| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 25,890 | G→A | intergenic (+315/‑256) | RPPX_00140 → / → RPPX_00145 | MarR family transcriptional regulator/(2Fe‑2S)‑binding protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 25,890 | 0 | G | A | 92.5% | 887.3 / 35.8 | 301 | intergenic (+315/‑256) | RPPX_00140/RPPX_00145 | MarR family transcriptional regulator/(2Fe‑2S)‑binding protein |
| Reads supporting (aligned to +/- strand): ref base G (4/18); new base A (147/124); total (154/147) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.41e-03 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 4.04e-01 | |||||||||||
Only 100 of 330 total aligned reads displayed.
CCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCAT > CP009974/25730‑26037 | ccAATCTCCACCCGCCGTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTg < 1:3114406/151‑1 (MQ=2) aaTCTCCACCCGCCGTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgcc < 1:3537056/151‑1 (MQ=2) aTCTCCACCCGCCGTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAACCCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgccg < 2:834435/151‑1 (MQ=2) aTCTCCACCCGCCGTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACGGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTgccg < 1:4539679/151‑1 (MQ=2) cccGCCGTTCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCAc < 2:182164/151‑1 (MQ=2) ggccgGTCACCGTGGCCGCCGCCACCGTGTTCGGGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTacc < 2:1384341/150‑1 (MQ=17) cgccgTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCCCGAAAGCGCCGGCCCTGCTGGCCAATCGCCACCCGCCGACCACCGTTacc > 2:5631033/1‑151 (MQ=255) cgtgccgccGTTGCCGCCGCCCCGGATTTCGGGGGTCACCCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccgc < 2:2016971/144‑1 (MQ=17) ccgTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccgc < 1:5990490/151‑1 (MQ=255) cgTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccgcc > 1:4411786/1‑151 (MQ=255) cctccACCGATGCCGCCGCCACCGTAGTCGGGGGTAAACCCGCTCATACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccgcc < 2:283878/147‑1 (MQ=17) tCACCGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTcg < 2:6078949/151‑1 (MQ=2) tCACCGTCGCCGCCGCCGACGTATTCGCGGGTAAACCCGCTCTTAGACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTaccgccgca < 1:2987924/151‑2 (MQ=17) ccGTTGCCGGCACCACCGTATTCGCGGGTAAACCCGCTCCTACACACAAAT‑‑‑‑‑‑‑‑‑‑GCACAGGCCTTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCTTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCgg < 1:1754877/151‑1 (MQ=2) ccGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCAcc > 1:1715692/1‑151 (MQ=255) ccGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCAcc < 1:5259762/151‑1 (MQ=255) gTTGCCGCCGCCCCCGTATTGACGGGTATACCCCCCCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGt < 2:6117371/151‑1 (MQ=17) tGCCGCCGCCCCCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTAt < 1:3809250/151‑1 (MQ=255) gccgccgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGCTCACCCGCGAAAGGGCCGGCCCTGCTGGCCTCTCTCCACCCGCCCACCACCGTTACCGCCGCCACCGtcct > 2:243938/1‑148 (MQ=17) cgccgccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTcg > 1:5871073/1‑151 (MQ=255) gccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGCTCACCGTTACCGCCGCCACCGCATTCGCcgg > 1:1573315/1‑151 (MQ=255) ccACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGCCACAGGCCGTCGTAGGAGCGGGTTCCCCCGCGAAAGGGCCGGCCCTGCCGGCCACCCTCCCCCCCCCCATCACCGCTCCCGCCCCCACCGGCCTCGCgggg > 2:1199689/1‑150 (MQ=17) aCCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCCCCCGCGAAAGGGCCGGCCCTGCTGGCCAATGTCCACCCGCCGATCACCGTTACCCCCGCCACCCTCTCcgcgcgcac > 2:6329313/1‑146 (MQ=14) aCCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTaa > 1:1193659/1‑151 (MQ=255) cgaTTCGCGGGTAGGCCCGCTCCTACACACGCACCGGGGCGTCGGCACAGGCCGTCGTAGGGGCGGGTTCGCCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGGCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAAcc < 1:5688411/149‑1 (MQ=14) tCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCCCCGTTCCCGCCGCCACCGTATTCGCGGGTAAACCCGCt > 2:3728554/1‑151 (MQ=255) gcgGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTcc > 1:909383/1‑151 (MQ=255) cgGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGGCGCCACCGTATTCGCGGGTAAACCCGCTccc > 2:5103813/1‑150 (MQ=255) gTAAACCCGCTCCTACACACGCATCGGGGGTTCTGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTaca < 1:493628/151‑1 (MQ=255) gTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTaca > 1:1018470/1‑151 (MQ=255) ccGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCa > 1:2248552/1‑151 (MQ=255) tcttccgcactcGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAATGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATc < 2:5270740/144‑1 (MQ=14) ccTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATc < 1:1991394/150‑1 (MQ=255) cTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCg > 1:3877738/1‑151 (MQ=255) tACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGt > 1:5756868/1‑151 (MQ=255) gCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGcac > 2:638060/1‑151 (MQ=255) gCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGcac > 2:4810957/1‑151 (MQ=255) cGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAgcg > 2:2292133/1‑151 (MQ=255) gTTGGGTACAGGCCGTCGTAGGAGCGGGTTCCCCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATg < 1:5432096/151‑1 (MQ=255) tgggCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATgcg < 2:2368365/149‑1 (MQ=255) gcGGCACAGGCGGTCGTAGGAGCGGGTTCAGCCGAGAAGGGGCCGGCCCTCCTGGCCAATCTCCCCCCGCCGATCACCGTTCCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATgcg < 2:346273/150‑1 (MQ=14) ggCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGcgcc > 1:5613285/1‑151 (MQ=255) ggCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGcgcc > 2:3248215/1‑151 (MQ=255) caGCCCGGCGGAGGAGCGGGTGCTCCCGCGAAAGGGCCGGCCCGGCTGGCCAATCTCCCCCCCCCGATCACCGTTACCGCCGCCACCGTATGCGCGGGTAAACCCGCTCCTACACACGCATCGGTGTTCGGCACAGCGCGATGCGCcgcgc < 2:2140738/151‑1 (MQ=17) ggCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCCCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgg < 2:2894945/151‑1 (MQ=255) gCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCATATTCGCGGGTAAACCCGCTCCTACACACGCATCGCGGTTCGGCACAGCGCGATGCGCCGCgcggg > 1:764708/1‑151 (MQ=255) ccGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgggc < 2:909383/151‑1 (MQ=255) ccGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgggc < 1:1647161/151‑1 (MQ=255) cgtcgtAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgggcg > 1:3389908/1‑151 (MQ=255) cgtcgtAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATCCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCCATGCGCCGCgcgggcc > 2:6262785/1‑150 (MQ=255) cgccgtGGGAGTGGGTTCCCCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCCCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCgcgggcg < 2:4196769/148‑1 (MQ=18) gtAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGgcgc > 2:2628092/1‑151 (MQ=255) aaGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCt < 1:1491768/150‑1 (MQ=255) aGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCCCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTc < 2:4286900/151‑1 (MQ=255) ggAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGCGCGCCGCTCg > 2:4475448/1‑151 (MQ=255) gAGTGGGTTCACCCGCGACTGGGCCGGCCCTGCTGGCCAATCTCCCCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGa < 2:5663214/151‑1 (MQ=255) gAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGa < 1:3050515/151‑1 (MQ=255) gTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCCCGCGTtctc > 2:1462277/1‑151 (MQ=255) ttCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGCTTtctcc > 2:4647901/1‑150 (MQ=255) ttCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCGCa > 1:6515277/1‑151 (MQ=255) tCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCCCCCGCCGATCACCATTACCGCCGCCACCGTATTCGCGGGTAAACGCGCTCCTACACACGCCTAGAGGATCGGCACAGCGCGATGCGCCGCGCCGGCGGCGATCGATTTCTCAg > 2:5447407/1‑151 (MQ=18) tCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAg > 1:2019641/1‑151 (MQ=255) tCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAg < 1:3248215/151‑1 (MQ=255) cACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGa > 1:1272575/1‑151 (MQ=255) cccGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCCCGGGCGGCGCTCGATTTCTCAGACg > 2:5490137/1‑151 (MQ=255) gaaatgggCCGGCCCTGCTGGCCATTCTCCACCCGCCGATAACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGTGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGa < 1:2176757/146‑1 (MQ=21) cgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATATCTCAGACGCCGa > 2:6005727/1‑151 (MQ=255) gAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGAc > 1:2784461/1‑151 (MQ=255) gAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCACACGCCGAc > 2:4077849/1‑151 (MQ=255) aaaGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACa > 1:5790907/1‑151 (MQ=255) aGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAAt < 1:5031938/151‑1 (MQ=255) aGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAAt > 1:4352448/1‑151 (MQ=255) aGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAAt > 1:2473955/1‑151 (MQ=255) aGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAAt > 1:4256510/1‑151 (MQ=255) gggCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACCATc > 2:223666/1‑151 (MQ=255) gggCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATc < 1:96066/151‑1 (MQ=255) gccggccCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCtt > 2:3870771/1‑151 (MQ=255) ccggccCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTtc > 1:2561975/1‑151 (MQ=255) gccCTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTtcctc < 1:3907418/151‑1 (MQ=255) cccTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTtcctcc > 2:2792199/1‑151 (MQ=255) ccTGCTGGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTccc < 1:6207251/151‑1 (MQ=255) ctgctgGCCAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCt < 1:3943072/151‑1 (MQ=255) gctgGCCAATCTCCCCCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGc < 1:6434439/151‑1 (MQ=255) ccAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGcccccc < 2:6459557/151‑1 (MQ=255) cAATCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCTGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCcca < 2:5030007/151‑1 (MQ=255) aaTCTCCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCccac > 1:2714067/1‑151 (MQ=255) tctcCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCccacca < 1:2419181/151‑1 (MQ=255) ctcCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCcaccac < 1:3602924/151‑1 (MQ=255) tcCACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACcaca > 2:4935109/1‑151 (MQ=255) cccACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACcaca < 1:4680838/150‑1 (MQ=255) ccACCCGCCGATCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTTCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAg > 1:283110/1‑151 (MQ=255) cgATCACCGCTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGc < 2:108284/151‑1 (MQ=255) aTCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCaa > 1:812614/1‑151 (MQ=255) aTCACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCaa > 1:4070311/1‑151 (MQ=255) cACCGTTCCCGCCGCCCCCGTATCGGCGGTTAACCCGGCTCCTACACAGGAACCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAAt < 1:187502/151‑1 (MQ=255) cACCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAAt > 2:2103050/1‑151 (MQ=255) cccGTTACCGCCGCCACCGTATTCGCGGGTAAGCCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAAtt < 1:6283901/150‑1 (MQ=255) aCCGTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAAtt > 1:4809230/1‑151 (MQ=255) gTTACCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCAt > 1:1456898/1‑151 (MQ=255) gTTACCGCCGCCACCGTATTCGCGGCTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCAt < 2:3950978/151‑1 (MQ=255) | CCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGGTTCGGCACAGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGATCACCGTTGCCGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACACGCATCGGGGTTCGGCACAGCGCGATGCGCCGCGCGGGCGGCGCTCGATTTCTCAGACGCCGACAATCTTCCTCCCTGCCCCCCACCACAGCTCTCTGCAAATTCAT > CP009974/25730‑26037 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |