Predicted mutation
evidence seq id position mutation annotation gene description
RA CP009974 382,193 T→C intergenic (+329/+200) RPPX_01535 → / ← RPPX_01540 guanine permease/5‑hydroxyisourate hydrolase

Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*CP009974382,1930TC98.8% 868.9 / ‑1.3 323intergenic (+329/+200)RPPX_01535/RPPX_01540guanine permease/5‑hydroxyisourate hydrolase
Reads supporting (aligned to +/- strand):  ref base T (2/2);  new base C (158/161);  total (160/163)
Fisher's exact test for biased strand distribution p-value = 1.00e+00
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.97e-01

Only 100 of 330 total aligned reads displayed.

TGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACTGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAACAGCAGACGAAAAAAAGCC  >  CP009974/382045‑382340
                                                                                                                                                    |                                                                                                                                                   
tGCGTCAAATGGCCCGAAACAGACGTAGGAGCCGCTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGGCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCAc                                                                                                                                                   <  2:3308490/151‑1 (MQ=21)
 gcttCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCAcc                                                                                                                                                  <  2:4773777/148‑1 (MQ=21)
         tGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTcgc                                                                                                                                          <  1:1014408/151‑1 (MQ=21)
              cGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTa                                                                                                                                     <  2:1638422/151‑1 (MQ=18)
                  ccAGACGTAGGAGCCCCTATCTTGCTTCACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGCAGCGGGTTTACCCGCGAAGAGGCCGGCCCGGCTGGCCAATCTCCACCCGCCGTTCCCCGGTGCTGCCGCCACCGGCTTCGCGGGGAAAcc                                                                                                                                 >  2:5216372/2‑151 (MQ=17)
                   cAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAAccc                                                                                                                                <  1:6461135/151‑1 (MQ=18)
                   cAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAAccc                                                                                                                                <  1:5203257/151‑1 (MQ=18)
                   cAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAAccc                                                                                                                                <  2:4903401/151‑1 (MQ=255)
                      aCGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCt                                                                                                                             >  1:4963069/1‑151 (MQ=255)
                        gTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTcc                                                                                                                           <  1:4740429/151‑1 (MQ=17)
                          aGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTa                                                                                                                         >  1:74610/1‑151 (MQ=17)
                            gggCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTaca                                                                                                                       <  2:1128221/149‑1 (MQ=14)
                            gAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTaca                                                                                                                       >  1:4133845/1‑151 (MQ=255)
                            gAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTaca                                                                                                                       <  1:6060884/151‑1 (MQ=17)
                               ccACTATCGTGCGGAGCAGTGGAAATGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCGCTGGGGGCCAATCTCCACCGGCCGTTCACCGTTGCTGCCGCCACCGTATTCGAGGGTAAACCCGCTCCTACACCt                                                                                                                    <  2:5516199/151‑1 (MQ=14)
                                cACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTg                                                                                                                   >  2:1775137/1‑151 (MQ=255)
                                    aTCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCg                                                                                                               >  1:4986600/1‑151 (MQ=17)
                                      cTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCggt                                                                                                             <  1:6263680/151‑1 (MQ=17)
                                       ttGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCggtg                                                                                                            <  1:2365151/151‑1 (MQ=17)
                                         gCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCggtggt                                                                                                          >  1:4545828/1‑151 (MQ=17)
                                         gCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCggtggt                                                                                                          <  1:3788574/151‑1 (MQ=255)
                                          cTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGATGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGgcggtg                                                                                                         >  1:5281360/1‑151 (MQ=17)
                                            tAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGa                                                                                                       >  2:2553598/1‑151 (MQ=17)
                                                aTTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGacaca                                                                                                   >  2:4542344/1‑151 (MQ=17)
                                                  tGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGGAAACCCGCTCCTACACCTGATCGGTGGTGGAcacaca                                                                                                 >  2:907107/1‑151 (MQ=17)
                                                    gAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATg                                                                                               <  2:3609806/151‑1 (MQ=17)
                                                    gAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATg                                                                                               >  2:3070636/1‑151 (MQ=255)
                                                     gaaGGCCTGCGCGGTCCCGCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTGCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGTGGGTAAGCCCGCTCCTACACCTGATCGGTGGTGGACACACATGt                                                                                              <  2:4598810/150‑1 (MQ=17)
                                                       aGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGGTGCTGCCGCCACCGTAGTCGCGGGTAAACCCGCCCCTACACCCGATCGGGGGTGGACACACATGTCg                                                                                            >  2:5685531/1‑151 (MQ=17)
                                                         gCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCggg                                                                                          <  1:6522169/151‑1 (MQ=17)
                                                         gCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCggg                                                                                          <  1:1741393/151‑1 (MQ=17)
                                                            tGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTCCACCTGATCGGTGGTGGACACACATGTCgggggg                                                                                       >  2:3934737/1‑150 (MQ=17)
                                                            tGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGt                                                                                       <  2:4117124/151‑1 (MQ=255)
                                                            tGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGCGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGt                                                                                       >  1:2903105/1‑151 (MQ=17)
                                                            ggcgcGGTCCCCCCGTAGGAGCGGGTTGACCCGGGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGt                                                                                       <  1:55635/150‑1 (MQ=17)
                                                             gcgcGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGtt                                                                                      <  1:3485507/151‑1 (MQ=255)
                                                              cgcgGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTg                                                                                     <  1:5727795/151‑1 (MQ=255)
                                                               gcgGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTgg                                                                                    >  1:2694802/1‑151 (MQ=17)
                                                               gcgGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTgg                                                                                    <  2:1985819/151‑1 (MQ=17)
                                                                  gTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGca                                                                                 <  1:858515/151‑1 (MQ=17)
                                                                   tCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACTTGCTCGGTGGTGGACACACATGTCGGGGGTTGGGcac                                                                                >  1:6211707/1‑151 (MQ=17)
                                                                   cccccccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGcac                                                                                <  1:1655789/150‑1 (MQ=255)
                                                                     ccccaGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAg                                                                              <  1:2515768/151‑1 (MQ=17)
                                                                      ccccGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGCTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGCCGGGGGCTGGGCACAgg                                                                             >  1:3266422/1‑151 (MQ=17)
                                                                         cGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCCGTGGTGGACACACATGTCGGGGGATGGGCACAGGCcg                                                                          >  2:5996062/1‑151 (MQ=14)
                                                                          gTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCcgt                                                                         <  1:3986270/151‑1 (MQ=17)
                                                                             ggAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCcgtcgt                                                                      >  1:3166063/1‑151 (MQ=14)
                                                                              gAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCgtg                                                                     <  1:2075838/151‑1 (MQ=255)
                                                                              gAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCgtg                                                                     >  1:6406750/1‑151 (MQ=17)
                                                                               ggCGGGTTTACCCGCGAAGGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCgtgt                                                                    <  2:4279963/150‑1 (MQ=14)
                                                                               aGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCACCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAAACCGCTCCAACACCTGATCGGTGGTGGACACACACGTCGGGGGTAGGGCACAGGCcgccgtta                                                                    >  2:4366171/1‑149 (MQ=14)
                                                                                gCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTa                                                                   <  1:2596871/151‑1 (MQ=17)
                                                                                gCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTa                                                                   <  2:123659/151‑1 (MQ=255)
                                                                                    gTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAg                                                               <  2:2239478/151‑1 (MQ=255)
                                                                                    gTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAg                                                               >  1:503742/1‑151 (MQ=17)
                                                                                        aCCCGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCggg                                                           <  2:2794014/151‑1 (MQ=255)
                                                                                         cccGCGAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCgggg                                                          >  1:2250651/1‑150 (MQ=17)
                                                                                           cgcgAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCCGATCGGTGGGGGACACACATGCCCGGGGTTGGGCACACGCCGCCGCGTAGGAGCGGGttt                                                        >  2:3826148/1‑151 (MQ=14)
                                                                                             cgAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTAc                                                      >  1:4224422/1‑151 (MQ=17)
                                                                                             cgAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTAc                                                      <  2:6294471/151‑1 (MQ=255)
                                                                                              gAAGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTAcc                                                     >  2:2747679/1‑151 (MQ=17)
                                                                                               aaGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTAccc                                                    <  1:2802810/151‑1 (MQ=255)
                                                                                               aaGAGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTAccc                                                    <  1:1434965/151‑1 (MQ=17)
                                                                                                 gagCCCGGCCCGGCTGGCCAATCTGCCCCCGCCGTGCGCCGTTGCTGCCGCCACCGTATTCGCGGGTAAGCCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCcgc                                                  <  2:1021643/151‑1 (MQ=14)
                                                                                                     ccggccCTGCTGGCCAATCTCCGCCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAag                                              <  2:4193064/151‑1 (MQ=14)
                                                                                                       gggtgggctgGTCAATGGCCAGCCGCCGTTCGCCGCTGCTGCCGGCACCGTATTCGCGGGTAAACCCGCTCCCACACCTGAGCGGTGGTGGACACACGTGTCGGGGGTTGGGCGCAGGCCGTCGTGTAGGAGCGGGTTTCCCCGCGAagag                                            <  2:2488168/145‑1 (MQ=14)
                                                                                                       ggccCTGCTGGCCAATTTCCACCCGCCGTTCACTGTTGCCGCCGCTACCGTATTTGCGGGTAAACCCGCTCCTacgc                                                                                                                      >  2:1548388/1‑75 (MQ=255)
                                                                                                       ggccCTGCTGGCCAATTTCCACCCGCCGTTCACTGTTGCCGCCGCTACCGTATTCGCGGGt                                                                                                                                      <  1:6318032/61‑1 (MQ=35)
                                                                                                        gccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAgg                                           <  1:3300088/151‑1 (MQ=255)
                                                                                                        gccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAgg                                           <  1:3561344/151‑1 (MQ=255)
                                                                                                         cccTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGc                                          >  1:1537385/1‑151 (MQ=14)
                                                                                                           ctgctgGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCg                                        <  1:434928/151‑1 (MQ=255)
                                                                                                              ctgGCCAATCTCCCCCCGCCGTTCACCGTTGCGGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGca                                     <  2:109066/151‑1 (MQ=255)
                                                                                                               tgGCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcac                                    >  1:2103502/1‑151 (MQ=255)
                                                                                                                ggCCCATCTCCACCCGCCGTGCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAGCCCGCTCCTACACCTGAGCGGTGGTGGACACACATGTCGGGGGTGGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcaca                                   <  1:1302581/151‑1 (MQ=17)
                                                                                                                ggCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcaca                                   <  1:1560707/151‑1 (MQ=255)
                                                                                                                ggCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGcaca                                   <  1:391239/151‑1 (MQ=255)
                                                                                                                 gCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAg                                  >  1:53397/1‑151 (MQ=255)
                                                                                                                 gCCAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAg                                  >  1:365294/1‑151 (MQ=17)
                                                                                                                   cAATCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGc                                >  2:5059447/1‑151 (MQ=255)
                                                                                                                    aaTCTCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGCGTAGGAGCGGGTTTACCCGCGAAGCGGCCGGCCCAGGCa                               >  2:5421981/1‑151 (MQ=17)
                                                                                                                     atctCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCaa                              <  2:2118323/148‑1 (MQ=255)
                                                                                                                     atctCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCaa                              >  1:3598759/4‑151 (MQ=255)
                                                                                                                       ctCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGCTTACCCGCGAAGCGGCCGGCACAGGCAATg                            >  2:1435527/2‑151 (MQ=17)
                                                                                                                        tCCACCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGAGCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGc                           <  2:5928099/151‑1 (MQ=255)
                                                                                                                         ccgcccGCCGTTCAGCGTTGCTGCCGCCAGCGGATTCGCGGGTAAGCCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACCGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCa                          <  2:5661819/148‑1 (MQ=17)
                                                                                                                           aCCCGCCGTTCACCGTTGCTGCCGCCACCGTATTCGAGGGTAAACCCGCTCCTACACCTGCGCGGGGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCCGGATCACCCGCGAAGAGCCCAGCACAGGCAGAGCaaa                        >  2:3778146/1‑151 (MQ=14)
                                                                                                                             ccgccgTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCaaaaa                      >  2:644755/1‑151 (MQ=255)
                                                                                                                              cgccgTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCaaaaaa                     <  1:41982/151‑1 (MQ=255)
                                                                                                                                 cgTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAAcag                  >  2:2309683/1‑151 (MQ=255)
                                                                                                                                  gTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCCCAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAAAGTAAAAAAcagc                 >  1:1968981/1‑151 (MQ=17)
                                                                                                                                  gTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAAcagc                 >  2:1942290/1‑151 (MQ=255)
                                                                                                                                  gTTCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAAcagc                 >  1:1467397/1‑151 (MQ=255)
                                                                                                                                    tCACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAAcagcag               <  1:5906395/151‑1 (MQ=255)
                                                                                                                                    ccACCGTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAAcagcag               <  1:5762390/150‑1 (MQ=255)
                                                                                                                                       ccgTTGCTGCCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGAGCGGGGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAACAGCAGACg            <  2:699723/149‑1 (MQ=255)
                                                                                                                                           tgctgcCGCCACCGTATTGGCGGGTAAACCCGCTCCTACGCCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAACAGCAGACGaaaa        <  1:2275908/151‑1 (MQ=255)
                                                                                                                                           tgctgcCGCCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAACAGCAGACGaaaa        <  1:310338/151‑1 (MQ=255)
                                                                                                                                                ccgcCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAACAGCAGACGAAAAAAAGc   >  2:3461862/1‑151 (MQ=255)
                                                                                                                                                 cgcCACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAACAGCAGACGAAAAAAAGcc  >  1:1074188/1‑151 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
TGCGTCAAATGGCCCGAAACAGACGTAGGAGCCACTATCTTGCTTAACATTGGAAAGGCCTGCGCGGTCCCCCCGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACTGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACCTGATCGGTGGTGGACACACATGTCGGGGGTTGGGCACAGGCCGTCGTGTAGGAGCGGGTTTACCCGCGAAGAGGCCGGCACAGGCAATGCAAAAAACAGCAGACGAAAAAAAGCC  >  CP009974/382045‑382340

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑