Predicted mutation
evidence seq id position mutation annotation gene description
MC JC U00096 1,618,080 Δ1,317 bp [ydeA]–[marR] [ydeA], marC, [marR]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ U00096 1618080 1619396 1317 170 [1] [3] 173 [ydeA]–[marR] [ydeA],marC,[marR]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? U00096 = 16180791 (0.010)168 (0.950) 105/292 0.7 98.8% coding (1052/1191 nt) ydeA L‑arabinose exporter
?U00096 1619397 = 3 (0.020)coding (278/435 nt) marR DNA‑binding transcriptional repressor MarR

Only 100 of 170 total aligned reads displayed.

GGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTGGTAGGTAATCAGGTGAGTTTGCACTGGTCAATGTCGATGATTGGTTATGTGGGCGCGGTGCCTGCTTTTGCCGCGTTAATTTGGTCAATCATTATATTTCGCCGCTGGCCAGTGACACTCGAAGAACAGACGCAATAGTTGAAAGG  >  U00096/1617931‑1618226
                                                                                                                                                    |                                                                                                                                                   
ggggTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGtt                                                                                                                                                     >  2:896923/1‑149 (MQ=255)
        gAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggc                                                                                                                                             >  2:1590165‑M1/1‑141 (MQ=255)
        gAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggc                                                                                                                                             >  2:897039‑M1/1‑141 (MQ=255)
        gAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggc                                                                                                                                             >  1:897035‑M1/1‑141 (MQ=255)
          gTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgt                                                                                                                                           >  2:896954‑M1/1‑139 (MQ=255)
            aTTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtac                                                                                                                                         >  2:896990‑M1/1‑137 (MQ=255)
              tttCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactg                                                                                                                                       <  2:896927‑M1/149‑15 (MQ=255)
                 cTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGGCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggta                                                                                                                                    <  1:896927‑M1/149‑18 (MQ=255)
                   gggggATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaa                                                                                                                                  <  1:896930‑M1/149‑20 (MQ=255)
                        aTCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaactta                                                                                                                             >  1:896984‑M1/1‑125 (MQ=255)
                        aTCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaactta                                                                                                                             <  2:896932‑M1/149‑25 (MQ=255)
                        aTCGCGATGATGATCATCGGGCTTCGCATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaactta                                                                                                                             <  2:896933‑M1/149‑25 (MQ=255)
                         tCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaactta                                                                                                                             <  1:896933‑M1/148‑25 (MQ=255)
                           gcgATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttacca                                                                                                                          >  1:896980‑M1/1‑122 (MQ=255)
                            cgATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccac                                                                                                                         >  1:896970‑M1/1‑121 (MQ=255)
                             gatgatgatCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtacaccttaccac                                                                                                                         >  1:897071‑M1/1‑120 (MQ=255)
                             gatgatgatCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccacc                                                                                                                        >  2:897066‑M1/1‑120 (MQ=255)
                              atgatgatCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccg                                                                                                                       >  1:897039‑M1/1‑119 (MQ=255)
                                gatgatCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggc                                                                                                                     >  2:896972‑M1/1‑117 (MQ=255)
                                  tgatCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcgg                                                                                                                   >  2:897089‑M1/1‑115 (MQ=255)
                                  tgatCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcgg                                                                                                                   >  2:897078‑M1/1‑115 (MQ=255)
                                       atcGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcgg                                                                                                              >  2:897051‑M1/1‑110 (MQ=255)
                                        tcGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggc                                                                                                             <  2:896937‑M1/149‑41 (MQ=255)
                                              ttGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatg                                                                                                       <  2:896939‑M1/149‑47 (MQ=255)
                                               tGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGTAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgt                                                                                                      <  1:896939‑M1/149‑48 (MQ=255)
                                                ggTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtg                                                                                                     >  1:897064‑M1/1‑101 (MQ=255)
                                                   aTGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaac                                                                                                  <  2:896941‑M1/149‑52 (MQ=255)
                                                       aGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatg                                                                                              >  2:897018‑M1/1‑94 (MQ=255)
                                                          ttAAAGTGCTGGGGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTGCGGCATATTTAATATTGGAATCGGGGCGGGTTCGTTagcgcggcgtactggtaaaacttacgaccggcggcgcggcaatatgtgaacaatgcca                                                                                           <  1:896943‑M1/149‑59 (MQ=255)
                                                           tAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgcca                                                                                           <  1:896944‑M1/148‑59 (MQ=255)
                                                            aaaGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatc                                                                                         <  2:896946‑M1/149‑61 (MQ=255)
                                                                tGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaatt                                                                                     <  1:896948‑M1/149‑65 (MQ=255)
                                                                  ctggcgctggcACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattag                                                                                   >  2:897025‑M1/1‑83 (MQ=255)
                                                                  ctggcgctggcACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattag                                                                                   >  2:897024‑M1/1‑83 (MQ=255)
                                                                  ctggcgctggcACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattag                                                                                   >  2:897055‑M1/1‑83 (MQ=255)
                                                                   tggcgctggcACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagt                                                                                  <  1:896950‑M1/149‑68 (MQ=255)
                                                                   tggcgctggcACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagt                                                                                  <  2:896952‑M1/149‑68 (MQ=255)
                                                                       gctggcACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggc                                                                              >  1:897025‑M1/1‑78 (MQ=255)
                                                                        ctggcACCAGATGCTACCGACGTCGCGAGGGCGCTCATCTCCGGCATATTTAATATTGGAACCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggctgcgcggcaatatgtgaacaatgccatcaattagttggc                                                                              <  1:896977‑M1/148‑72 (MQ=255)
                                                                         tggcACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggcca                                                                            >  1:897079‑M1/1‑76 (MQ=255)
                                                                         tggcACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggcc                                                                             <  1:896953‑M1/148‑73 (MQ=255)
                                                                           gcACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccagg                                                                          >  1:897059‑M1/1‑74 (MQ=255)
                                                                            cACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccagga                                                                         >  1:896976‑M1/1‑73 (MQ=255)
                                                                            cACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccagga                                                                         <  2:896992‑M1/149‑77 (MQ=255)
                                                                            cACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagtt                                                                                 <  1:896954‑M1/141‑69 (MQ=255)
                                                                               cAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggac                                                                        <  1:896968‑M1/147‑78 (MQ=255)
                                                                                aGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctg                                                                     >  1:897060‑M1/1‑69 (MQ=255)
                                                                                aGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctg                                                                     >  1:897047‑M1/1‑69 (MQ=255)
                                                                                aGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctg                                                                     >  2:897042‑M1/1‑69 (MQ=255)
                                                                                  aTGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgca                                                                   <  1:897008‑M1/149‑83 (MQ=255)
                                                                                    gCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtcaacaaagccatcaattagttgcccaggacctgcacc                                                                 >  2:897126‑M1/1‑65 (MQ=255)
                                                                                     cTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacct                                                                      <  1:897003‑M1/143‑80 (MQ=255)
                                                                                      tACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaa                                                               >  1:897097‑M1/1‑63 (MQ=255)
                                                                                      tACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaa                                                               <  2:896984‑M1/149‑87 (MQ=255)
                                                                                      tACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaa                                                               >  2:897075‑M1/1‑63 (MQ=255)
                                                                                      tACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaa                                                               <  1:896988‑M1/149‑87 (MQ=255)
                                                                                      tACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaa                                                               <  2:896976‑M1/149‑87 (MQ=255)
                                                                                        ccGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcac                                                                  >  1:897042‑M1/1‑61 (MQ=255)
                                                                                          gACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaat                                                           >  2:897069‑M1/1‑59 (MQ=255)
                                                                                            cGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaatta                                                         <  2:897020‑M1/149‑93 (MQ=255)
                                                                                              tCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaac                                                       <  2:896986‑M1/149‑95 (MQ=255)
                                                                                              tCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaac                                                       <  2:896982‑M1/149‑95 (MQ=255)
                                                                                              tCGCGATGGCGCTATTCTCCGGAAAATTTAATATTGGAATCGGGGCGCGTTCGTTagctcggcgtactggtaaaacttaccaccggcggcgcggcaatatgttaacaatgccatcaattagttggccaggacctgcaccaagaattaac                                                       <  1:1193300‑M1/149‑95 (MQ=255)
                                                                                               cgcgATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaaca                                                      >  2:896968‑M1/1‑54 (MQ=255)
                                                                                               cgcgATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaaca                                                      <  2:897016‑M1/149‑96 (MQ=255)
                                                                                                gcgATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaa                                                     <  1:896998‑M1/149‑97 (MQ=255)
                                                                                                  gATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaa                                                   >  2:897086‑M1/1‑51 (MQ=255)
                                                                                                     ggCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaac                                                >  1:897073‑M1/1‑48 (MQ=255)
                                                                                                      gcgcTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccagcggcggcgcggcaatatgtgatcaatgccatcaattattttgccaggacctgcaccaagaattaacaaaaaacc                                               <  2:896995‑M1/149‑103 (MQ=255)
                                                                                                        gcTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagtt                                                                                 >  1:1982149‑M1/1‑45 (MQ=255)
                                                                                                        gcTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggagcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctg                                             >  1:897045‑M1/1‑45 (MQ=255)
                                                                                                          tATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttacccccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgac                                           >  1:897108‑M1/1‑43 (MQ=255)
                                                                                                          tATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgac                                           >  1:897020‑M1/1‑43 (MQ=255)
                                                                                                          tATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgac                                           <  2:897010‑M1/149‑107 (MQ=255)
                                                                                                          tATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgac                                           <  1:897001‑M1/149‑107 (MQ=255)
                                                                                                           aTTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacg                                          <  1:896971‑M1/149‑108 (MQ=255)
                                                                                                           aTTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacg                                          <  1:897011‑M1/149‑108 (MQ=255)
                                                                                                           aTTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacg                                          <  1:896995‑M1/149‑108 (MQ=255)
                                                                                                           aTTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacg                                          <  1:896997‑M1/149‑108 (MQ=255)
                                                                                                            ttCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacgg                                         >  2:897058‑M1/1‑41 (MQ=255)
                                                                                                            ttCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacgg                                         >  2:897057‑M1/1‑41 (MQ=255)
                                                                                                            ttCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctg                                             <  1:897005‑M1/145‑105 (MQ=255)
                                                                                                               tcCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcgg                                      >  2:897099‑M1/1‑38 (MQ=255)
                                                                                                                ccGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggc                                        <  2:896988‑M1/146‑110 (MQ=255)
                                                                                                                ccGGCATATTTAATATTGGAATCGGGGCGGGTGCGGTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgccggc                                        <  1:896973‑M1/146‑110 (MQ=255)
                                                                                                                  ggCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggccctgcaccaagaattaacaaaaaacctgacggcggacg                                   >  2:897097‑M1/1‑35 (MQ=255)
                                                                                                                   gCATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccaacaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacga                                  >  2:897117‑M1/1‑34 (MQ=255)
                                                                                                                    cATATTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacg                                   <  1:896989‑M1/147‑115 (MQ=255)
                                                                                                                      tatTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacgaagt                               <  1:897014‑M1/149‑119 (MQ=255)
                                                                                                                       atTTAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacgaagtg                              >  1:897102‑M1/1‑30 (MQ=255)
                                                                                                                        tttAATATTGGAATCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacgaagtgg                             >  2:897084‑M1/1‑29 (MQ=255)
                                                                                                                                 ggAATTGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaaaaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacgaagtggcaacacttg                    <  2:896980‑M1/149‑130 (MQ=255)
                                                                                                                                   aaTCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacgaagtggcaacacttgag                  >  1:897111‑M1/1‑18 (MQ=255)
                                                                                                                                    aTCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacgaagtggcaacacttgagt                 <  1:897017‑M1/149‑133 (MQ=255)
                                                                                                                                    aTCGGGGCGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacgaagtggcaacacttgagt                 <  1:897013‑M1/149‑133 (MQ=255)
                                                                                                                                           cGGGTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacgaagtggcaacacttgagtatttgct          <  2:897008‑M1/149‑140 (MQ=255)
                                                                                                                                            gggTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacgaagtggcaacacttgagtatttgctt         >  2:897094‑M1/1‑9 (MQ=255)
                                                                                                                                            gggTGCGTTagcgcggcgtactggtaaaacttaccaccggcggcgccgcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacgaagtggcaacacttgagtatttgctt         <  2:897001‑M1/149‑141 (MQ=255)
                                                                                                                                                  gTTagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacgaagtggcaacacttgagtatttgcttaagaaa   <  2:896977‑M1/149‑147 (MQ=255)
                                                                                                                                                   ttagcgcggcgtactggtaaaacttaccaccggcggcgcggcaatatgtgaacaatgccatcaattagttggccaggacctgcaccaagaattaacaaaaaacctgacggcggacgaagtggcaacacttgagtatttgcttaagaaag  <  2:897000‑M1/149‑148 (MQ=255)
                                                                                                                                                    |                                                                                                                                                   
GGGGTGCTGAGTATTTTCTGGGGGATCGCGATGATGATCATCGGGCTTGGTATGCAGGTTAAAGTGCTGGCGCTGGCACCAGATGCTACCGACGTCGCGATGGCGCTATTCTCCGGCATATTTAATATTGGAATCGGGGCGGGTGCGTTGGTAGGTAATCAGGTGAGTTTGCACTGGTCAATGTCGATGATTGGTTATGTGGGCGCGGTGCCTGCTTTTGCCGCGTTAATTTGGTCAATCATTATATTTCGCCGCTGGCCAGTGACACTCGAAGAACAGACGCAATAGTTGAAAGG  >  U00096/1617931‑1618226

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑