BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	CP009974	1,554,990	A→G	D139D (GAT→GAC)	tuf ←	elongation factor Tu

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	CP009974	1,554,990	0	A	G	100.0%	609.4 / NA	216	D139D (GAT→GAC)	tuf	elongation factor Tu
Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (110/106); total (110/106)

Only 100 of 216 total aligned reads displayed.

CATACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGATCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGTTC  >  CP009974/1554876‑1555137

 aTACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGc                                                                                                                >  1:2560864/1‑151 (MQ=14)

   aCGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCt                                                                                                              >  1:702127/1‑151 (MQ=17)

    cGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTa                                                                                                             >  2:2162120/1‑151 (MQ=14)

    cGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTa                                                                                                             >  2:1145008/1‑151 (MQ=17)

       gCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCt                                                                                                          >  1:4691220/1‑151 (MQ=17)

        cGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTg                                                                                                         >  2:4259470/1‑151 (MQ=17)

        cGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTg                                                                                                         <  2:5166519/151‑1 (MQ=17)

         ggAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGa                                                                                                        >  2:5841335/1‑151 (MQ=17)

           aaCCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACg                                                                                                      <  2:1737996/151‑1 (MQ=17)

            aCCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACgg                                                                                                     >  1:6504947/1‑151 (MQ=17)

             ccGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACggg                                                                                                    >  1:6011396/1‑151 (MQ=17)

             ccGATGATGATCGGAGTGTCGGCGCCTGGGAAGTCGGAGGTGGACAGCAGGCCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGGCGTCTACCAGGTCATCCTTGTTCAGGAAGACCACGAATTACGGAACGCCTACCTGACggg                                                                                                    >  2:2712234/1‑151 (MQ=11)

              cGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGa                                                                                                   >  1:1121743/1‑151 (MQ=17)

               gatgatgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAc                                                                                                  >  2:5288643/1‑151 (MQ=17)

               gatgatgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAc                                                                                                  >  2:1695563/1‑151 (MQ=14)

                    tgatCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGAcagcag                                                                                             <  2:1358975/151‑1 (MQ=17)

                       tCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAt                                                                                          <  2:793036/151‑1 (MQ=17)

                        cGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtg                                                                                         >  2:6233581/1‑151 (MQ=17)

                        cGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtg                                                                                         >  1:4253142/1‑151 (MQ=17)

                        cGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtg                                                                                         <  2:4517269/151‑1 (MQ=17)

                        cGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtg                                                                                         <  1:6073380/151‑1 (MQ=17)

                         ggAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtgt                                                                                        >  1:1940661/1‑151 (MQ=17)

                         ggAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtgt                                                                                        >  2:2983451/1‑151 (MQ=17)

                          gAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtgtg                                                                                       >  2:846147/1‑151 (MQ=17)

                          gAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGAtgtg                                                                                       >  2:6444057/1‑151 (MQ=17)

                           aGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGc                                                                                      <  1:2101196/151‑1 (MQ=17)

                            gtgtCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCt                                                                                     <  1:5037870/151‑1 (MQ=17)

                             tgtCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTc                                                                                    <  1:6477511/151‑1 (MQ=17)

                                 gtcgCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACgg                                                                                <  2:2584174/151‑1 (MQ=17)

                                    gCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTCCTCACGGGta                                                                             >  2:6206576/1‑150 (MQ=17)

                                      cTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtg                                                                           <  1:3924234/151‑1 (MQ=17)

                                       tGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtgt                                                                          <  1:6234264/151‑1 (MQ=18)

                                       tGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtgt                                                                          >  1:4643364/1‑151 (MQ=18)

                                        gggAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtgtg                                                                         >  1:3028480/1‑151 (MQ=18)

                                        gggAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTtgtg                                                                         >  2:4766487/1‑151 (MQ=18)

                                         ggAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTgg                                                                        >  2:3358853/1‑151 (MQ=21)

                                          gAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGc                                                                       >  1:1463665/1‑151 (MQ=25)

                                             gTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATc                                                                    <  1:548859/151‑1 (MQ=25)

                                             gTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATc                                                                    <  2:1776476/151‑1 (MQ=25)

                                                gTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTGTGTGGCATCggc                                                                 >  2:6473629/1‑150 (MQ=21)

                                                   ggTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCa                                                              >  1:4742508/1‑151 (MQ=21)

                                                     tGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATc                                                            >  2:1294501/1‑151 (MQ=21)

                                                       gACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcgg                                                          <  2:2037395/151‑1 (MQ=25)

                                                          agcagGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcggcgg                                                       <  2:6011396/151‑1 (MQ=25)

                                                          agcagGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATcggcgg                                                       <  2:2940658/151‑1 (MQ=25)

                                                           gcagGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCggcggc                                                      >  1:3621155/1‑151 (MQ=25)

                                                            cagGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGcc                                                     <  2:260879/151‑1 (MQ=25)

                                                              ggTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCggcggc                                                      <  2:2429574/148‑1 (MQ=25)

                                                               gTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCCGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCTCGGTTTTGTGTCATCGTACCATCGGCGGCCggg                                                  >  1:1491889/1‑149 (MQ=11)

                                                               gTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAg                                                  <  2:3207195/151‑1 (MQ=25)

                                                                tCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGc                                                 <  2:343964/151‑1 (MQ=25)

                                                                   cgAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCaaa                                              >  2:4347478/1‑151 (MQ=18)

                                                                    gAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGGGTCGGAGCATCGGCGGCACAGCAAAc                                             >  2:4576226/1‑151 (MQ=11)

                                                                    gAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAAc                                             >  1:3842061/1‑151 (MQ=25)

                                                                    gAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAAc                                             >  1:1789005/1‑151 (MQ=25)

                                                                    gAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCCAGCaacc                                             >  2:4785362/1‑149 (MQ=19)

                                                                       cTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAg                                          <  2:159867/151‑1 (MQ=25)

                                                                       cTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAg                                          >  1:3914543/1‑151 (MQ=25)

                                                                         tCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGa                                        <  2:3676055/151‑1 (MQ=25)

                                                                          ccATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGAt                                       <  2:6356197/151‑1 (MQ=25)

                                                                          ccATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGAt                                       <  1:5728438/151‑1 (MQ=25)

                                                                           cATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATc                                      >  1:5845989/1‑151 (MQ=25)

                                                                            aTCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcg                                     >  2:1816513/1‑151 (MQ=25)

                                                                            aTCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcg                                     <  1:2383657/151‑1 (MQ=25)

                                                                            aTCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcg                                     <  1:4078772/151‑1 (MQ=25)

                                                                             tctcGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcgc                                    <  1:2218539/151‑1 (MQ=37)

                                                                              ctcGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcgcg                                   >  1:1974023/1‑151 (MQ=255)

                                                                              ctcGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATcgcg                                   >  2:563056/1‑151 (MQ=255)

                                                                                cgctcAGTTCCAGCAGCTCAGCGTCGTCTACCAGGGCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGcc                                 <  2:5140280/147‑1 (MQ=255)

                                                                                cGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGcc                                 <  2:5797036/151‑1 (MQ=255)

                                                                                cGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGcc                                 >  1:969097/1‑151 (MQ=255)

                                                                                cGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGcc                                 <  1:300920/151‑1 (MQ=255)

                                                                                 gACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCg                                >  1:4931781/1‑151 (MQ=255)

                                                                                   ccAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTc                              <  2:2273943/151‑1 (MQ=255)

                                                                                    cAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTcc                             <  1:2207521/151‑1 (MQ=255)

                                                                                    cAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTcc                             >  1:743070/1‑151 (MQ=255)

                                                                                    cAGTTCCAGCAGCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTcc                             >  2:5462488/1‑151 (MQ=255)

                                                                                        tCCGGCAGCTGAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTCCCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCt                         <  2:4240406/151‑1 (MQ=255)

                                                                                          cagcagCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTgg                       <  2:5180791/151‑1 (MQ=255)

                                                                                          cagcagCTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTgg                       >  1:3737760/1‑151 (MQ=255)

                                                                                           agcagcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACATGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTggg                      <  1:3513877/151‑1 (MQ=255)

                                                                                              agcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGCAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGCTGTGCTCACGGGTTTGTGGCATCGGACCATCGGCCGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgcag                   >  2:5131027/1‑151 (MQ=255)

                                                                                              agcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgcag                   >  1:3275317/1‑151 (MQ=255)

                                                                                              agcTCAGCGTCGTCTACCAGGTCAGCCTTGGTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCCGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgcat                   >  2:1859152/1‑150 (MQ=255)

                                                                                               gcTCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGgcagc                  >  1:3032169/1‑151 (MQ=255)

                                                                                                 tCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCAc                >  1:5097603/1‑151 (MQ=255)

                                                                                                 tCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCAc                <  1:1145007/151‑1 (MQ=255)

                                                                                                 tCAGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACAACGATGTACGGAACGACTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCAc                <  1:2480990/151‑1 (MQ=255)

                                                                                                   aGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCg              <  1:3181674/151‑1 (MQ=255)

                                                                                                   aGCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCg              >  1:4411546/1‑151 (MQ=255)

                                                                                                    gCGTCGTCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCgg             <  1:6160071/151‑1 (MQ=255)

                                                                                                     cgtcgtCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGt            <  2:3948945/151‑1 (MQ=255)

                                                                                                     cgtcgtCTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGt            <  1:1198664/151‑1 (MQ=255)

                                                                                                      gtcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGCCAGCAGGATGTGCTCACGGGTTCGTGGCATCGGACCATCGGCGGCCCAGCACCCCAGGATCCCCCCGTCCCTCCCGCCAGCACCggcc           >  2:3400105/1‑149 (MQ=11)

                                                                                                      gtcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTg           >  1:6406539/1‑151 (MQ=255)

                                                                                                       tcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGa          >  1:157279/1‑151 (MQ=255)

                                                                                                       tcgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGa          >  2:6524909/1‑151 (MQ=255)

                                                                                                        cgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGAt         >  1:1174035/1‑151 (MQ=255)

                                                                                                        cgtcTACCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGAt         <  1:5274569/151‑1 (MQ=255)

                                                                                                             aCCAGGTCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGt    >  1:588967/1‑151 (MQ=255)

CATACGAGCGGAACCGATGATGATCGGAGTGTCGTCGCCTGGGAAGTCGTAGGTGGACAGCAGGTCGCGAACTTCCATCTCGACCAGTTCCAGCAGCTCAGCGTCGTCTACCAGATCAGCCTTGTTCAGGAAGACCACGATGTACGGAACGCCTACCTGACGGGACAGCAGGATGTGCTCACGGGTTTGTGGCATCGGACCATCGGCGGCCGAGCAAACCAGGATCGCGCCGTCCATCTGGGCAGCACCGGTGATCATGTTC  >  CP009974/1554876‑1555137

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 12 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 41 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`