| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | CP009974 | 1,984,399 | T→C | intergenic (+229/+55) | RPPX_08865 → / ← RPPX_08870 | hypothetical protein/SulP family inorganic anion transporter |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | CP009974 | 1,984,399 | 0 | T | C | 99.7% | 1027.7 / ‑4.9 | 304 | intergenic (+229/+55) | RPPX_08865/RPPX_08870 | hypothetical protein/SulP family inorganic anion transporter |
| Reads supporting (aligned to +/- strand): ref base T (1/0); new base C (167/136); total (168/136) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 7.54e-01 | |||||||||||
Only 100 of 305 total aligned reads displayed.
CTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCAGA > CP009974/1984251‑1984546 | ctgctgGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAAtctc < 1:1346513/151‑1 (MQ=255) gctgGCCAATCTCCGCCCGCCGGTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCa < 2:5802896/151‑1 (MQ=255) gctgGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTccc > 1:1535224/1‑150 (MQ=255) gctgGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCa < 1:5644272/151‑1 (MQ=255) gggCCAACCTCCCCCCGCACTTCACGGTGGCCGCCGGTACCGTCGTCGCGGGTAAACCCGCGCCGACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCAcc < 2:4260464/150‑1 (MQ=14) aaTCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGAGGGGCTACCCGCGAACGGGCCGGCCCTGCCGGCCCATCTCCACccgccc > 2:6274625/1‑150 (MQ=14) ttgtcCGCCCGTCGTTCTCGGTCGCCGCCGCGGCCGGTTGCGCGGGTAACCCCGCGCCGACCCACGCGCATCGGTGGTTCGCCCCAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCGGCTGGCCAATCTCCACCCGCCGt < 2:4817768/148‑1 (MQ=9) tcCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGTCCAATCTCCACCCGCCGTTCa > 1:2508858/1‑151 (MQ=255) cgccgTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCCCCGTTCACCGTTg > 1:4514049/1‑151 (MQ=255) tCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCa > 2:129508/1‑151 (MQ=255) ccGTTGCCGCCTCTATCGTATTGGCTGGTAAACCCGTTACTACCCACGCGCATCGGTGGTTCGGCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGGCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTa < 1:4922137/151‑1 (MQ=14) ttGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTGCACCGTTGCCGCCCCTACCg > 2:4428655/1‑151 (MQ=255) ttGCCGCCGCTACCGTACTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCg < 1:1862178/151‑1 (MQ=255) ccgccgCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCCTAt > 2:4632477/1‑151 (MQ=255) cgccgcTACCGTATTGGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTAtt < 1:1380645/151‑1 (MQ=255) cgccgcTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTAtt > 1:357636/1‑151 (MQ=255) gccggTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTc < 2:1800134/151‑1 (MQ=255) ccgcTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTcg < 1:6335018/151‑1 (MQ=255) cgcTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTcgc > 1:794650/1‑151 (MQ=255) cgcTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGCTCACCGTTGCCGCCACTACCGTATTcgc > 2:5739092/1‑151 (MQ=255) cTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCgg > 2:2656101/1‑151 (MQ=255) aCCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCGGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTACACCGTCACCGCCACTACCGTCGTCGCgggg > 2:5115303/1‑150 (MQ=17) cGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTaa > 1:2798430/1‑151 (MQ=255) gaTTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAAc < 1:2010970/150‑1 (MQ=255) aTTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAAcc > 2:210969/1‑151 (MQ=255) nggTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTcc > 1:4216373/2‑151 (MQ=255) gagTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTcc < 1:1472647/149‑1 (MQ=255) ggTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCCGGTAAACCCACTCCt > 1:1716944/1‑151 (MQ=255) gTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTa > 1:2254970/1‑151 (MQ=255) gTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTa < 1:4041435/151‑1 (MQ=255) aaCCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGc > 1:6311484/1‑151 (MQ=255) cccGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGccc > 1:4719509/1‑151 (MQ=255) ccGCTCCGACACACATGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGcccc < 1:2861751/151‑1 (MQ=255) ccGCTACTACACACAGGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGcccc < 1:2419261/151‑1 (MQ=255) cGCCCCTACACAGACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCa < 2:536838/151‑1 (MQ=255) cTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAAc > 2:246971/1‑151 (MQ=255) tCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAAcc > 2:3443920/1‑151 (MQ=255) tACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAAccccc > 1:5527371/1‑151 (MQ=255) cacacacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGc > 1:3730596/1‑151 (MQ=255) acacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGt > 2:4900194/1‑151 (MQ=255) acacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGt > 1:2983045/1‑151 (MQ=255) acacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGt > 1:267853/1‑151 (MQ=255) cacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCCACCCCCGCTgca > 2:169640/1‑149 (MQ=255) cacGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTa > 2:106302/1‑151 (MQ=255) cGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGt > 1:1286098/1‑151 (MQ=255) aTCGGTGGTTCGCCGCAGCCCGTCGTAGGAGCGGGCTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCg < 2:3914738/151‑1 (MQ=255) ggtggtTCGCCACAGCCCGTCGTAGGAGCGGCTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAACCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCaa < 1:681876/151‑1 (MQ=255) ttgtccgccgcAGCCCGTCGTAGGGGCGGGTTCACCGGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAAcc < 2:520660/146‑1 (MQ=17) tggtTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAAcc < 1:1005803/151‑1 (MQ=255) ttCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTACTCGCGGGCAAACCCACTCCTACGCCCCAACCCCCGCTCTAGTCCGCAACcccc > 2:2058844/1‑151 (MQ=255) tCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGccc < 1:628716/151‑1 (MQ=255) cggcgcaGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGcccc < 1:2607006/146‑1 (MQ=255) gCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTCGTCCGCAACccccccc > 2:709379/1‑150 (MQ=255) ccACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTc > 1:887265/1‑151 (MQ=255) cgcaGGCCGTCGTAGGAGCGGGTTGACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCg < 2:5433975/149‑1 (MQ=255) cacaGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTCGTCCGCCACCGccccccc > 2:4066722/1‑148 (MQ=255) gcaGGCCGTCGTAGGAGCGGGTTCACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACACCCCAACCCCCGCGGTACTCCGCAACCCCCCCTCgg > 1:2134494/2‑150 (MQ=14) acaGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGa > 1:5887454/1‑151 (MQ=255) aGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCCACCGCCCCTCGCTc > 2:1912990/1‑151 (MQ=255) aGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATc > 2:5952773/1‑151 (MQ=255) aGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATc > 2:3260434/1‑151 (MQ=255) gCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATcc < 1:1182200/151‑1 (MQ=255) gCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGGAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATcc > 1:4289064/1‑151 (MQ=255) gccGTCGTAGGGGCGGGTTCCCCCGCGAAAGGGCCGGCCCTGCTGCCCACTCTCCACCCGCCGTTCACCGTTGGCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCg < 2:163255/150‑1 (MQ=18) ccGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGa < 1:1681240/151‑1 (MQ=255) ccGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGa > 1:5293509/1‑151 (MQ=255) ccGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGa > 1:3407695/1‑151 (MQ=255) gtcgtAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGCTCCGACg > 2:5574642/1‑151 (MQ=255) cgtAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCCACGCt > 2:4520913/1‑151 (MQ=255) cgggggAGCGGGTTCGCCCGCGCAAGGGCCGGCCCTGCTGGCCAGCCGCCACCCGCCGTTCCCCGTGGCCGCCACTACCGTATTCGCGGGTAAGCCCACTCCGACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCt < 2:2942921/147‑1 (MQ=18) aGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCa > 1:3191956/1‑151 (MQ=255) gAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAgg > 2:2878471/1‑151 (MQ=255) gggTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGcgcc < 1:4458582/151‑1 (MQ=255) gggTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGcgcc < 1:5405689/151‑1 (MQ=255) gggTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGcgcc > 1:4125223/1‑151 (MQ=255) gggTTGACCGGCGAAGGGGCCGGCCCTGCTGGCGAATCTCCGCCCGCCGTTCACCGTTGCCGCCACGACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCGGCAACCGCCCCTCGATCCGACGCTTCAGGcgcc < 2:3722004/151‑1 (MQ=21) gTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTCCAGGcgccgc > 2:303464/1‑151 (MQ=255) ttACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCgctg > 2:829103/1‑151 (MQ=255) tACCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCgctgc < 2:2429511/151‑1 (MQ=255) caCCCGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCgctgc < 1:3543729/150‑1 (MQ=255) ccGCGAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGctct < 1:3303728/151‑1 (MQ=255) cgcgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTa > 1:4431839/1‑151 (MQ=255) cgcgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTa > 1:5950812/1‑151 (MQ=255) cgcgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTa > 2:3103597/1‑151 (MQ=255) gcgAAAGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTAt < 2:1535224/151‑1 (MQ=255) aaaGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGccc < 1:2096875/87‑1 (MQ=25) aGGGCCGGCCCTGCTGGCCAATCTCCACCCGCCGTCCACCGTGGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCa < 2:6455156/151‑1 (MQ=255) ggccggccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAAc < 1:6166596/151‑1 (MQ=255) ggccggccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAAc > 2:2610512/1‑151 (MQ=255) cggccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGt < 1:6078629/151‑1 (MQ=255) ggccCTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTg < 1:510442/151‑1 (MQ=255) cccTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGAc < 2:109703/151‑1 (MQ=255) ccTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGAcc < 2:3650683/151‑1 (MQ=255) tgctgGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCACCCGTGACCCa > 2:4208339/1‑151 (MQ=255) ctgGCCAATCTCCCCCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCAtt < 2:1254936/151‑1 (MQ=255) ctgGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCAtt < 1:3138908/151‑1 (MQ=255) ctgGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGACCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCAtt > 2:5279435/1‑151 (MQ=255) ctgGCCAATCCCCCCCCGCGGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGGTCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCAtt < 2:1477666/151‑1 (MQ=255) tgGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTg > 1:2730853/1‑151 (MQ=255) ccAATCTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGCCCCATTGGCa > 1:193952/1‑151 (MQ=255) | CTGCTGGCCAATCTCCACCCGCCGTTCACCGTTGCCGCCGCTACCGTATTCGCGGGTAAACCCGCTCCTACACACACGCATCGGTGGTTCGCCACAGCCCGTCGTAGGAGCGGGTTTACCCGCGAAAGGGCCGGCCCTGCTGGCCAATTTCCACCCGCCGTTCACCGTTGCCGCCACTACCGTATTCGCGGGTAAACCCACTCCTACGCCCCAACCCCCGCTGTAGTCCGCAACCGCCCCTCGATCCGACGCTTCAGGCGCCGCTGCTCTATCAGCAACCGTGACCCATTGGCAGA > CP009974/1984251‑1984546 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 12 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |