| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 1,158,307 | G→A | intergenic (+1830/‑13453) | RPPX_05120 → / → RPPX_05130 | hypothetical protein/channel protein TolC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 1,158,307 | 0 | G | A | 80.9% | 923.0 / 225.3 | 480 | intergenic (+1830/‑13453) | RPPX_05120/RPPX_05130 | hypothetical protein/channel protein TolC |
| Reads supporting (aligned to +/- strand): ref base G (40/51); new base A (191/194); total (235/245) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 3.52e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 3.94e-01 | |||||||||||
Only 100 of 492 total aligned reads displayed.
CCGAAGACGGCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGC > CP009974/1158159‑1158457 | cGAAGACGGCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAactg < 1:4739294/151‑1 (MQ=255) ggCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCCACGGCGCACTGCTGCACg > 2:4314121/1‑151 (MQ=14) ggCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACg < 1:6526919/151‑1 (MQ=255) gcagcagcaTCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGt < 1:1955293/151‑1 (MQ=255) gcagcaTCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGt > 2:2119188/1‑151 (MQ=255) aTCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCa < 1:1880865/151‑1 (MQ=255) aGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCg < 2:3748433/151‑1 (MQ=255) aGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGCGGTCGCCATCg > 2:2612854/1‑151 (MQ=255) gTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGa > 2:1442633/1‑151 (MQ=255) tACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACGCTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGAGCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGAc < 2:3020638/151‑1 (MQ=11) ccGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGAcgg < 2:2029321/151‑1 (MQ=255) ccGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGAcgg < 1:3855138/151‑1 (MQ=255) cGCACCTGCAGGCACGCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGAcggc < 2:4038566/151‑1 (MQ=255) cGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGAcggc > 1:860976/1‑151 (MQ=255) cGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTCCACGTGCTCGCCATCGACCAcggc > 2:341248/1‑151 (MQ=14) aCCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACggcggc > 1:3959302/1‑151 (MQ=255) aCCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACggcggc < 2:5478920/151‑1 (MQ=255) tGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGtt < 1:1627807/151‑1 (MQ=255) aGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTcc > 1:5469468/1‑151 (MQ=255) aGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTcc > 2:1154376/1‑151 (MQ=255) gCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTc < 1:1504094/151‑1 (MQ=255) cggggtgGAAGTGCAGGACGCCACCGGCGCACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTg < 2:4813457/147‑1 (MQ=11) cGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGc < 1:4862413/151‑1 (MQ=255) gtgtGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGcc < 1:1442633/151‑1 (MQ=255) gtgGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCg < 2:2310344/151‑1 (MQ=255) ggAAGTGCATGACGCCAACGGCACACTGATTGGCACTATGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGca < 1:1313480/151‑1 (MQ=11) aGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGCCGGCGCTGCCTCCCCGCCCGcacac > 2:5893285/1‑150 (MQ=11) gTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGa > 1:1007539/1‑151 (MQ=255) gTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGa > 1:4328474/1‑151 (MQ=255) gTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGCCGGCGTTTCCCCCCCGCTCGCATAGa > 1:6305532/1‑151 (MQ=11) cATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCa > 1:2583215/1‑151 (MQ=255) tcaCGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCAcc < 2:1200194/149‑1 (MQ=255) tGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGAGGAGGGCGCCGTCGATGGCGGCGGCGTTGCCTCGGTGCGGGCACGGATCAcc > 2:3273252/1‑151 (MQ=11) aaCGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGCACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTGTCCTCGCTCCCCGCACAGATCACCGCGcccc > 1:6115661/1‑150 (MQ=11) aaCGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCg > 1:5719857/1‑151 (MQ=255) tGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGc > 2:2747557/1‑151 (MQ=255) tGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGc > 1:291787/1‑151 (MQ=255) gATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCAGCGTCACCCGCGACCCGGCCCCGGCGAACGGCGAACGGCGGCACGTGGCGGCCACCGATGCGGGCGGCGGCGCCTCGCCGCCCGCTAACCTGACCGCGCCCGGCATCAGCGcc > 2:3956188/1‑151 (MQ=2) ggCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTg < 1:3898281/151‑1 (MQ=255) ggCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCa > 2:2478160/1‑151 (MQ=9) cAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAAt < 2:2259684/151‑1 (MQ=14) cAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAAt < 1:2178823/151‑1 (MQ=9) aGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATg < 2:3684478/151‑1 (MQ=9) aGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATg < 1:1673076/151‑1 (MQ=9) aGCTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATg < 2:400746/151‑1 (MQ=9) gcgtCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGc < 2:6482602/148‑1 (MQ=255) gCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGc > 2:166545/1‑151 (MQ=9) cTTCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGcc < 2:4409850/151‑1 (MQ=12) cTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGcc > 1:6433843/1‑151 (MQ=17) ttCACCGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCg > 1:4092914/1‑151 (MQ=9) tCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCCCCGACCGAGCTGGTGATCAATGCCgg > 2:4658977/1‑150 (MQ=9) aCCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACg > 1:5602767/1‑151 (MQ=255) cGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGc > 1:3267508/1‑151 (MQ=255) cGTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGCTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGACCAATGCCGACGGc > 2:5068202/1‑151 (MQ=11) cGTCACCCTCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGc > 1:4958302/1‑151 (MQ=9) gTCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCa > 1:6217516/1‑151 (MQ=255) gTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCa < 1:309485/151‑1 (MQ=12) tCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAg > 1:5911265/1‑151 (MQ=12) tCACCCTCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAg < 1:2121105/151‑1 (MQ=255) ccACCCTGGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAg < 2:5258022/150‑1 (MQ=255) cACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGCCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGACCTGGTGATCAACGCCCTCCGCAGc > 2:1273898/1‑151 (MQ=11) tCGACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGCCGGCAGCggggg > 2:5347680/1‑150 (MQ=11) tCGACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGt > 1:2301548/1‑151 (MQ=255) cGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTc < 2:1512248/151‑1 (MQ=17) cGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTc < 1:5249394/151‑1 (MQ=12) gACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGCGCGAACTGGTGATCAATGCCGACGGCAGCGTggccc > 2:3514803/1‑148 (MQ=11) gACCCGGCCCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCa > 1:5114005/1‑151 (MQ=9) gACCCGCCTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCa > 1:3725652/1‑151 (MQ=255) ccccGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCAc < 2:84444/150‑1 (MQ=12) aCCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCAc < 1:734668/151‑1 (MQ=12) ccGCCTGAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCg < 2:6434641/151‑1 (MQ=255) cggcccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCgg < 2:4458749/146‑1 (MQ=12) cggcccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCgg > 1:5976130/6‑151 (MQ=12) cggcccAGGCCAACGGCGAACTGCTGGACCTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCgg > 2:3850247/6‑151 (MQ=255) gcacaagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGcc > 1:4575419/7‑151 (MQ=11) cccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCg < 1:2800935/149‑1 (MQ=17) cccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCg < 1:4420226/149‑1 (MQ=14) cacaagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCg > 1:5330743/6‑151 (MQ=11) cTCAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCg > 1:2356733/1‑151 (MQ=12) tCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCgg > 2:6076725/1‑150 (MQ=9) tCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGt < 2:5627945/151‑1 (MQ=16) ccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCgc < 1:1217640/150‑2 (MQ=14) ccAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGCGCTCAACGCCGACGGCAGCGCGGCCACCGGCCgc > 2:3176574/2‑150 (MQ=11) cAGGCCAACGGCGTGCTGCTGGACGTGTTCGCCATCGATGACGGCTGCGTTTCCTCGCTGCCCGCACAGCTCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTg < 2:4943035/151‑1 (MQ=11) cAGGCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCgcg > 1:3527118/1‑149 (MQ=255) aagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGc > 1:966727/3‑151 (MQ=255) aagCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGc < 1:2678623/149‑1 (MQ=255) aagCCAACGGCGAACTGCTGGACGTGGTCGCCAGCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGAGCACCGCGCCCGACATCACCGCCCCTGCCGCTCCGTCCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGc < 1:3385531/149‑1 (MQ=11) aGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGc > 2:191865/1‑151 (MQ=16) ggCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGcc < 2:692372/151‑1 (MQ=19) agCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGcc > 2:4214783/2‑151 (MQ=255) agCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGcc > 2:568741/2‑151 (MQ=255) gCCAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCg < 1:1133288/151‑1 (MQ=255) ccAACGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGa > 2:1027725/1‑151 (MQ=255) aaCGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAAc > 2:2418371/1‑151 (MQ=19) aCGGCGAACTGCTGGACGTGGTCGCCATCGATGACGGCTGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACTGCAGCGTGTTCACCGGCCGTGCCGTAcc > 2:1359519/1‑151 (MQ=11) ggCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCgg < 1:4231422/151‑1 (MQ=255) ggCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCgg < 2:708962/151‑1 (MQ=255) ggCGAACTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCgg > 1:3467479/1‑151 (MQ=255) aGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTTCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGACCGAGCTGGTGATCAATGCCGACGGCAGCGTGCTCACCGGCCGTGCCGAACCGGgcag > 2:3062416/1‑151 (MQ=255) | CCGAAGACGGCAGCAGCATCAGCGGTACCGCACCTGCAGGCACCCGTGTGGAAGTGCATGACGCCAACGGCACACTGATTGGCACTGTGGTGGCTGGCCCCGACGGCAGCTTCACCGTCACCCTCGACCCGCCTCAGGCCAACGGCGAGCTGCTGGACGTGGTCGCCATCGATGACGGCGGCGTTTCCTCGCTGCCCGCACAGATCACCGCGCCCGACATCACCGCCCCTGCCGCACCGAGCGAACTGGTGATCAATGCCGACGGCAGCGTGGTCACCGGCCGTGCCGAACCGGGCAGC > CP009974/1158159‑1158457 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |