCCTGt                                                                          <  2:1604187/151‑1 (MQ=11)

                                                                          gCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCg                                                                        <  1:2536327/151‑1 (MQ=25)

                                                                           cTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTTTCgg                                                                       >  1:1862256/1‑151 (MQ=18)

                                                                           cTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCgg                                                                       <  2:5147992/151‑1 (MQ=21)

                                                                           cTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCgg                                                                       >  2:2095691/1‑151 (MQ=21)

                                                                               ccTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGtctc                                                                   >  1:3800838/1‑151 (MQ=17)

                                                                                cTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCg                                                                  >  2:5701752/1‑151 (MQ=17)

                                                                                cTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCg                                                                  <  2:1665349/151‑1 (MQ=17)

                                                                                   gAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGcc                                                               >  1:122401/1‑151 (MQ=17)

                                                                                   gAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGcc                                                               >  2:3199523/1‑151 (MQ=17)

                                                                                       agcGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTAcc                                                           <  2:4304976/151‑1 (MQ=17)

                                                                                       agcGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTCAGCCTGTCGGTCCCGGCCTccc                                                           >  2:4349604/1‑151 (MQ=255)

                                                                                        gcgcCCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCa                                                          <  2:5909453/151‑1 (MQ=14)

                                                                                         cGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAg                                                         >  2:1844004/1‑151 (MQ=14)

                                                                                         cGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAg                                                         >  1:4288124/1‑151 (MQ=14)

                                                                                          gACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGc                                                        >  2:3708265/1‑151 (MQ=17)

                                                                                          gACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGc                                                        >  1:4869751/1‑151 (MQ=17)

                                                                                            cccGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCAt                                                      <  1:3708474/151‑1 (MQ=17)

                                                                                              cGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCa                                                    <  1:3232773/151‑1 (MQ=17)

                                                                                               gATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCaa                                                   <  1:4039257/151‑1 (MQ=17)

                                                                                                aTCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAAc                                                  <  2:3439730/151‑1 (MQ=17)

                                                                                                        aaCCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGAc                                          <  2:4976303/151‑1 (MQ=17)

                                                                                                         aCCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGAcc                                         >  2:4897960/1‑151 (MQ=17)

                                                                                                          ccTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCGCGGCCCAACCGCAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCGGCATCAACTGCGTGACCt                                        <  2:4167361/151‑1 (MQ=11)

                                                                                                           cTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTg                                       >  2:5072036/1‑151 (MQ=17)

                                                                                                              gCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATg                                    <  1:5727827/151‑1 (MQ=17)

                                                                                                              gCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATg                                    <  1:2811050/151‑1 (MQ=17)

                                                                                                               cccATCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATgc                                   <  1:3459912/151‑1 (MQ=17)

                                                                                                                   tCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCCACTGCGTGACCTGATgccggc                               >  2:1722221/1‑151 (MQ=17)

                                                                                                                   tCGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATgccggc                               <  1:3131032/151‑1 (MQ=17)

                                                                                                                    cGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATgccggcc                              <  1:920640/151‑1 (MQ=17)

                                                                                                                    cGGCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATgccggcc                              >  2:5541017/1‑151 (MQ=17)

                                                                                                                     ggCAACCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATgccggccg                             >  2:1240932/1‑151 (MQ=17)

                                                                                                                        aaCCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGc                          >  2:896936/1‑151 (MQ=17)

                                                                                                                         aCCTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCCACCAGCATCAACTGCGTGACCTGATGCCGGCCGCGCa                         >  1:6072531/1‑151 (MQ=9)

                                                                                                                           cTCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGCTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAAc                       >  2:2369169/1‑151 (MQ=17)

                                                                                                                            tCACTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACt                      <  1:852332/151‑1 (MQ=17)

                                                                                                                               cTGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGa                   <  2:3102218/151‑1 (MQ=14)

                                                                                                                                tGCCATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGaa                  >  1:5488219/1‑151 (MQ=17)

                                                                                                                                  ccATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAaca                >  1:1523803/1‑151 (MQ=21)

                                                                                                                                   cATCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCt                                        <  2:4835867/126‑1 (MQ=18)

                                                                                                                                    aTCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAacacc              >  2:5408395/1‑150 (MQ=25)

                                                                                                                                     tCGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAacacac             <  1:1614875/151‑1 (MQ=25)

                                                                                                                                      cGCCCGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTCCGCGACCTGATGCCGGCCGAGCAACCAGCacacacc            >  2:691921/1‑150 (MQ=11)

                                                                                                                                        cccGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAACACACaaa          <  1:454008/151‑1 (MQ=25)

                                                                                                                                        cccGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAACACACaaa          >  2:3154635/1‑151 (MQ=21)

                                                                                                                                          cGGCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAACACACAAAac        >  2:1408449/1‑151 (MQ=21)

                                                                                                                                           ggCACTACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAACACACAAAacc       >  1:6178685/1‑151 (MQ=21)

                                                                                                                                                tACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAACACACAAAacccaccc  >  1:2290384/1‑151 (MQ=38)

                                                                                                                                                tACCCCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAACACACAAAacccaccc  <  2:2850793/151‑1 (MQ=38)

CAGCCCCATGTGCTGCCAGTCAGTGCCCTGCAAACCTGGGTCGAAGACTTCAAGCCAACCGAGCGGCGCATGCCGCTAACCTGGAGCAGCGACCCGATCACCGAAACCTTGCCCATCGGCAACCTCACTGCCATCGCCCGGCACTACCTCTGGACCCAACCGAAAGTGCCGGTGGTGGTGGCGCTCGCCGATGCCGAAGGCATGGCCCTGGACCTGAGCCTGTCGGTCTCGGCCTACCAGCATCAACTGCGTGACCTGATGCCGGCCGAGCAACTGGAACACACAAAACCCACCC  >  CP009974/5595805‑5596099

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`