| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 1,915,165 | T→C | intergenic (+54/+14) | RPPX_08535 → / ← RPPX_08540 | ferrioxamine B receptor/5S ribosomal RNA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 1,915,165 | 0 | T | C | 99.6% | 643.4 / ‑3.2 | 222 | intergenic (+54/+14) | RPPX_08535/RPPX_08540 | ferrioxamine B receptor/5S ribosomal RNA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); major base C (92/129); minor base . (0/1); total (92/130) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.87e-01 | |||||||||||
Only 100 of 226 total aligned reads displayed.
CCAATGAAAGCTACATTACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGT > CP009974/1915017‑1915303 | ccAATGAAAGCTACATTACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGctt > 2:5822861/1‑151 (MQ=255) cAATGAAATCTACATTACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGcttt < 2:5518771/151‑1 (MQ=255) aaTGAAAGCTACATTACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTg < 2:1082926/151‑1 (MQ=255) aaaaaGCTCCATTACCTCATGTGCCAGCCTCAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTACCCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTggg < 2:879130/149‑3 (MQ=255) gCTACATTACCTCATGTGCCAGCCTGAACTACTGTTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTgggtttga < 1:5320385/151‑8 (MQ=255) gCTACATTACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTgggtttga < 1:2066725/151‑8 (MQ=255) cTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGa > 1:3877566/1‑151 (MQ=255) tCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGAt > 1:764299/1‑151 (MQ=255) tgtgCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGAc > 2:3783672/1‑151 (MQ=255) tgtgCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGAc < 1:6461780/151‑1 (MQ=255) tgtgCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGAc > 1:3728235/1‑151 (MQ=255) gtgCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGAcc < 2:199157/151‑1 (MQ=255) gtgCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGAcc > 1:2322556/1‑151 (MQ=255) ccAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTAc < 1:1055153/151‑1 (MQ=255) ccAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTAc > 1:3267636/1‑151 (MQ=255) cAGCGTGACCTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAACCCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTAct < 2:4248729/151‑1 (MQ=255) cAGCCTGAACTACGGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTAct < 2:6366618/151‑1 (MQ=255) gCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTActct > 2:5244365/1‑151 (MQ=255) gCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTActct > 2:5700128/1‑151 (MQ=255) gCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTActct > 1:4343739/1‑151 (MQ=255) actactGCTAGATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATg < 2:2863024/151‑1 (MQ=255) actactGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATg > 1:2305638/1‑151 (MQ=39) actactGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATg < 2:2310255/151‑1 (MQ=255) ctactGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATgg > 2:1784643/1‑151 (MQ=255) tactGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATggg > 1:5175107/1‑151 (MQ=39) tactGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATggg < 1:2500266/151‑1 (MQ=255) actGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATgggg > 2:1917891/1‑151 (MQ=39) actGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATgggg < 1:5883831/151‑1 (MQ=255) cATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAAcccc < 1:2190191/151‑1 (MQ=38) cATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAAcccc < 2:342012/151‑1 (MQ=38) cATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAAcccc > 1:5971423/1‑151 (MQ=38) aTGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCca > 2:3478016/1‑151 (MQ=38) aTGGGTGAAGAGCACAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCca < 2:3977469/151‑1 (MQ=38) tGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCcac > 1:1613302/1‑151 (MQ=38) gggTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCcaca > 1:2230223/1‑151 (MQ=38) tGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAGACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTa > 2:6114591/1‑151 (MQ=37) gcgcAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCg < 2:1857896/151‑1 (MQ=37) gcgcAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCg < 1:4281448/151‑1 (MQ=37) ctatgtgtgAGCGCCACGGTCAGCTACCAGTTCTACCCGGTATTGAAACCCGTGAAAGACAACGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCgg < 2:841416/146‑1 (MQ=21) cgcAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCgg > 2:6236564/1‑151 (MQ=37) gcAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGc > 1:3692711/1‑151 (MQ=37) cAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCg < 2:4703516/151‑1 (MQ=37) cAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCg < 2:4967376/151‑1 (MQ=37) aTGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGAt > 1:2029274/1‑151 (MQ=37) aTGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGAt < 1:4583526/151‑1 (MQ=37) gTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGc > 1:841416/1‑151 (MQ=25) aGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATc < 2:6430318/151‑1 (MQ=25) cgcTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGt > 2:3033395/1‑151 (MQ=25) cgcTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGt < 1:5665958/151‑1 (MQ=25) gcTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGtt < 2:5293389/151‑1 (MQ=25) cTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGttt < 1:1798325/151‑1 (MQ=25) aCGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGc > 2:5317814/1‑142 (MQ=25) ggggaGCGATCAGTGCTGACCGATGTTGAAAGCCGTGAAAGACAGAGCCCCGGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCact < 2:4321465/147‑1 (MQ=18) ggTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCact > 2:148785/1‑151 (MQ=25) tgaggtATCAGTTCTACCCGATATTGCAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCactac < 2:392979/146‑1 (MQ=18) aGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCActgctg < 2:415695/151‑1 (MQ=21) cTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAg < 1:2575458/151‑1 (MQ=21) tCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTc > 1:4213362/1‑151 (MQ=21) cAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCg > 1:6111055/1‑151 (MQ=21) cAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCg > 1:3629810/1‑151 (MQ=21) cAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCg > 2:350250/1‑151 (MQ=21) ttCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATAGTTTCACTGCTGAGTTCggaa > 2:4217545/1‑149 (MQ=18) tCTAACCGATATTGAAACCCGTGAAAGACAACGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCgggat < 2:4636445/151‑1 (MQ=18) tCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCgggat < 2:2322024/151‑1 (MQ=18) tCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCgggat > 2:2046247/1‑151 (MQ=18) cTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGTCGATGCATCGTTTCACTGCTGTGTTCgggatg > 1:2960551/1‑151 (MQ=18) cTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCgggttg > 1:2412721/1‑151 (MQ=18) cTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCgggatg < 1:1178540/151‑1 (MQ=18) tAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCgggatgg > 2:6077551/1‑151 (MQ=18) tatTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAgg < 1:864815/151‑1 (MQ=18) tGAATCCCGTGAAAGACAACGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAggtgg < 2:3281664/151‑1 (MQ=17) gAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAggtggt < 1:799489/151‑1 (MQ=17) gAAACCCGGGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAggtggt < 2:5070526/151‑1 (MQ=17) aataccGTGAGAGACAAAGCCCCTGTGTGCAGGGCAGACGGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGtt < 2:6007521/147‑1 (MQ=14) aaaCCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGtt < 2:504917/151‑1 (MQ=17) aaCCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTc > 1:2421529/1‑151 (MQ=17) aCCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTcc < 1:3449864/151‑1 (MQ=17) aCCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTcc < 1:6264891/151‑1 (MQ=17) ccGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCaa < 1:147716/151‑1 (MQ=17) gTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATg < 2:788174/151‑1 (MQ=14) tGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACCCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGCTGGGATCAGGTGGTTCCAATGc > 1:3345240/1‑151 (MQ=14) gAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGct > 1:4978716/1‑151 (MQ=14) aGACAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTa < 1:1863991/151‑1 (MQ=14) aGACAAAGCCCCTGTCAGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTa < 2:1831899/151‑1 (MQ=14) aCAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATg < 1:573572/151‑1 (MQ=14) cAAAGCCCCTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATgg < 2:5335596/151‑1 (MQ=14) aaGCCCCTGTCTGCATCGCAGACAGGGG‑CTTGGGGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGgtc < 1:6435073/151‑1 (MQ=14) gCCCCTGTCTGCATCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTCCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTCTGgtcgt > 2:4015583/1‑151 (MQ=14) cccTTTCTGCATCGCAGACAGGGGCTTTG‑GGTTTTAATCTTGACGATGACCTACTCTCACATGGGTAAACCCCACACTACCATCGGCGATGCATCGGTTCACTGCTGAGTTCGGGATGTGATCAGGTGGTTCCAATGCTCTATGATCGTCa > 2:512003/1‑151 (MQ=11) cccTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCa > 1:5122179/1‑151 (MQ=14) cccTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCa > 2:216255/1‑151 (MQ=14) cccTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCa > 1:6020359/1‑151 (MQ=14) ccTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCaa > 2:5158717/1‑151 (MQ=14) cTGTCTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAg > 2:3667526/1‑151 (MQ=14) cTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAAt < 2:6475439/151‑1 (MQ=11) cTGCATCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAAt < 2:72938/151‑1 (MQ=11) aTCGCAGACAGGGGCTTTGGG‑TTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTc < 2:2327629/149‑1 (MQ=11) tCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGCCCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGt < 2:438245/151‑1 (MQ=11) tCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGt > 1:570204/1‑151 (MQ=11) tCGCAGACAGGGGCTTTG‑GGTTTGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTGCTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGt < 2:2707024/151‑1 (MQ=11) | CCAATGAAAGCTACATTACCTCATGTGCCAGCCTGAACTACTGCTACATGGGTGAAGAGCGCAATGTAAGCGCTACGGTCAGCTATCAGTTCTAACCGATATTGAAACCCGTGAAAGACAAAGCCCCTGTCTGCATCGCAGACAGGGGTTTTGCGAAATGAATCTTGACGATGACCTACTCTCACATGGGGAAACCCCACACTACCATCGGCGATGCATCGTTTCACTACTGAGTTCGGGATGGGATCAGGTGGTTCCAATGCTCTATGGTCGTCAAGAAATTCTGT > CP009974/1915017‑1915303 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |