BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	U00096	781369 =	95 (0.540)	43 (0.250) +G	13/290	14.1	37.5%	noncoding (1/76 nt)	lysZ	tRNA‑Lys
*	?	U00096	= 2521129	49 (0.280)	43 (0.250) +G	13/290	14.1	37.5%	intergenic (+3/‑44)	valX/valY	tRNA‑Val/tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 101 total aligned reads displayed.

CAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAA  >  U00096/781221‑781517

caGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATg                                                                                                                                                      <  2:449749/149‑1 (MQ=255)

caGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTAAAAGATTGTCCACGAGTAGAAATCGTTCAGGTAACAACCGTATg                                                                                                                                                      >  2:449856/1‑149 (MQ=21)

 aGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGAGTGGCCCCGAGTAAAAATCTATCAGGTAACACCCGTATgg                                                                                                                                                     >  1:449791/1‑149 (MQ=255)

  gTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATggg                                                                                                                                                    >  2:449782/1‑149 (MQ=255)

   ttttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCGCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGt                                                                                                                                                   <  1:449749/149‑1 (MQ=255)

   ttttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGt                                                                                                                                                   >  1:449777/1‑149 (MQ=255)

    tttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                                                                                                                                                  >  1:449812/1‑149 (MQ=255)

       aaCATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGtt                                                                                                                                               <  2:449751/149‑1 (MQ=255)

        aCATCAAACTCCGATGGTAAGCGTGCAGGATAACGTTGCGCCAGCAACGGCCCGGACGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTa                                                                                                                                              <  2:449753/149‑1 (MQ=37)

        aCATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAAACTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTa                                                                                                                                              <  1:449753/149‑1 (MQ=255)

        aCATCAAACTCAGATGTTAAGCGTGAAGGATAACGATGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTa                                                                                                                                              <  1:449751/149‑1 (MQ=255)

            cAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                                                                          <  2:449755/149‑1 (MQ=255)

            cAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                                                                          <  1:449755/149‑1 (MQ=255)

             aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                                         <  2:449757/149‑1 (MQ=255)

             aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGGAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCtaa                                                                                                                                         >  1:449827/1‑147 (MQ=255)

               aCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                                                                                                                                       <  1:449757/149‑1 (MQ=255)

                cTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACTCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGtt                                                                                                                                      <  2:449759/149‑1 (MQ=255)

                cTCACATCTTAAGCGTGAAGGATAACGTAGATCCCGCTACGGACCGGACTGCGAGGGAATCGAGTCAGCCTGCACGACCCACCAATCTTAACGATTGGCCCCGAGGAACAATCAACCACTTAACAACCTTAAGGGTCGTTAGCTCAGta                                                                                                                                      <  2:449774/149‑2 (MQ=255)

                 tCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATATTAAAGAGGGGCCACGAGTAAAAATCTTTCGGGTACCTCGCGTATGGGTCGTGAGGTCAGTTg                                                                                                                                     >  2:449806/1‑149 (MQ=18)

                   aGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCATTCTTTAAGATTGGCCCCGAGTAAATATCTTTCAGTTACCACCCGTTTGGGTCGTTAGCTCAGTTGGt                                                                                                                                   <  2:449760/149‑1 (MQ=21)

                        ttAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGc                                                                                                                              <  2:449761/149‑1 (MQ=255)

                          aaGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAgcagtac                                                                                                                                  >  1:1511288/1‑137 (MQ=255)

                            gCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGtt                                                                                                                          <  2:449763/149‑1 (MQ=255)

                               tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGAc                                                                                                                       >  2:449896/1‑149 (MQ=255)

                                gAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAGGTGTGGCCGCGAGTAGAAAGCTTTCAGGTAACACCCGTATGGGGCGGTAGGTCTGGGGGTAGAGCAGTTGACt                                                                                                                      >  2:449853/1‑149 (MQ=21)

                                gAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTGAGCTGAGGTGGTAGGGCAGTTGACt                                                                                                                      >  2:449786/1‑149 (MQ=255)

                                    gATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTa                                                                                                                  <  1:449763/149‑1 (MQ=255)

                                    gATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTa                                                                                                                  >  2:449781/1‑149 (MQ=255)

                                    gATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTa                                                                                                                  <  2:449766/149‑1 (MQ=255)

                                    gATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTa                                                                                                                  <  2:449765/149‑1 (MQ=255)

                                    gATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATATTAAAGATTGGACCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTa                                                                                                                  >  1:449790/1‑149 (MQ=255)

                                     aTAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTg                                                                                                                         >  1:449794/1‑141 (MQ=255)

                                     aTAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTaa                                                                                                                 >  1:1225306/1‑149 (MQ=255)

                                         cGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCaa                                                                                                             <  2:449767/149‑1 (MQ=255)

                                           ttGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAtt                                                                                                           <  2:449768/149‑1 (MQ=255)

                                           ttGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAtt                                                                                                           <  2:449769/149‑1 (MQ=255)

                                                   gCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAg                                                                                                   <  2:449770/149‑1 (MQ=255)

                                                      aCGGCCCGCAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATTTGTCGTTAGCTAAGTTTGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGtt                                                                                                <  1:449771/149‑1 (MQ=38)

                                                       cGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATATTAAAGATTGGCCCCGAGTAAAAATGTTTCAGGTCACAACCGAATGGGTCGTTGGCTCAGTTGTGATAGCGGTTGACTTTTAATCAATTTGTCGCAGGTTc                                                                                               >  2:449847/1‑149 (MQ=37)

                                                             gTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                         <  1:449772/149‑1 (MQ=255)

                                                              tAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTCGTCGCTGGTTAGAATCCt                                                                                        >  1:449816/1‑149 (MQ=255)

                                                                       cgaagcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGCCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAccc                                                                               >  1:449823/1‑149 (MQ=255)

                                                                        gaagcgaGTCATCCTGCACGACCCACCAATCTTAAAGAGTGGACCCGAGTAAAAATGTTTCAGGTACCTACCGTATGGGTCGTGAGCTCAGTTGGTAGAGCGGGTGCGGTTTAATCGATTGGTCGCGGGTTCGAATCCTGCACGACgca                                                                              >  2:449846/1‑149 (MQ=25)

                                                                         aagcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAAGGGTTCAGGTAACAACCGTATGGGGAGTTAGATCTGTTGGTAGTGCAGGTGACTTTTAAGCAATTGGTCGCAGGTTCGAATCCTGCAcgaccgac                                                                             >  2:449877/1‑149 (MQ=25)

                                                                          agcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGACCCCGAGTAAAAATAGTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGAATATGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccacc                                                                            >  2:449876/1‑149 (MQ=25)

                                                                                 cATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTATCAGGAACCACCCGTATGGGTCGTTAGCACAGGTGGTAGAGCAGATGAGGATTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaa                                                                     >  2:449874/1‑149 (MQ=21)

                                                                                     cTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGCCGTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggt                                                                 >  2:449866/1‑149 (MQ=255)

                                                                                      tGCACGACCCACCAATCTTAAAGATTGGCCACGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                                >  2:449839/1‑149 (MQ=255)

                                                                                        cACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGAGTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                              >  2:449849/1‑149 (MQ=255)

                                                                                               caccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                         >  2:449776/1‑115 (MQ=255)

                                                                                               caccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                         <  1:449775/115‑1 (MQ=255)

                                                                                               caccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGt                                                       >  1:449826/1‑149 (MQ=255)

                                                                                                accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggt                                                                 >  1:449839/1‑138 (MQ=255)

                                                                                                accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTa                                                      <  2:449777/149‑1 (MQ=255)

                                                                                                 ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTag                                                     <  2:449778/149‑1 (MQ=255)

                                                                                                 ccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTag                                                     >  1:449836/1‑149 (MQ=255)

                                                                                                   aaTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAcc                                                                                >  1:449778/1‑120 (MQ=255)

                                                                                                     tCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAATGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                                 >  2:449843/1‑149 (MQ=255)

                                                                                                       ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACg                                               >  1:449835/1‑149 (MQ=255)

                                                                                                        tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                                 <  1:798703/146‑1 (MQ=255)

                                                                                                         aaaGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTg                                             >  1:449840/1‑149 (MQ=255)

                                                                                                          aaGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGa                                            >  1:449843/1‑149 (MQ=255)

                                                                                                            gATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTaa                                                                                                                 >  1:449783/1‑78 (MQ=255)

                                                                                                               tGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGAt                                       >  1:449844/1‑149 (MQ=255)

                                                                                                                 gCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTaa                                                                                                                 >  2:449921/1‑73 (MQ=255)

                                                                                                                  ccccGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGa                                        <  1:449779/145‑1 (MQ=255)

                                                                                                                   cccGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAAc                                    <  1:449780/148‑1 (MQ=255)

                                                                                                                      gAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGtt                                 >  1:449837/1‑148 (MQ=255)

                                                                                                                       aGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaaa                                                                   >  1:449914/1‑112 (MQ=255)

                                                                                                                        gTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGc                               <  1:449781/148‑1 (MQ=255)

                                                                                                                          aaaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAt                                                                                                            >  1:449782/1‑69 (MQ=255)

                                                                                                                          aaaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAt                                                                                                            <  2:449783/69‑1 (MQ=255)

                                                                                                                               tCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCaa                                                                                                             >  1:449784/1‑63 (MQ=255)

                                                                                                                               tCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCaa                                                                                                             <  2:449785/63‑1 (MQ=255)

                                                                                                                                cTTTCCGGTAACACCCGTATGGGTCGTTAGCGCAGTTGGTAGAGCAGTTGACTTTTACTCACTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAAc                      <  1:449785/149‑1 (MQ=255)

                                                                                                                                  ttCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCaa                       <  2:449787/146‑1 (MQ=255)

                                                                                                                                    cAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGaa                                                                                            <  2:449788/75‑1 (MQ=255)

                                                                                                                                    cAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGaa                                                                                            >  1:449787/1‑75 (MQ=255)

                                                                                                                                      ggTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGa                                                                                             >  1:449788/1‑72 (MQ=255)

                                                                                                                                      ggTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGa                                                                                             <  2:449789/72‑1 (MQ=255)

                                                                                                                                      ggTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAAt                                                                                           >  2:449922/1‑74 (MQ=255)

                                                                                                                                      ggTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTg                                                                                       >  2:449909/1‑78 (MQ=255)

                                                                                                                                       gaaccacCCGAAGGGGTCGGTAGCTCAGTTGGTAGAGCAGGAGACTTCTAATCACTAGGTCGCAGGGTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGa               <  1:449805/145‑1 (MQ=21)

                                                                                                                                       gTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaa                                                                    >  1:449905/1‑96 (MQ=255)

                                                                                                                                        tAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTa                                                            >  1:449849/1‑103 (MQ=255)

                                                                                                                                         aaCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTATTCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAg             <  2:449791/149‑1 (MQ=255)

                                                                                                                                            acCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTa                                                                      >  1:449912/1‑89 (MQ=37)

                                                                                                                                            acCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTa                                                                      <  2:449913/89‑1 (MQ=37)

                                                                                                                                              ccGTATGGGTCGTTAGCTCATTAGGTAGAGCAGTCGACTTATAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCga        <  2:449792/149‑1 (MQ=255)

                                                                                                                                              ccGTAGGGGTCGCTAGCTCAGTTGGTAGAGCAGGAGACTGTTACTCACTTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCga        <  2:449793/149‑1 (MQ=21)

                                                                                                                                                 tATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCa                                                                                                    <  2:449794/54‑1 (MQ=33)

                                                                                                                                                 tATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCa                                                                                                    >  1:449793/1‑54 (MQ=33)

                                                                                                                                                  aTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATc                                                                                                               <  1:449901/42‑1 (MQ=32)

                                                                                                                                                  aTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATc                                                                                                               >  2:449902/1‑42 (MQ=32)

                                                                                                                                                    gggTCGTTAGCTCAGTTTTTAGAGCAGTTGACTTTTAATCAATTGTTCGAAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTTGTTACTGGTAGATAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGaa  <  2:449813/149‑1 (MQ=18)

                                                                                                                                                    gggTCGTTAGCTCAGTTGGTAGAGCATTTTACTTATACTCACTTGGTCGCAGGTTCTAATCCTGCACGACCCACCAATTTATAGTTGGTTACTGTTAGATATCGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGaa  <  2:449802/149‑1 (MQ=18)

                                                                                                                                                    gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                              <  1:449811/89‑1 (MQ=255)

                                                                                                                                                    gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                                <  1:449804/87‑1 (MQ=39)

                                                                                                                                                    gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGaa                                           <  1:449808/108‑1 (MQ=255)

                                                                                                                                                    gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAAc                                    <  1:449797/115‑1 (MQ=255)

CAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGAA  >  U00096/781221‑781517

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.