| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 1,247,078 | G→C | intergenic (‑212/‑599) | RPPX_05495 ← / → RPPX_05500 | glutamyl‑tRNA reductase/hypothetical protein |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 1,247,078 | 0 | G | C | 99.5% | 692.8 / NA | 203 | intergenic (‑212/‑599) | RPPX_05495/RPPX_05500 | glutamyl‑tRNA reductase/hypothetical protein |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base C (83/119); minor base T (0/1); total (83/120) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 212 total aligned reads displayed.
ACCGTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGACAGT > CP009974/1246930‑1247226 | ccGTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCgcagg > 1:5826049/1‑151 (MQ=255) tttCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCgcaggga < 1:2001969/150‑1 (MQ=255) gTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATTCTGTCCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCgcaggga > 2:2427273/1‑151 (MQ=255) tCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGcagggagg < 1:4731578/151‑1 (MQ=255) gCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTg < 1:5113140/151‑1 (MQ=255) cTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGa > 2:2043657/1‑151 (MQ=255) tATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGAc > 1:5514248/1‑151 (MQ=255) tATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGAc > 2:3836804/1‑151 (MQ=255) aTTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACg < 2:1190141/151‑1 (MQ=255) aTTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTATCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGAACCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTACGCAGGGAGGTGACg < 1:2540494/151‑1 (MQ=255) aTTGTGCTGATAGTCCGGCGGCTATGGCCTTTTCGTAGCCTGACCCAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACg < 2:5037331/151‑1 (MQ=255) ttGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACgg < 1:1260551/151‑1 (MQ=255) ttGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACgg < 2:5611749/151‑1 (MQ=255) gCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCAt < 2:2434638/151‑1 (MQ=255) cTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATg < 2:1851662/151‑1 (MQ=255) cTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATg < 1:5607771/151‑1 (MQ=255) aTAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGAt < 2:3616213/151‑1 (MQ=255) aTAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGAt < 1:325671/151‑1 (MQ=255) gTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGcc > 1:1570481/1‑151 (MQ=255) tCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCCGGAGGCCGAACGCAGGCCTTGCGCAGGGCGGCGACGGGCATGGACGccc > 1:5294508/1‑151 (MQ=255) cgaTCGCCCTTTCGTAGCCTGCCCTGGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAgcg < 2:4146401/149‑1 (MQ=255) cTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAgcg > 2:5721621/1‑151 (MQ=255) cTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAgcg < 1:5699700/151‑1 (MQ=255) cTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAgcg < 2:4876175/151‑1 (MQ=255) aTCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCt < 2:150836/151‑1 (MQ=255) aTCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCGTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCt < 2:3028621/151‑1 (MQ=255) cGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgt < 1:2831058/151‑2 (MQ=255) cGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgt > 2:642101/1‑150 (MQ=255) gCCTTTTCGTAGGCTGCCCTGGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTGTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgtg < 2:3394758/151‑3 (MQ=255) ccTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGCACGTGACGGGCATGCATGCCCGTCAAGCGCTgtgc > 1:1857707/1‑148 (MQ=255) ttCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTgtgcccca < 1:2339665/151‑8 (MQ=255) ggCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATg < 2:5950846/150‑1 (MQ=255) ccTGCCCTGGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATggg < 2:3798918/151‑1 (MQ=17) ccTGCCCTAGCGGTGTTTTCATGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTACGCGACTTCAGGAGGCCGAACGCAGGCCTTACGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATggg < 1:2457307/151‑1 (MQ=17) cccTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCt < 2:2684424/151‑1 (MQ=255) aGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAg < 2:4155287/151‑1 (MQ=255) aGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAg < 1:4386450/151‑1 (MQ=255) aGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAg < 1:2043657/151‑1 (MQ=255) cGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAgcg < 1:4554325/151‑1 (MQ=255) gtgtTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGcgcg > 2:6185489/1‑151 (MQ=255) tgtTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCgg > 2:1662960/1‑151 (MQ=255) ttttCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGtc < 1:5568053/151‑1 (MQ=255) ttttCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGtc > 1:98814/1‑151 (MQ=255) ttttCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGtc < 2:5514248/151‑1 (MQ=255) tttCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGtcc > 1:902116/1‑151 (MQ=255) ttCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGCACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGTGCTGTGGCCGC‑TGATTGCGCCTGCGGCGCCGccct > 2:5689776/1‑151 (MQ=14) ttCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGtcct < 2:674480/151‑1 (MQ=255) tCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGtcctc < 2:3248241/151‑1 (MQ=255) tCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGtcctc < 2:1973674/151‑1 (MQ=255) ggTGTTGCCTGCTTTTGATCTGGCTGTTGTTCCGGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCg < 2:5453814/151‑1 (MQ=14) tCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCggg < 1:382886/151‑1 (MQ=255) cTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGa < 1:354865/151‑1 (MQ=255) cTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGa > 1:4454340/1‑151 (MQ=255) cTTGCCGGCTTTTGAGCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGa < 1:653067/151‑1 (MQ=255) ttGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAg < 1:609872/151‑1 (MQ=255) ttGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAg < 1:5405991/151‑1 (MQ=255) cGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAg < 1:147648/151‑1 (MQ=255) cGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAg > 2:2287388/1‑151 (MQ=255) ggCTTTTGATCTGGCTTTTGATCCTTACCTTGTTCTTCGCGTCTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGTGGTGTCGCGCCTGGTTGCCCGTCTTACGCTG‑TGTCCCAGGCTGTGGCCGTCCGCGCGGTCCTCCCGTGATCACGc > 2:2921116/1‑151 (MQ=2) gCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGcc < 2:6029467/151‑1 (MQ=255) gCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGcc < 2:2760567/151‑1 (MQ=255) cTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGccc < 1:151401/151‑1 (MQ=255) cTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGccc > 1:2778562/1‑151 (MQ=255) ttttGATCTGGCTTTTGACCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGTGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCt < 2:717048/151‑1 (MQ=14) tttGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTa > 1:4876978/1‑151 (MQ=255) ttGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTAc < 1:2231400/151‑1 (MQ=255) ttGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTAc > 2:4413542/1‑151 (MQ=255) ttGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTAc < 2:345442/151‑1 (MQ=255) aTCTGGCTTGTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCt < 2:4060890/151‑1 (MQ=14) ggCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGc < 2:1033706/151‑1 (MQ=255) tGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGGGCAAGCCCTACGCTCGGCCTCCTg > 2:2462926/1‑151 (MQ=18) gATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGa < 1:513223/151‑1 (MQ=255) aTCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGaa < 1:2960450/151‑1 (MQ=255) aTCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGaa > 1:4135646/1‑151 (MQ=255) tCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑CGCCCCAGGATGGGGACTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTCCGCTCGGCCTCCTGacg > 2:6268250/1‑149 (MQ=17) aCCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCa > 1:212551/1‑151 (MQ=255) ccTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCaa > 1:619136/1‑151 (MQ=255) ccTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCaa < 1:1178206/151‑1 (MQ=255) gtgttCGCGACTTCATGAGGCCGGACGGAGGCCTTGCGTGGGTGGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAGGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGc < 2:5371333/148‑1 (MQ=17) tCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCa > 1:1058211/1‑151 (MQ=255) gcgACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGcc > 1:3920417/1‑151 (MQ=255) gcgACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGcc < 1:2640429/151‑1 (MQ=255) gcgACTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGcc > 1:5993978/1‑151 (MQ=255) cTTCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGAt > 2:143423/1‑151 (MQ=255) tCAGGAGGCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCa < 1:4063630/151‑1 (MQ=255) cAGGACGCCGACCGCAGGCCTGGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCaa < 2:6406134/151‑1 (MQ=18) ggaggCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAAcc > 1:3239715/1‑151 (MQ=255) gaggCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACcg > 1:4188088/1‑151 (MQ=255) gaggCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACcg < 2:1800938/151‑1 (MQ=255) aggCCGAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACcgc > 2:318429/1‑151 (MQ=255) gAACGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCgcgcgcc > 2:2205131/1‑150 (MQ=255) aaCGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCtt < 1:1273821/151‑1 (MQ=255) aCGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTa > 1:6262707/1‑151 (MQ=255) cGCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAg > 2:3993361/1‑151 (MQ=255) gCAGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGa > 2:2500913/1‑151 (MQ=255) aGGCCTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAg > 1:2309969/1‑151 (MQ=255) ctggcgcAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGAc < 2:4747379/148‑1 (MQ=255) cTTGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGAc < 1:6445859/151‑1 (MQ=255) ttGCGCAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGACa < 1:1233556/151‑1 (MQ=255) gcgcAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTG‑TGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGACAGt > 1:3630518/1‑151 (MQ=255) | ACCGTTCGCTATTGTGCTGATAGTCCTGCGGCTATCGCCTTTTCGTAGCCTGCCCTAGCGGTGTTTTCAGGTCTTGCCGGCTTTTGATCTGGCTTTTGATCCTGACCTTGATCTTCGCGACTTCAGGAGGCCGAACGCAGGCCTTGCGGAGGGAGGTGACGGGCATGGATGCCCGTCAAGCGCTGAGGCCCCAGGATGGGGCCTGCAGCGCGGTCCTCCCGGGAGCAAGCCCTACGCTCGGCCTCCTGAAGTCGCAATCTGCAGCGCCTGATCAACCGCGCGCTTAGAAGCGACAGT > CP009974/1246930‑1247226 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |