Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 1,561,107 T→C D622G (GAC→GGC)  RPPX_06985 ← DNA‑directed RNA polymerase subunit beta'

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP0099741,561,1070TC100.0% 1088.7 / NA 300D622G (GAC→GGC) RPPX_06985DNA‑directed RNA polymerase subunit beta'
Reads supporting (aligned to +/- strand):  ref base T (0/0);  new base C (151/149);  total (151/149)

Only 100 of 300 total aligned reads displayed.

GCCGGAGGCGTACTGGCTCTCGATTTCCTTCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGTCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGAACAGCAGCGCACGGCCGACGG  >  CP009974/1560959‑1561254
                                                                                                                                                    |                                                                                                                                                   
gCCGGAGGCGTACTGGCTCTCGATTTCCTTCACTTCGTGGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCg                                                                                                                                                   <  2:3845792/151‑1 (MQ=255)
 ccGGAGGCGTACTGGCTCTCGATTTCCTTCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCgg                                                                                                                                                  <  2:2744787/151‑1 (MQ=255)
 ccGGAGGCGTACTGGCTCTCGATTTCCTTCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCgg                                                                                                                                                  <  2:2389957/151‑1 (MQ=255)
        cGTACTGGCTCTCGATTTCCTTCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGAt                                                                                                                                           >  1:2367883/1‑151 (MQ=255)
           aCTGGCTCTCGATTTCCTTCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAAc                                                                                                                                        >  1:4906776/1‑151 (MQ=255)
           aCTGGCTCTCGATTTCCTTCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAAc                                                                                                                                        <  1:6389924/151‑1 (MQ=255)
             tGGCTCTCGATTTCCTTCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACgg                                                                                                                                      >  1:5848903/1‑151 (MQ=255)
              ggCTCTCGATTTCCTTCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGt                                                                                                                                     >  1:2225142/1‑151 (MQ=255)
                ctctCGATTTCCTTCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGtct                                                                                                                                   >  1:1282333/1‑151 (MQ=255)
                   tcGATTTCCTTCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTCCATCAGCTGGCCGGCGAAGATAACGGTCTCtt                                                                                                                                >  2:4653514/1‑151 (MQ=255)
                      aTTTCCTTCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCa                                                                                                                             <  1:3283622/151‑1 (MQ=255)
                       tttCCTTCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAg                                                                                                                            <  2:3643185/151‑1 (MQ=255)
                             tCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGaccaac                                                                                                                      <  2:2515425/151‑1 (MQ=255)
                               aCTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGaccaacca                                                                                                                    >  1:801723/1‑151 (MQ=255)
                                  tcgtcgGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCAcgc                                                                                                                 <  1:1381639/151‑1 (MQ=255)
                                   cgtcgGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCAcgcg                                                                                                                >  2:5356661/1‑151 (MQ=255)
                                    gtcgGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCgg                                                                                                               <  1:320672/151‑1 (MQ=255)
                                      cgGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTa                                                                                                             <  1:4417073/151‑1 (MQ=255)
                                      cgGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTa                                                                                                             >  2:3010534/1‑151 (MQ=255)
                                      cgGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTa                                                                                                             <  2:2822001/151‑1 (MQ=255)
                                       ggTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAg                                                                                                            >  1:3102404/1‑151 (MQ=255)
                                        gTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGTGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCgg                                                                                                               >  2:5894385/1‑147 (MQ=255)
                                        gTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGGTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTTGc                                                                                                           >  2:6327090/1‑151 (MQ=255)
                                        gTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGc                                                                                                           >  2:2289595/1‑151 (MQ=255)
                                          aGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCAc                                                                                                         >  2:2662614/1‑151 (MQ=255)
                                          aGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCAc                                                                                                         >  1:609655/1‑151 (MQ=255)
                                           gCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACt                                                                                                        <  1:3917035/151‑1 (MQ=255)
                                            cGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTg                                                                                                       >  2:4959302/1‑151 (MQ=255)
                                              ttACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGt                                                                                                     >  1:409354/1‑151 (MQ=255)
                                               tACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGtt                                                                                                    >  1:4742256/1‑151 (MQ=255)
                                                  cGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGAt                                                                                                 >  1:1224016/1‑151 (MQ=255)
                                                   gatgatGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATc                                                                                                >  2:770239/1‑151 (MQ=255)
                                                      gatgCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAACCGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGc                                                                                             <  1:2019930/151‑1 (MQ=255)
                                                         gCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTCGTTGCTAAGCGTg                                                                                          >  2:2043127/1‑151 (MQ=255)
                                                          cGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTgg                                                                                         <  1:580027/151‑1 (MQ=255)
                                                            ggCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGgag                                                                                       >  2:195323/1‑151 (MQ=255)
                                                            ggCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGgag                                                                                       >  1:2568064/1‑151 (MQ=255)
                                                               tttCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATc                                                                                    <  1:1830605/151‑1 (MQ=255)
                                                               tttCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATc                                                                                    <  1:2899076/151‑1 (MQ=255)
                                                                ttCTGGTCAGGGATAACTAAGTCGTAAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCg                                                                                   <  2:4436675/151‑1 (MQ=255)
                                                                      gccGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCtttt                                                                             <  1:42625/150‑1 (MQ=255)
                                                                       ccGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGCGATCGCCttttt                                                                            >  1:6279925/1‑151 (MQ=255)
                                                                        cGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTttc                                                                           <  1:2200136/151‑1 (MQ=255)
                                                                        cGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTttc                                                                           <  2:6486340/151‑1 (MQ=255)
                                                                        cGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTttc                                                                           >  2:393461/1‑151 (MQ=255)
                                                                         gggATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTttct                                                                          <  2:2487319/151‑1 (MQ=255)
                                                                          ggATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTttctt                                                                         <  1:4081530/151‑1 (MQ=255)
                                                                           gATAACGAAGTCGTTAACACCGATGGAAACGCCGGCAATGGTAGAGTAAGCGAAACCGGAGGACATCAGCTGGCCGGCGCAGATACCGGACTCTCTCAGACCAACCACGCGGTAGCACGGGTTGATCAGCTCGGACATCGCCGTTttcttc                                                                        >  2:5117204/1‑151 (MQ=255)
                                                                           gATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTttcttc                                                                        <  2:4462834/151‑1 (MQ=255)
                                                                            aTAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTttcttct                                                                       >  2:2098448/1‑150 (MQ=255)
                                                                            aTAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCa                                                                       >  2:5846951/1‑151 (MQ=255)
                                                                              aaCGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAACCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATc                                                                     <  2:5713391/151‑1 (MQ=255)
                                                                               aCGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCttttt                                                                            <  1:1609608/143‑1 (MQ=255)
                                                                                 gAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGc                                                                  >  1:304152/1‑151 (MQ=255)
                                                                                  aaGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCAt                                                                      <  1:899557/146‑1 (MQ=255)
                                                                                  aaGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCt                                                                 <  2:891555/151‑1 (MQ=255)
                                                                                  aaGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCt                                                                 <  2:427649/151‑1 (MQ=255)
                                                                                   aGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTg                                                                >  2:4075212/1‑151 (MQ=255)
                                                                                        ttAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCAGTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGa                                                           >  2:6315617/1‑151 (MQ=255)
                                                                                        ttAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGa                                                           >  1:4383410/1‑151 (MQ=255)
                                                                                          aaCACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGAcc                                                         >  1:5668060/1‑151 (MQ=255)
                                                                                             acCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACg                                                      <  2:5106944/151‑1 (MQ=255)
                                                                                              ccGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGt                                                     <  1:5169628/151‑1 (MQ=255)
                                                                                               cGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTc                                                    >  2:5414058/1‑151 (MQ=255)
                                                                                               cGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTc                                                    >  2:4560643/1‑151 (MQ=255)
                                                                                                  tGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATa                                                 >  1:4602397/1‑151 (MQ=255)
                                                                                                    gAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACTACGTCATACg                                               >  2:2212401/1‑151 (MQ=255)
                                                                                                    gAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACg                                               >  1:1892032/1‑151 (MQ=255)
                                                                                                      aaCGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGc                                             >  1:617465/1‑151 (MQ=255)
                                                                                                       aCGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCa                                            <  2:2934469/151‑1 (MQ=255)
                                                                                                         gCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCtt                                                                               >  1:5920862/1‑114 (MQ=255)
                                                                                                         gCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGa                                          >  2:1601399/1‑151 (MQ=255)
                                                                                                           cGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGAcc                                        <  1:2102221/151‑1 (MQ=255)
                                                                                                           cGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGAcc                                        <  2:260434/151‑1 (MQ=255)
                                                                                                           cGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGCCAGAcc                                        >  2:3592425/1‑151 (MQ=255)
                                                                                                             gAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTg                                      >  1:984058/1‑151 (MQ=255)
                                                                                                              aaaTGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGc                                     <  1:110622/151‑1 (MQ=255)
                                                                                                                aTGGTCGTGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCg                                   <  2:4023471/151‑1 (MQ=255)
                                                                                                                 tGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCgg                                  >  1:3530370/1‑151 (MQ=255)
                                                                                                                  ggTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGc                                 >  2:1650442/1‑151 (MQ=255)
                                                                                                                   gTCGAGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGca                                >  1:661112/1‑151 (MQ=255)
                                                                                                                       aGTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAAc                            >  1:2856465/1‑151 (MQ=255)
                                                                                                                        gTAAGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAAcc                           <  2:6148023/151‑1 (MQ=255)
                                                                                                                           aGCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTgg                        >  1:2939576/1‑151 (MQ=255)
                                                                                                                            gCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGa                       <  1:3367462/151‑1 (MQ=255)
                                                                                                                            gCGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGa                       <  1:2289595/151‑1 (MQ=255)
                                                                                                                             cGAAACCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGaa                      <  1:5356661/151‑1 (MQ=255)
                                                                                                                                aaCCGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGAAcag                   >  2:184580/1‑151 (MQ=255)
                                                                                                                                  ccGGTGTACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGAAcagca                 >  2:6471502/1‑151 (MQ=255)
                                                                                                                                     gtgtACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGAACAGCAgcg              <  1:1767393/151‑1 (MQ=255)
                                                                                                                                        tACATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGAACAGCAGCGCAc           >  1:3804044/1‑151 (MQ=255)
                                                                                                                                         aCATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGAACAGCAGCGCACg          <  2:1313184/151‑1 (MQ=255)
                                                                                                                                          cATCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGAAcagca                 >  2:3237251/1‑143 (MQ=255)
                                                                                                                                           aTCAGCTGGCCGGCGCAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCCGACCTGCCGGCCCAACCTGGAACAGCAGCGCACGGc        >  2:5201395/1‑151 (MQ=255)
                                                                                                                                           aTCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGAACAGCAGCGCACGGc        >  1:4470965/1‑151 (MQ=255)
                                                                                                                                            tCAGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGAACAGCAGCGCACGGcc       <  1:3640270/151‑1 (MQ=255)
                                                                                                                                              aGCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGAACAGCAGCGCACGGCCGa     >  1:5573253/1‑151 (MQ=255)
                                                                                                                                               gCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGCCCTGCCGGCACAACCTGGAACCGCAGCGCACGGCCgcc    >  2:480069/1‑149 (MQ=255)
                                                                                                                                               gCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGAACAGCAGCGCACGGCCGAc    <  1:2780462/151‑1 (MQ=255)
                                                                                                                                               gCTGGCCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGAACAGCAGCGCACGGCCGAc    >  2:3962966/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GCCGGAGGCGTACTGGCTCTCGATTTCCTTCACTTCGTCGGTAGCGTTACCGATGATGCGGGCTTTCTCGTCCGGGATAACGAAGTCGTTAACACCGATGGAAACGCCGGAAATGGTCGAGTAAGCGAAACCGGTGTACATCAGCTGGTCGGCGAAGATAACGGTCTCTTTCAGACCAACCACGCGGTAGCACTGGTTGATCAGCTTGGAGATCGCCTTTTTCTTCATCGGCTGGTTGACCACGTCATACGGCAGACCTGCCGGCACAACCTGGAACAGCAGCGCACGGCCGACGG  >  CP009974/1560959‑1561254

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑