| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 1,533,045 | G→A | S453S (TCG→TCA) | RPPX_06795 → | GntR family transcriptional regulator |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 1,533,045 | 0 | G | A | 99.7% | 1204.9 / NA | 321 | S453S (TCG→TCA) | RPPX_06795 | GntR family transcriptional regulator |
| Reads supporting (aligned to +/- strand): ref base G (0/0); major base A (150/169); minor base C (1/0); total (151/170) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.72e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 321 total aligned reads displayed.
CACGTGACAACGGCGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCGCCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCATCGAAGCTGTCGAAGT > CP009974/1532897‑1533192 | cACGTGACAACGGCGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGCATTCAcc > 2:5355119/1‑151 (MQ=255) aCGTGACAACGGCGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCg > 1:4344596/1‑151 (MQ=255) gTGACAACGGCGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGa > 1:4876110/1‑151 (MQ=255) gTGACAACGGCGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGa > 1:226839/1‑151 (MQ=255) gACAACGGCGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCCAGCTGGCAAGCCTGCTGGATTCACCGGAAc > 2:2249141/1‑151 (MQ=255) gACAACGGCGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAAc < 2:5664950/151‑1 (MQ=255) aCAACGGCGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAAcc < 2:5790518/151‑1 (MQ=255) cAACGGCGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACcg < 2:5888331/151‑1 (MQ=255) aaCGGCGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACcgc > 1:5366650/1‑151 (MQ=255) ggCGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGgt > 1:6131219/1‑151 (MQ=255) gCGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGgtt < 2:1602509/151‑1 (MQ=255) cGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGgttg < 1:1751568/151‑1 (MQ=255) gTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGgttgt > 1:3600111/1‑151 (MQ=255) tAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGgttgtt < 2:4297394/151‑1 (MQ=255) aaaCAGGGGTCAGCGGCAGCCAGTTCCTGCCACAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGgttgtt < 2:4778184/150‑1 (MQ=255) aaCAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTc > 1:6015038/1‑151 (MQ=255) gTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACt < 1:4999849/151‑1 (MQ=255) gTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACt < 2:2947868/151‑1 (MQ=255) tGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTg < 2:2070654/151‑1 (MQ=255) ggTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGa < 1:5731129/151‑1 (MQ=255) gTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGaa > 1:5047077/1‑151 (MQ=255) tCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGaaa < 1:1284007/151‑1 (MQ=255) cGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGa > 1:1923248/1‑151 (MQ=255) ggCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGAt < 1:3413699/151‑1 (MQ=255) ggCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGAt > 1:4642338/1‑151 (MQ=255) cAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGc > 1:303065/1‑151 (MQ=255) ccAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAg > 1:4804986/1‑151 (MQ=255) aGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGAt < 2:327527/151‑1 (MQ=255) aGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGAt > 1:4522117/1‑151 (MQ=255) gTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATa > 2:4189462/1‑151 (MQ=255) ttCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATAc < 2:3154851/151‑1 (MQ=255) ttCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATAc < 2:1885016/151‑1 (MQ=255) ttCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATAc < 1:2450850/151‑1 (MQ=255) ccTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATAcgc > 1:6401666/1‑151 (MQ=255) ccTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATAcgc < 1:5951834/151‑1 (MQ=255) tGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCgg > 1:3528381/1‑151 (MQ=255) tGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCgg > 2:1772376/1‑151 (MQ=255) gCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGt < 1:5905568/151‑1 (MQ=255) aGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGtgct > 1:32081/1‑151 (MQ=255) gAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCTCTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGtgctg < 2:6239120/151‑1 (MQ=255) aaCGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGtgctgc < 1:986274/151‑1 (MQ=255) aCGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGcc < 1:3682026/151‑1 (MQ=255) aCGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGcc > 1:4078157/1‑151 (MQ=255) cGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGCTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGccc < 2:6009630/151‑1 (MQ=255) aGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCAtc > 2:2726183/1‑150 (MQ=255) aGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATa < 1:1451948/151‑1 (MQ=255) gccacgccacCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATaa > 1:5244351/1‑151 (MQ=255) acgccacCAGCGGTGTGCGCATCGCTCTGATGGCACCCCGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATaaaaa < 2:5509541/151‑1 (MQ=255) gccacCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATaaaaaaa > 2:750648/1‑151 (MQ=255) ccaGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCa < 1:3321282/151‑1 (MQ=255) aGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAgg > 1:6515685/1‑151 (MQ=255) gCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAggg < 1:1128240/151‑1 (MQ=255) cGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGc < 1:2160752/151‑1 (MQ=255) ggTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCa > 1:3967926/1‑151 (MQ=255) gtgtGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCaa < 2:5536908/151‑1 (MQ=255) gtgCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACt > 2:2487983/1‑151 (MQ=255) gtgCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACt < 1:5502766/151‑1 (MQ=255) gcgcATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGc < 2:2401972/151‑1 (MQ=255) cgcATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGcc < 2:4251696/151‑1 (MQ=255) cgcATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGcc < 1:1583724/151‑1 (MQ=255) gcATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGccc > 1:2396316/1‑151 (MQ=255) cATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCt < 1:3521754/151‑1 (MQ=255) cGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTggg < 2:3950915/151‑1 (MQ=255) tGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCg < 2:3600111/151‑1 (MQ=255) cACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGc > 2:6471678/1‑151 (MQ=255) cccAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTg > 1:2570153/1‑151 (MQ=255) aGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAAc > 1:2965472/1‑151 (MQ=255) gccgccAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACg < 2:1511176/151‑1 (MQ=255) ccgccAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGc < 1:1519148/151‑1 (MQ=255) cgccAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGcc > 1:6465808/1‑151 (MQ=255) cgccAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGcc < 1:2300629/151‑1 (MQ=255) gccAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGccc < 1:2706598/151‑1 (MQ=255) gccAGGCACTGCGCTTTGCCCTGACCAAGCGGGCAAGCCTGCTGGACGCACCGCAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGAGGTGCTGCCCATAAAAAAACCCAGGGCACCTGCCCTGGGTTTCGTCTTCCTGAACGccc > 2:6219154/1‑151 (MQ=255) aGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAgg < 1:2515096/114‑1 (MQ=255) ggCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTAcc < 2:5400476/151‑1 (MQ=255) tGGGCTTTGCCCTGACCAAGCTGGCAAGCCGGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCttt < 2:1330424/151‑1 (MQ=255) gggCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGACTCACCGGAACCGCGGCTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTg < 2:4083690/151‑1 (MQ=255) ttGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAGCCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAg < 2:4991932/151‑1 (MQ=255) tGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGa < 2:2581307/151‑1 (MQ=255) cTGACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACgg < 1:5585574/151‑1 (MQ=255) gACCAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGaa < 2:6326128/151‑1 (MQ=255) cAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAatat < 2:3059704/151‑1 (MQ=255) cAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAatat < 1:655674/151‑1 (MQ=255) cAAGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAatat > 1:4176821/1‑151 (MQ=255) aaGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATc > 1:5864595/1‑151 (MQ=255) aGCTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCg < 1:925478/151‑1 (MQ=255) cTGGCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTc > 2:201581/1‑151 (MQ=255) ggCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCAt > 2:2786538/1‑151 (MQ=255) gCAAGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCATc < 1:3754452/151‑1 (MQ=255) aaGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCATCGa > 1:6343132/1‑151 (MQ=255) aaGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCATCGa > 1:19855/1‑151 (MQ=255) aaGCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCATCGa > 2:4383415/1‑151 (MQ=255) gCCTGCTGGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCATCGAAg < 1:4588104/151‑1 (MQ=255) ctgctgGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCATCGAAGcc > 2:4449286/1‑150 (MQ=255) ctgctgGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCATCGAAGCt < 2:5244351/151‑1 (MQ=255) gctgGATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAGACCCAGGGCAACTGCCCTGGGTGTCGTCTTGCTGAACGCCCTACCGCTTTGAGCAGAACGGAATATCGTCATCGAAGCTGt < 2:5159253/151‑1 (MQ=255) ggATTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCATCGAAGCTGGCGa > 2:4428466/1‑151 (MQ=255) ggAGTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCATCGAAGCTGTCGa < 2:4863920/151‑1 (MQ=255) aTTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCATCGAAGCTGTCGAAg > 1:1661490/1‑151 (MQ=255) aTTCACCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCATCGAAGCTGTCGAAg > 2:874540/1‑151 (MQ=255) | CACGTGACAACGGCGTAACAGTGGTCAGCGGCAGCCAGTTCCTGCCAGAACGCAGCCACGCCACCAGCGGTGTGCGCATCGCTCTGATGGCACCCAGCCGCCAGGCACTGGGCTTTGCCCTGACCAAGCTGGCAAGCCTGCTGGATTCGCCGGAACCGCGGTTGTTCTACTGAAAGCGATGCCAGATACGCGGTGCTGCCCATAAAAAAACCCAGGGCAACTGCCCTGGGTTTCGTCTTGCTGAACGCCCTACCGCTTTGATCAGAACGGAATATCGTCATCGAAGCTGTCGAAGT > CP009974/1532897‑1533192 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |