BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	1,358,523	C→A	intergenic (+384/+2306)	RPPX_05970 → / ← RPPX_05980	hypothetical protein/tRNA‑Thr

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	1,358,523	0	C	A	99.0%	1103.3 / NA	313	intergenic (+384/+2306)	RPPX_05970/RPPX_05980	hypothetical protein/tRNA‑Thr
Reads supporting (aligned to +/- strand): ref base C (3/0); new base A (159/150); total (163/150)
Fisher's exact test for biased strand distribution p-value = 2.49e-01
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00

Only 100 of 313 total aligned reads displayed.

GGACTGGCGGCTCCTTACGTCCGGGAGCAAGGGCATCTCATGATCTGGCCTCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACCGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTGCA  >  CP009974/1358375‑1358670

ggACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAgg                                                                                                                                                   >  2:2029233/1‑151 (MQ=14)

ggACTGGCGGCTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAgg                                                                                                                                                   <  2:1287577/151‑1 (MQ=14)

     ggcggaTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCCGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCAt                                                                                                                                              <  2:3578478/151‑1 (MQ=14)

       cggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGc                                                                                                                                            <  1:4225816/151‑1 (MQ=14)

       cggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGc                                                                                                                                            >  2:591844/1‑151 (MQ=14)

        ggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGTGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATTCACCCCTGCGATGACCGGGGCATGcc                                                                                                                                           >  1:3886293/1‑151 (MQ=14)

        ggcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGcc                                                                                                                                           >  2:5312437/1‑151 (MQ=14)

         gcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCt                                                                                                                                          <  1:5145111/151‑1 (MQ=14)

         gcTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCt                                                                                                                                          <  1:4063077/151‑1 (MQ=14)

          cTCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTg                                                                                                                                         <  2:3673454/151‑1 (MQ=14)

           tCCTTAAGACCGGGAGCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGa                                                                                                                                        <  1:5754040/151‑1 (MQ=255)

                         ggCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTGCCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTg                                                                                                                          <  2:4964895/150‑1 (MQ=255)

                          gCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGc                                                                                                                         >  2:1206894/1‑151 (MQ=255)

                          gCAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGc                                                                                                                         <  2:678779/151‑1 (MQ=255)

                           cAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGCGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCa                                                                                                                        >  2:2439698/1‑151 (MQ=255)

                           cAAGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCa                                                                                                                        >  1:5435767/1‑151 (MQ=255)

                            aaGGGCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAg                                                                                                                       <  2:1351972/151‑1 (MQ=255)

                            aaGGGCATCTCATGAGCTGGCTCCCTGAGCACCGTTACCGGTGGGGGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAg                                                                                                                       <  2:3451140/151‑1 (MQ=255)

                              gggCATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGGGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGAGCAGTc                                                                                                                     >  2:5527881/1‑151 (MQ=14)

                                 cATCTCATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCAt                                                                                                                  >  1:4687839/1‑151 (MQ=255)

                                   tctcATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTc                                                                                                                >  1:5386406/1‑151 (MQ=255)

                                      cATGATCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCtt                                                                                                             <  1:4804656/151‑1 (MQ=255)

                                          aTCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTc                                                                                                         <  2:3528135/151‑1 (MQ=255)

                                          aTCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTc                                                                                                         >  2:4239720/1‑151 (MQ=255)

                                           tCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCt                                                                                                        <  1:2925911/151‑1 (MQ=255)

                                           tCTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCt                                                                                                        <  1:2263967/151‑1 (MQ=255)

                                            cTGGCTCCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTg                                                                                                       <  1:5801823/151‑1 (MQ=255)

                                              ggctccctGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCg                                                                                                     <  2:1053587/146‑1 (MQ=255)

                                                ctccctGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGc                                                                                                   >  1:4074473/4‑151 (MQ=255)

                                                 tccctGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCa                                                                                                  >  1:1001569/3‑151 (MQ=255)

                                                 tccctGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCa                                                                                                  <  2:2935091/149‑1 (MQ=255)

                                                   cctGGGGACCGTTGCCGGTGGGCGGGTGGAGGCTGCATTGGCTGGCGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCAcc                                                                                                <  2:1897363/151‑1 (MQ=255)

                                                   cctGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCAcc                                                                                                <  2:5778457/151‑1 (MQ=255)

                                                     tGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACcat                                                                                              >  2:4291490/1‑151 (MQ=255)

                                                             gctACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACTAGACCAGTCCCGCGCGCCCCTGAGCCGGGTCCACGCAGCACTGACATGACCGCGGCATGCCTCACTGTCAGTCAGGTGCAGACCCTCCTCTTGTCTGCGGCACCATCAGCTACa                                                                                      >  2:3991302/3‑151 (MQ=11)

                                                             gTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACa                                                                                      <  1:6066718/151‑1 (MQ=255)

                                                              ttACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACaa                                                                                     >  1:433414/1‑151 (MQ=255)

                                                               tACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAAc                                                                                    <  1:1585999/151‑1 (MQ=255)

                                                                 ccGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACCACGc                                                                                  >  2:3915345/1‑151 (MQ=255)

                                                                  cGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCt                                                                                 >  1:5279063/1‑151 (MQ=255)

                                                                  cGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCt                                                                                 <  1:591819/151‑1 (MQ=255)

                                                                  cGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCt                                                                                 <  2:1569404/151‑1 (MQ=255)

                                                                  cGGTGGGCGGGGGGAGGCTGCATGGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCt                                                                                 >  2:22183/1‑151 (MQ=255)

                                                                     tGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGtt                                                                              <  1:1929585/151‑1 (MQ=255)

                                                                      gggCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTg                                                                             <  1:4447851/151‑1 (MQ=255)

                                                                       ggCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGc                                                                            >  1:6406842/1‑151 (MQ=255)

                                                                         ggggTGGAGGCTGCATTGGCCGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTg                                                                          <  1:5054018/150‑1 (MQ=255)

                                                                            gTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATGCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTg                                                                       <  2:6234363/151‑1 (MQ=255)

                                                                             tGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGa                                                                      <  1:3124328/151‑1 (MQ=255)

                                                                             tGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGa                                                                      <  2:1109016/151‑1 (MQ=255)

                                                                             tGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGa                                                                      >  2:2815375/1‑151 (MQ=255)

                                                                             tGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGa                                                                      <  1:6160362/151‑1 (MQ=255)

                                                                              ggAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGAc                                                                     >  2:6065954/1‑151 (MQ=255)

                                                                                   cTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCgg                                                                >  1:494768/1‑151 (MQ=255)

                                                                                     gCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCg                                                              >  1:887770/1‑151 (MQ=255)

                                                                                      cATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGt                                                             >  2:4349115/1‑151 (MQ=255)

                                                                                       aTTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGtt                                                            <  2:803147/151‑1 (MQ=255)

                                                                                         tGGCTGATGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTg                                                          <  2:4009663/151‑1 (MQ=255)

                                                                                         tGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTg                                                          >  1:1523483/1‑151 (MQ=255)

                                                                                         tGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGACGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTg                                                          <  1:3829391/151‑1 (MQ=255)

                                                                                          gtcTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGt                                                         >  2:446536/3‑151 (MQ=255)

                                                                                            cTGACGAGACCAGTGCCGCGAGGTCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCa                                                       <  2:2317935/151‑1 (MQ=255)

                                                                                            cTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCa                                                       >  1:5173665/1‑151 (MQ=255)

                                                                                             tcaCGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGCTGCATGCCAGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACCACGCTGTTGCTGGTGACATCGGCGTTTGTCAc                                                      <  1:3040920/149‑1 (MQ=14)

                                                                                             tGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCAc                                                      >  1:1764463/1‑151 (MQ=255)

                                                                                              gACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACg                                                     <  2:4067536/151‑1 (MQ=255)

                                                                                              gACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACg                                                     <  1:3266840/151‑1 (MQ=255)

                                                                                              gACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACg                                                     >  2:197494/1‑151 (MQ=255)

                                                                                                cGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGcc                                                   <  1:773014/151‑1 (MQ=255)

                                                                                                cGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGcc                                                   >  2:1274566/1‑151 (MQ=255)

                                                                                                 gagaCCCGTGCCGCGAGATCCTGAGCCGAGTGCACGCAGCACTGCGATGACAGGCGCATGCCTGACTCTCAGTCAGGTGCAGTCCATTCGTTGGTCAGAAGCACCATCAACTAAAACGCTGTTGCTTGTTACATCGGCGTTTGTCACGCCg                                                  >  2:4521988/1‑151 (MQ=11)

                                                                                                 gagaCCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCg                                                  <  2:4205510/151‑1 (MQ=255)

                                                                                                  agaCCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGa                                                 <  2:2677242/151‑1 (MQ=255)

                                                                                                  agaCCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGa                                                 >  1:5977751/1‑151 (MQ=255)

                                                                                                  agaCCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGa                                                 >  1:139681/1‑151 (MQ=255)

                                                                                                    aCCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGAtt                                               <  2:142091/151‑1 (MQ=255)

                                                                                                     ccAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTg                                              >  1:5591157/1‑151 (MQ=255)

                                                                                                      cAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGt                                             <  2:6466316/151‑1 (MQ=255)

                                                                                                          gCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACg                                         <  2:1705238/151‑1 (MQ=255)

                                                                                                              cgAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTg                                     <  1:2127363/151‑1 (MQ=255)

                                                                                                               gagaTCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTgg                                    >  1:4129535/1‑151 (MQ=255)

                                                                                                                 gaTCCTGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAg                                  <  1:1113800/151‑1 (MQ=255)

                                                                                                                  agccggAGCGGGGTGCATGGAGCGCTGCGGTGGCAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGt                                 <  1:3362235/146‑1 (MQ=14)

                                                                                                                      tGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGcc                             <  2:5488187/151‑1 (MQ=255)

                                                                                                                      tGAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGcc                             <  2:48422/151‑1 (MQ=255)

                                                                                                                       gAGCCGGGTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCg                            <  1:3620275/151‑1 (MQ=255)

                                                                                                                              gTGCATGCAGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGcc                     >  1:4502162/1‑151 (MQ=255)

                                                                                                                               tgcatgcaGCACTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTa                                >  1:3543705/1‑139 (MQ=255)

                                                                                                                                    gcagcaCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGc               <  2:3414419/151‑1 (MQ=255)

                                                                                                                                      agcaCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGa             >  2:6183244/1‑151 (MQ=255)

                                                                                                                                       gcaCTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGAt            <  2:4108866/151‑1 (MQ=255)

                                                                                                                                        taCTGCGATTACAGGGGGATGCCTGGCTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCAACATCATCTACAACGCTGTTGCTGGTGAGCTCGGCTTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATc           <  2:1672036/150‑1 (MQ=14)

                                                                                                                                          cTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAg         <  2:5661959/151‑1 (MQ=255)

                                                                                                                                          cTGCGATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAg         >  1:3462156/1‑151 (MQ=255)

                                                                                                                                              gATGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCt     >  1:6253810/1‑151 (MQ=255)

                                                                                                                                               aTGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTTGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCGGATTGTGACGAGTAGAGTAGCCGCAAAGCCATGTGCGATCAGTGCTg    <  2:5386406/151‑1 (MQ=14)

                                                                                                                                               aTGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTg    >  2:5847619/1‑151 (MQ=255)

                                                                                                                                               aTGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTg    >  1:2704740/1‑151 (MQ=255)

                                                                                                                                               aTGACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTg    <  2:5061599/151‑1 (MQ=255)

                                                                                                                                                 gACAGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTgca  <  2:907521/151‑1 (MQ=255)

GGACTGGCGGCTCCTTACGTCCGGGAGCAAGGGCATCTCATGATCTGGCCTCCTGAGCACCGTTACCGGTGGGCGGGTGGAGGCTGCATTGGCTGACGAGACCAGTGCCGCGAGATCCTGAGCCGGGTGCATGCAGCACTGCGATGACCGGGGCATGCCTGACTGTCAGTCAGGTGCAGTCCATTCCTTGGTCTGCGGCACCATCATCTACAACGCTGTTGCTGGTGACATCGGCGTTTGTCACGCCGATTGTCACGAGTGGAGTAGCCGCAAAGCCATGTGCGATCAGGGCTGCA  >  CP009974/1358375‑1358670

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 37 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`