Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 1,449,631 T→C intergenic (+144/‑45) RPPX_06395 → / → RPPX_06400 chemotaxis protein/thiol:disulfide interchange protein

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099741,449,6310TC100.0% 1171.2 / NA 325intergenic (+144/‑45)RPPX_06395/RPPX_06400chemotaxis protein/thiol:disulfide interchange protein
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (170/155);  total (170/155)

Only 100 of 327 total aligned reads displayed.

TCTGAGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGTGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGCGCCGCTTCGC  >  CP009974/1449483‑1449778
                                                                                                                                                    |                                                                                                                                                   
tCTGAGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTgcgc                                                                                                                                                   >  2:577056/1‑151 (MQ=255)
  tGAGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCAt                                                                                                                                                 <  1:1014703/151‑1 (MQ=255)
   gAGTCGGCGGGTGGTCGCGAGGACAGGTGTAGCACCTGAAGAGGGTTTGACGTGATATGTGTTGCGTGGGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTACACCCGCTCCTACGTTTGTTTCGGGCAGATTATTCCTGCGCATc                                                                                                                                                <  2:6121943/151‑1 (MQ=25)
   gAGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATc                                                                                                                                                <  1:5590244/151‑1 (MQ=255)
   gAGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTCCGCATc                                                                                                                                                >  1:3091703/1‑151 (MQ=255)
     gTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCg                                                                                                                                              >  2:2033706/1‑151 (MQ=255)
     gTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCg                                                                                                                                              <  1:630382/151‑1 (MQ=255)
     gTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCg                                                                                                                                              >  1:2671270/1‑151 (MQ=255)
         gcggGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTAt                                                                                                                                          >  2:4588565/1‑151 (MQ=255)
           gggTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCa                                                                                                                                        >  1:2521974/1‑151 (MQ=255)
           gggTGGTCGCCAGAACAGGAGTAGCAACAGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCa                                                                                                                                        >  2:3352367/1‑151 (MQ=255)
            ggtggtCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCAt                                                                                                                                       <  1:3879069/151‑1 (MQ=255)
             gtggtCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATg                                                                                                                                      <  1:5963489/151‑1 (MQ=255)
              tggtCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGc                                                                                                                                     >  1:3501084/1‑151 (MQ=255)
              tggtCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTACTACGTTTGTTTCGGGCCAATTATTCCTGCGCATACGTTATCATGc                                                                                                                                     >  2:3668533/1‑151 (MQ=255)
                 tCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCgg                                                                                                                                  <  2:5037511/151‑1 (MQ=255)
                  cGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGCAATCCCGCTCCTACGTGTGCTTCTGGCCAATTATTCCTGCGCATCCGTTATCATGCCggg                                                                                                                                 >  2:4333859/1‑151 (MQ=37)
                       ggACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTCAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGt                                                                                                                            >  1:3964046/1‑151 (MQ=255)
                       ggACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGt                                                                                                                            >  1:6233119/1‑151 (MQ=255)
                         aCAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTc                                                                                                                          <  1:4935647/151‑1 (MQ=255)
                          cAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGCTATCATGCCGGGCACGTTcc                                                                                                                         >  2:1456231/1‑151 (MQ=255)
                           aGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCa                                                                                                                        >  2:349632/1‑151 (MQ=255)
                              tgtAGCAACTGAAGAGGGTGTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCt                                                                                                                     <  2:383790/151‑1 (MQ=255)
                                tAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTcg                                                                                                                   <  1:2461253/151‑1 (MQ=255)
                                      cTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTc                                                                                                             <  2:1155304/151‑1 (MQ=255)
                                       tGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTcc                                                                                                            >  2:5454739/1‑151 (MQ=255)
                                        gAAGATTGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGGGCGCCTCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCGATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCg                                                                                                           <  2:4102303/151‑1 (MQ=37)
                                        gAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCg                                                                                                           >  2:1290421/1‑151 (MQ=255)
                                         aaGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGc                                                                                                          >  1:5789535/1‑151 (MQ=255)
                                              ggTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATgc                                                                                                     <  1:2965547/151‑1 (MQ=255)
                                              ggTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATgc                                                                                                     >  1:5691057/1‑151 (MQ=255)
                                               gTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATgcg                                                                                                    >  2:707480/1‑151 (MQ=255)
                                               gTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATgcg                                                                                                    >  1:678666/1‑151 (MQ=255)
                                                 ttGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGcgcc                                                                                                  <  1:3618265/151‑1 (MQ=255)
                                                   gACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGcgccgc                                                                                                <  2:465593/151‑1 (MQ=255)
                                                   gACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGcgccgc                                                                                                >  2:562517/1‑151 (MQ=255)
                                                     cGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCt                                                                                              >  1:1518906/1‑151 (MQ=255)
                                                         atatGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGttt                                                                                          <  1:2075939/151‑1 (MQ=255)
                                                               gtTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATg                                                                                    <  1:1604216/151‑1 (MQ=255)
                                                                 tGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGATTCCGCCATGGGCCGGCTGTTTTTCATGCt                                                                                  >  1:6223777/1‑151 (MQ=255)
                                                                 tGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCt                                                                                  <  1:4265142/151‑1 (MQ=255)
                                                                  gCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGCCCGCCATGCGCCGCCTGTTTTTCATGCTg                                                                                 >  1:5424371/1‑151 (MQ=255)
                                                                    gTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTg                                                                                             >  1:3384231/1‑137 (MQ=255)
                                                                     tCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTc                                                                              >  2:1946095/1‑151 (MQ=255)
                                                                       tGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCct                                                                            >  2:1850992/1‑151 (MQ=255)
                                                                       tGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCct                                                                            <  2:6057750/151‑1 (MQ=255)
                                                                        gggAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCCTGCTGTTCctg                                                                           >  1:5229100/1‑151 (MQ=255)
                                                                          gagaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCctgct                                                                         <  1:4609915/151‑1 (MQ=255)
                                                                           agaTCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTcctcctt                                                                        >  1:6461503/1‑150 (MQ=255)
                                                                              tCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTCTCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCctgttgctg                                                                     >  2:4868808/1‑151 (MQ=255)
                                                                              tCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCctgctgctg                                                                     <  1:2180330/151‑1 (MQ=255)
                                                                              tCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCctgctgctg                                                                     >  2:6150536/1‑151 (MQ=255)
                                                                                    gccgccCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGc                                                               >  1:1374181/1‑151 (MQ=255)
                                                                                     ccgcccgcGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGcc                                                              <  1:4628758/151‑1 (MQ=255)
                                                                                       gcccgcGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCt                                                            >  2:537433/1‑151 (MQ=255)
                                                                                        cccgcGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCCGCCCtc                                                           >  1:277570/1‑150 (MQ=255)
                                                                                            cgcgGCGCTTCGCGGGTAATCCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCtt                                                       <  2:4755067/151‑1 (MQ=255)
                                                                                             gcggcgCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTc                                                      <  1:2228663/151‑1 (MQ=255)
                                                                                             gcggcgCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTc                                                      >  1:2423449/1‑151 (MQ=255)
                                                                                             gcggcgCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTc                                                      <  1:5365254/151‑1 (MQ=255)
                                                                                             gcggagCTTCGCGGGTAAGCCCGATCCTTCGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGACCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTc                                                      <  1:2388600/151‑1 (MQ=255)
                                                                                              cggcgCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTcg                                                     >  2:2351338/1‑151 (MQ=255)
                                                                                                 cgcTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTcgccg                                                  <  2:2394639/151‑1 (MQ=255)
                                                                                                 cgcTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTcgccc                                                  >  2:2815341/1‑150 (MQ=255)
                                                                                                  gcTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTcgccgc                                                 >  1:4199900/1‑151 (MQ=255)
                                                                                                   cTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGcgcc                                                                                                  <  2:4447728/101‑1 (MQ=255)
                                                                                                      cgcgGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGc                                             >  1:6475874/1‑151 (MQ=255)
                                                                                                         gggTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTg                                          >  1:3801426/1‑151 (MQ=255)
                                                                                                           gTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGcc                                        >  1:4975575/1‑150 (MQ=255)
                                                                                                           gTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGcc                                        >  1:2609062/1‑150 (MQ=255)
                                                                                                           gTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGcc                                        >  2:1648931/1‑150 (MQ=255)
                                                                                                           gTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCCGCCTTCGCCGCAGGCCTGCt                                        >  2:6495067/1‑151 (MQ=255)
                                                                                                              aaCCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGa                                     >  2:3778707/1‑151 (MQ=255)
                                                                                                               aCCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGAc                                    <  1:3173965/151‑1 (MQ=255)
                                                                                                                 ccGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACaa                                  <  2:5237709/151‑1 (MQ=255)
                                                                                                                  cGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAAc                                 <  1:190181/151‑1 (MQ=255)
                                                                                                                  cGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAAc                                 >  1:4497143/1‑151 (MQ=255)
                                                                                                                  cGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAAc                                 >  1:4755093/1‑151 (MQ=255)
                                                                                                                   gCTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAAcc                                <  1:2870348/151‑1 (MQ=255)
                                                                                                                    cTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCg                               <  2:1885761/151‑1 (MQ=255)
                                                                                                                    cTCCTACGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCg                               <  2:2564068/151‑1 (MQ=255)
                                                                                                                         aCGTTTGTTTCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCa                          <  1:3761239/151‑1 (MQ=255)
                                                                                                                           gtttggttCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCCCCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTACTCGACAACCGCCCCAgc                        <  2:2162064/151‑1 (MQ=255)
                                                                                                                             ttgtttCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAgcgc                      <  2:3412282/151‑1 (MQ=255)
                                                                                                                              tgtttCGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGcc                     >  1:973941/1‑151 (MQ=255)
                                                                                                                                   cGGGCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCt                >  1:3984269/1‑151 (MQ=255)
                                                                                                                                     ggCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTg              >  2:5490216/1‑151 (MQ=255)
                                                                                                                                     ggCCAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTg              >  2:1791268/1‑151 (MQ=255)
                                                                                                                                       ccAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGgc            >  1:915027/1‑151 (MQ=255)
                                                                                                                                        cAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCGTTCGCCGCAGGCCTGCCCGACAACCGCCCCAGCGCCACCCTTTgcg           >  2:4044781/1‑151 (MQ=255)
                                                                                                                                        cAATTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGgcg           <  1:5454739/151‑1 (MQ=255)
                                                                                                                                         aaTTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGgcgc          <  1:258104/151‑1 (MQ=255)
                                                                                                                                         aaTTATTCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGgcgc          >  2:6265810/1‑151 (MQ=255)
                                                                                                                                         aaTTATGCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGgcgc          <  2:1478090/151‑1 (MQ=255)
                                                                                                                                           ttattCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGcgccg        >  2:3214804/1‑151 (MQ=255)
                                                                                                                                            tattCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGcgccgc       >  1:6081986/1‑151 (MQ=255)
                                                                                                                                             attCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGcgccgcc      >  2:1070996/1‑150 (MQ=255)
                                                                                                                                             attCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGCGCCGCt      <  2:5968253/151‑1 (MQ=255)
                                                                                                                                              ttCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGCGCCGCtt     <  2:2722799/151‑1 (MQ=255)
                                                                                                                                              ttCCTGCGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGCGCCGCtt     >  1:4112203/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TCTGAGTCGGCGGGTGGTCGCCAGGACAGGTGTAGCAACTGAAGAGGGTTTGACGTGATATGTGTTGCGTCTGGGAGATCGAGCGCCGCCCGCGCGGCGCTTCGCGGGTAAACCCGCTCCTACGTTTGTTTCGGGCCAATTATTCCTGTGCATCCGTTATCATGCCGGGCACGTTCCACCTCGCGAGTCCGCCATGCGCCGCCTGTTTTTCATGCTGTTCCTGCTGCTGGCCAGCCCTGCCTTCGCCGCAGGCCTGCTCGACAACCGCCCCAGCGCCACCCTTGGCGCCGCTTCGC  >  CP009974/1449483‑1449778

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑