Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 1,215,711 G→C intergenic (‑9/+17) RPPX_05325 ← / ← RPPX_05330 hypothetical protein/type V secretory pathway, adhesin AidA

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099741,215,7110GC99.3% 1082.7 / NA 304intergenic (‑9/+17)RPPX_05325/RPPX_05330hypothetical protein/type V secretory pathway, adhesin AidA
Reads supporting (aligned to +/- strand):  ref base G (0/2);  new base C (137/165);  total (137/167)
Fisher's exact test for biased strand distribution p-value = 5.03e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 331 total aligned reads displayed.

CCGGCCTTCTCGGCACCCATCGGGGTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCGTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTCGGCGTCCAGGCCCAGGC  >  CP009974/1215563‑1215858
                                                                                                                                                    |                                                                                                                                                   
ccGGCCTTCTCGGCACCCATCGGGGTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTgtcctc                                                                                                                                                   <  1:2023346/151‑1 (MQ=255)
 cgtccTTCTCGGCACCCATCGGGGTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGtcctcc                                                                                                                                                  >  2:4155645/4‑151 (MQ=255)
   gCCTTCTCGGCACCCATCGGGGTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTg                                                                                                                                                <  2:2810325/151‑1 (MQ=255)
      ttCTCGGCACCCATCGGGGTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGAt                                                                                                                                             <  2:1111415/151‑1 (MQ=255)
       tctcGGCACCCATCGGGGTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATc                                                                                                                                            >  1:3966502/1‑151 (MQ=255)
        ctcGGCACCCATCGGGGTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCt                                                                                                                                           >  2:4531301/1‑151 (MQ=255)
          cGGCACCCATCGGGGTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGAAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGt                                                                                                                                         >  2:2899497/1‑151 (MQ=255)
             cACCCATCGGGGTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATg                                                                                                                                      >  2:2711131/1‑151 (MQ=255)
               cccATCGGGGTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCt                                                                                                                                    <  1:3495365/151‑1 (MQ=255)
                        gTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGCTCTGTATGCTTAGAAGTTc                                                                                                                           >  1:386145/1‑151 (MQ=255)
                        gTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTc                                                                                                                           <  2:1944336/151‑1 (MQ=255)
                        gTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTc                                                                                                                           <  2:6144143/151‑1 (MQ=255)
                         tCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCa                                                                                                                          >  1:4127457/1‑151 (MQ=255)
                         tCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCa                                                                                                                          <  2:6072174/151‑1 (MQ=255)
                          cAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGACACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGGACACCGGCTTGCAGCAGACCTCTGGTCTTGTTCAGGTCGTATCCTCCTCGATCTGTATGCTTAGAAGTTctc                                                                                                                         >  2:5128663/1‑149 (MQ=255)
                              gTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCg                                                                                                                     <  1:5600340/151‑1 (MQ=255)
                                 ctgcCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAg                                                                                                                  >  1:3599053/1‑151 (MQ=255)
                                  tgcCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCCTGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGc                                                                                                                 >  2:3126587/1‑151 (MQ=255)
                                    cccAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGCTCTGTATGCTTAGAAGTTCACGCCGAAGCTg                                                                                                               >  1:5494741/1‑151 (MQ=255)
                                    cccAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTg                                                                                                               <  1:4405237/151‑1 (MQ=255)
                                     ccAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGa                                                                                                              <  2:4382380/151‑1 (MQ=255)
                                     ccAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGa                                                                                                              <  1:2456395/151‑1 (MQ=255)
                                      cAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAg                                                                                                             <  1:835179/151‑1 (MQ=255)
                                      cAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAg                                                                                                             >  2:5927027/1‑151 (MQ=255)
                                       aGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTa                                                                                                                                  >  1:4271213/1‑129 (MQ=255)
                                       aGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAgg                                                                                                            >  2:6520438/1‑151 (MQ=255)
                                        gCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAggg                                                                                                           <  2:1015092/151‑1 (MQ=255)
                                        gCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAggg                                                                                                           <  1:4968802/151‑1 (MQ=255)
                                        gCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAggg                                                                                                           <  1:6185269/151‑1 (MQ=255)
                                          ttGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGcg                                                                                                         <  1:1618465/151‑1 (MQ=255)
                                          ttGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGcg                                                                                                         >  1:6497623/1‑151 (MQ=255)
                                          ttGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTATATGCTTAGAAGTTCACGCCGAAGCTGAGGGcg                                                                                                         <  1:3446231/151‑1 (MQ=255)
                                           tGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCGGAAGCTGAGGGcga                                                                                                        >  2:3776406/1‑151 (MQ=255)
                                           tGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGcga                                                                                                        >  2:5749002/1‑151 (MQ=255)
                                             gccgccTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGcgacg                                                                                                      <  2:2454586/151‑1 (MQ=255)
                                                  cTCATCGGCGGATACTGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTATGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTc                                                                                                 >  2:3576774/1‑151 (MQ=255)
                                                  cTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTc                                                                                                 <  1:1440412/151‑1 (MQ=255)
                                                  cTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTc                                                                                                 >  2:470340/1‑151 (MQ=255)
                                                   gaaTCGACGGATACCGCAGCAATGACGCTGGTCGCCAGAAGGGACAGGCCCAGAACACAGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTcg                                                                                                <  2:3020641/149‑1 (MQ=255)
                                                    cATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTcgc                                                                                               >  2:577713/1‑151 (MQ=255)
                                                     aTCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTcgcg                                                                                              >  2:720218/1‑151 (MQ=255)
                                                     aTCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTcgcg                                                                                              <  1:4460877/151‑1 (MQ=255)
                                                     aTCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTcgcg                                                                                              >  1:1534455/1‑151 (MQ=255)
                                                       cggcggATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGt                                                                                            <  1:3090553/151‑1 (MQ=255)
                                                         gcggATGCCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCa                                                                                          <  2:493804/151‑1 (MQ=255)
                                                          cggATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCAt                                                                                         >  2:2592937/1‑151 (MQ=255)
                                                                   cAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGc                                                                                <  2:3187943/151‑1 (MQ=255)
                                                                    aGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCt                                                                               <  2:6192113/151‑1 (MQ=255)
                                                                      ccATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGt                                                                             <  1:5982790/151‑1 (MQ=255)
                                                                        aTGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTAc                                                                           <  1:685176/151‑1 (MQ=255)
                                                                         ggACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACt                                                                          <  2:2389820/150‑1 (MQ=255)
                                                                            cGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGc                                                                       <  1:577713/151‑1 (MQ=255)
                                                                            cGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGc                                                                       <  1:4640471/151‑1 (MQ=255)
                                                                             gCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGcc                                                                      <  1:3294279/151‑1 (MQ=255)
                                                                                   cGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCgaa                                                                >  1:1282604/1‑151 (MQ=255)
                                                                                    gCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCgaag                                                               <  1:226344/151‑1 (MQ=255)
                                                                                      cagcagGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCgaagaa                                                             >  1:4054918/1‑151 (MQ=255)
                                                                                          agGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTg                                                         >  1:2373509/1‑151 (MQ=255)
                                                                                           gggACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTgg                                                        <  1:5645252/151‑1 (MQ=255)
                                                                                            ggACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGt                                                       <  1:5517739/151‑1 (MQ=255)
                                                                                             gACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGta                                                      <  1:625614/151‑1 (MQ=255)
                                                                                             gACAGGCCCAGTACAACGGCTTGCAGCGGACTTCTGGTCTTGTTCATGTCGTGTACTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGAGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGta                                                      <  1:1221787/151‑1 (MQ=255)
                                                                                               cAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGtata                                                    <  2:1441150/151‑1 (MQ=255)
                                                                                                aGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATAc                                                   <  2:568904/151‑1 (MQ=255)
                                                                                                aGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATAc                                                   >  1:6311738/1‑151 (MQ=255)
                                                                                                 ggCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACg                                                  <  2:522287/151‑1 (MQ=255)
                                                                                                 ggCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTATCCTCCTGGATCTGTATGATTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGCTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACg                                                  <  2:4588270/151‑1 (MQ=255)
                                                                                                  gCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGa                                                 >  1:1787120/1‑151 (MQ=255)
                                                                                                  gCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGa                                                 <  2:3415373/151‑1 (MQ=255)
                                                                                                    ccAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACa                                               <  1:3545951/151‑1 (MQ=255)
                                                                                                     cAGTACACGGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAg                                              <  2:5568292/151‑1 (MQ=255)
                                                                                                      aGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAgg                                             >  1:108929/1‑151 (MQ=255)
                                                                                                      aGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAgg                                             >  1:1002684/1‑151 (MQ=255)
                                                                                                         acacCGGGTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTc                                          <  2:4003578/151‑1 (MQ=255)
                                                                                                          cacCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCg                                         <  1:2128796/151‑1 (MQ=255)
                                                                                                            ccGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGcc                                       <  1:4716403/151‑1 (MQ=255)
                                                                                                            ccGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGcc                                       >  1:5241228/1‑151 (MQ=255)
                                                                                                              ggCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGt                                     <  1:2736529/151‑1 (MQ=255)
                                                                                                                cTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGtat                                   >  1:265656/1‑151 (MQ=255)
                                                                                                                cTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGtat                                   >  1:4765699/1‑151 (MQ=255)
                                                                                                                  tGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAg                                 <  1:898277/151‑1 (MQ=255)
                                                                                                                     agcagACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGgtg                              >  2:2310006/1‑151 (MQ=255)
                                                                                                                     agcagACTTCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGgtg                              >  1:2971907/1‑151 (MQ=255)
                                                                                                                            ttCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGt                       >  2:1614696/1‑151 (MQ=255)
                                                                                                                            ttCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGt                       <  1:319899/151‑1 (MQ=255)
                                                                                                                             tCTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTa                      <  2:3947906/151‑1 (MQ=255)
                                                                                                                              cTGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTAc                     <  2:1246177/151‑1 (MQ=255)
                                                                                                                               tGGTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACt                    >  2:21390/1‑151 (MQ=255)
                                                                                                                                ggTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTc                   <  2:3051952/151‑1 (MQ=255)
                                                                                                                                ggTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTc                   >  2:2066666/1‑151 (MQ=255)
                                                                                                                                ggTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGCTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTc                   >  1:4925805/1‑151 (MQ=255)
                                                                                                                                 gTCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTCg                  >  1:1686396/1‑151 (MQ=255)
                                                                                                                                  tCTTGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTCgg                 >  1:138194/1‑151 (MQ=255)
                                                                                                                                  tCTTGTTCATGTCGTGGCCTCTTGGATCTGTATGGTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGGCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTCgg                 <  2:5414915/151‑1 (MQ=255)
                                                                                                                                   cTTGGTCATGTCGTGTCCTGCTGGATCTGTATGCGTAGAGGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGGACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTCGGc                <  1:5179854/151‑1 (MQ=255)
                                                                                                                                     tGTTCATGTCGTGTCCTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTCGGCGt              <  2:1625464/151‑1 (MQ=255)
                                                                                                                                            gtcgtgtcctCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTCGGCGTccaggcc       >  2:914104/1‑151 (MQ=255)
                                                                                                                                            gtcgtgtcctCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTCGGCGTccaggcc       >  1:2967201/1‑151 (MQ=255)
                                                                                                                                              cgtgtcctCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTCGGCGTccaggccca     >  2:147937/1‑151 (MQ=255)
                                                                                                                                                 gtcctcCTGGATCTGTATGCTTAGAAGTGCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTCGGCGTccaggcccaggc  >  1:6536545/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
CCGGCCTTCTCGGCACCCATCGGGGTCAGGGTGCTGCCCAGCTTGGCCGCCTCATCGGCGGATACCGCAGCCATGACGCTGGTCGCCAGCAGGGACAGGCCCAGTACACCGGCTTGCAGCAGACTTCTGGTCTTGTTCATGTCGTGTCGTCCTGGATCTGTATGCTTAGAAGTTCACGCCGAAGCTGAGGGCGACGAAGTCGCGGTCATCCACGGTGCTGTACTTGCCGTCGAAGAAGTTGGTATACGACAGGCTCGCCGTATAGGTGTTCTGGTACTCGGCGTCCAGGCCCAGGC  >  CP009974/1215563‑1215858

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: