BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	U00096	781369 =	140 (0.620)	75 (0.330) +G	10/290	24.1	42.4%	noncoding (1/76 nt)	lysZ	tRNA‑Lys
*	?	U00096	= 2521129	65 (0.290)	75 (0.330) +G	10/290	24.1	42.4%	intergenic (+3/‑44)	valX/valY	tRNA‑Val/tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 145 total aligned reads displayed.

GTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAC  >  U00096/781223‑781514

 ttttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATggg                                                                                                                                                 <  1:585656/148‑1 (MQ=255)

 ttttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGt                                                                                                                                                >  1:585683/1‑149 (MQ=255)

    tAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCg                                                                                                                                              >  1:585710/1‑148 (MQ=255)

     aaCATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGTACCCGAGTAAAACTCTTTCAGGTAACACCCGTATGGGTCGtt                                                                                                                                            >  1:585692/1‑149 (MQ=255)

     aaCATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGtt                                                                                                                                            <  1:585659/149‑1 (MQ=255)

      aCATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGTCCACGAGTAAAAAGCGTTGGGGTACCAGGCGTGTGGGTCGGTa                                                                                                                                           >  2:585785/1‑149 (MQ=18)

      aCATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTa                                                                                                                                           <  1:585660/149‑1 (MQ=255)

         tCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCAAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCt                                                                                                                                        >  1:585713/1‑149 (MQ=255)

          cAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                                                                       <  2:585662/149‑1 (MQ=255)

          cAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTc                                                                                                                                       <  2:585663/149‑1 (MQ=255)

           aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                                      >  2:585874/1‑149 (MQ=255)

              cTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGACGCGAGTAAAAATCTTTCAGGTAACTAGCGTATGGGTCGTTAGCTCAggt                                                                                                                                   >  2:585749/1‑147 (MQ=21)

              cTCACATGCCAAGCGTGAAGGATCCCGCTGCGCCAGCAACGGCCCGTAGGGCGAGCGCAGCGAGGCATCCTGCACGACCTACCAATCTTTTACCCTGGCCCCTAGTAAACATCTTTCATGTAACACCCTTATGGGTCGTTAGCTCAGtt                                                                                                                                   <  2:585666/149‑1 (MQ=18)

                cAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGAACGACCCCCCAAACTGAAAGATTTTCACCGAGATAAAATAAGAGAGGTGTCAAGCGAAAGGGTCGTTAGCTCAGTTgg                                                                                                                                 >  2:585826/1‑149 (MQ=9)

                    tGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAACTCTTTCAGGTAACACCCGTAGGGGTCGTTAGGGCAGTTGGTtga                                                                                                                             >  1:585705/1‑149 (MQ=25)

                       tAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATGTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCa                                                                                                                          >  2:585700/1‑149 (MQ=255)

                         aGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAg                                                                                                                         <  1:585667/148‑1 (MQ=255)

                          gCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGtt                                                                                                                       <  1:585669/149‑1 (MQ=255)

                          gCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATATTAAAGATTGGCCCCGAGTAAAAATCTTTAAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGtt                                                                                                                       >  2:585688/1‑149 (MQ=255)

                             tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCGGGTAACAGGCGTATGGGTCGTGAGCTCGGTTGGGAGAGCAGTTggg                                                                                                                    >  2:585712/1‑147 (MQ=25)

                             tGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGACCCGAGTAAAACGCGTTGAGGTAACACCCGTTTGGGTCGTTAGCGCAGGTGGTAGAGcgggggac                                                                                                                    >  2:585709/1‑142 (MQ=21)

                              gAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACt                                                                                                                   >  2:585696/1‑149 (MQ=255)

                                aGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACttt                                                                                                                 >  2:585670/1‑149 (MQ=255)

                                 ggATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCCCCAAACTGAAAGATTTTCCCCGAGGAAAAATCTATCAGGATACACCCGTATGGGAAGATAGGTGAGGTGGGAGAGCAGGTGAAtttt                                                                                                                >  2:585832/1‑149 (MQ=18)

                                     aaCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATc                                                                                                            >  2:585867/1‑149 (MQ=255)

                                        gTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAt                                                                                                         >  2:585699/1‑149 (MQ=255)

                                            cgcCAGCAACGGCCCGTACGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACTCCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTgg                                                                                                      <  1:585675/148‑1 (MQ=255)

                                                aGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCa                                                                                                 <  2:585676/149‑1 (MQ=255)

                                                    aCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATg                                                                                                                                                   >  1:1797652/1‑95 (MQ=255)

                                                    aCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGGTAGCTCAGTTGGTAGAGCAGTGGCCTTTTAATCAATTGGTCGCAGGtt                                                                                             >  1:585746/1‑149 (MQ=255)

                                                    aCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATATTAAAGATTGTCCACGAATAAAAATCTTTCAGGTAACACCCGTAAGGGTCGTTAGATCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCTCAGGtt                                                                                             >  2:585784/1‑149 (MQ=37)

                                                           gTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                      <  1:585678/149‑1 (MQ=255)

                                                           gTAGGGAGTGCGACTCGAGTCATCCTGCACGTAGCCCCAATCTTATAGACTGGCCCCGTCTTAAAAACTTTCCGCTAACCCCCGAAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                      <  2:585862/149‑1 (MQ=17)

                                                                      gaagcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGAccc                                                                            <  1:585680/148‑1 (MQ=255)

                                                                      gaagcgaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACcca                                                                           >  2:585932/1‑149 (MQ=255)

                                                                           gaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGc                                                                                   >  1:585682/1‑136 (MQ=255)

                                                                           gaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGc                                                                                   <  2:585682/136‑1 (MQ=255)

                                                                             gTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAttt                                                                    >  2:1915076/1‑149 (MQ=255)

                                                                                aTCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCATGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTaaa                                                                 <  2:585685/149‑1 (MQ=255)

                                                                                aTCCTGAACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTaaa                                                                 <  2:585686/149‑1 (MQ=255)

                                                                                       aCGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaaaaagcgc                                                          >  2:585878/1‑142 (MQ=255)

                                                                                         gACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGt                                                                                                     >  1:585868/1‑104 (MQ=255)

                                                                                         gACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaa                                                                 >  1:585689/1‑140 (MQ=255)

                                                                                          aCCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGTTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACt                                                       <  1:585688/149‑1 (MQ=255)

                                                                                            ccaccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAgg                                                                                               >  1:585704/1‑107 (MQ=255)

                                                                                            ccaccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTgg                                                     >  2:585765/1‑149 (MQ=255)

                                                                                             caccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggcaaacgt                                                     >  1:3609727/1‑141 (MQ=255)

                                                                                                 aaTCTTAAAGTTTTGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGTTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGGTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTagag                                                <  2:585691/149‑1 (MQ=255)

                                                                                                  aTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTag                                                  >  2:585794/1‑146 (MQ=255)

                                                                                                   gccagcaGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                              <  2:1325185/143‑1 (MQ=255)

                                                                                                      ttaaGATTGGCCCGGAGTAAATATCTTTCAGGTAACAACCGTTTGTTTCGTTAGCTCAGTTGGTAGAGCAGTTTACTTTTACTAATGTGTTCGAAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGt                                           <  2:585692/147‑1 (MQ=21)

                                                                                                      tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTa                                                                                                               >  1:585708/1‑81 (MQ=255)

                                                                                                      tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAgaga                                               <  1:585693/145‑1 (MQ=255)

                                                                                                      tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGaa                                              <  2:585695/146‑1 (MQ=255)

                                                                                                      tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACg                                            >  1:585778/1‑148 (MQ=255)

                                                                                                         aGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGaa                                        <  1:585696/149‑1 (MQ=255)

                                                                                                         aGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGaa                                        >  1:585772/1‑149 (MQ=255)

                                                                                                          gATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGtt                                                                                                                                            >  2:585882/1‑48 (MQ=255)

                                                                                                           aTTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAgg                                      >  2:585759/1‑149 (MQ=255)

                                                                                                            ttGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGa                                     >  2:585756/1‑149 (MQ=255)

                                                                                                              ggCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGCCTTTTAATCAATTGGTCGCAGGTTCGAATCCTGc                                                                                   <  1:585697/101‑1 (MQ=255)

                                                                                                               gCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATaa                                  <  1:585699/149‑1 (MQ=255)

                                                                                                                 cccGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGGACGACCCACCAATGTaaaa                                                                >  1:585873/1‑116 (MQ=255)

                                                                                                                  ccGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTTACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGt                               <  1:585700/149‑1 (MQ=255)

                                                                                                                  ccGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGa                                                                                                                     >  2:585870/1‑63 (MQ=255)

                                                                                                                   cGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTg                                                                                                                                  >  1:585801/1‑49 (MQ=255)

                                                                                                                    gAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTg                             >  2:2945352/1‑149 (MQ=255)

                                                                                                                      gTAAAAATCTTTCAGGTAACACCCGTATGTGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCTATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCg                           <  2:585702/149‑1 (MQ=255)

                                                                                                                      gTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAATGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCg                           >  2:585793/1‑149 (MQ=255)

                                                                                                                        aaaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTa                                                   <  2:585703/123‑1 (MQ=255)

                                                                                                                        aaaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTa                                                   >  1:585703/1‑123 (MQ=255)

                                                                                                                          aaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAg                       >  2:585796/1‑149 (MQ=255)

                                                                                                                             tCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccacca                                                                        <  2:585706/97‑1 (MQ=255)

                                                                                                                             tCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccacca                                                                        <  2:585707/97‑1 (MQ=255)

                                                                                                                             tCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACccacca                                                                        >  1:585707/1‑97 (MQ=255)

                                                                                                                             tCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGc                      >  1:585773/1‑147 (MQ=255)

                                                                                                                              cTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGACCGTGAAGGATAACGTTGCGTTAGCAAc                   >  2:585797/1‑149 (MQ=255)

                                                                                                                               tttCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACg                  >  1:585741/1‑149 (MQ=255)

                                                                                                                                 tCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCa                                                                                                 <  1:585711/68‑1 (MQ=255)

                                                                                                                                 tCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCa                                                                                                 >  2:585711/1‑68 (MQ=255)

                                                                                                                                 tCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGc                >  1:585799/1‑149 (MQ=255)

                                                                                                                                  ccggTACCCCCCGTATGTCTCGTTAGCTCAGTTGGTAGCGCAGTTGTCTTTTACTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCTCCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGcc               <  2:585739/147‑1 (MQ=21)

                                                                                                                                     gcaccccccGTAGGGGACGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTCCTCCATCGGTCGCAGCGTCGAATCCTGCACGACCCACCAATTTAAAGGCCTTTACTGGTCGAGACCGTGAAGGATAACGTTGCGTTAGCAACGGCCCGa            <  2:585718/143‑1 (MQ=18)

                                                                                                                                     gTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGccc              <  1:585714/147‑1 (MQ=255)

                                                                                                                                     gTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGccc              >  2:585714/1‑147 (MQ=255)

                                                                                                                                     gTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGa            <  2:585715/149‑1 (MQ=255)

                                                                                                                                       aaCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCa                                                                                                           <  1:585717/52‑1 (MQ=255)

                                                                                                                                       aaCACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCa                                                                                                           >  2:585717/1‑52 (MQ=255)

                                                                                                                                        acacCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAATGGTCGCAGGTTCGAATCCTGCACGACACACCAATTTAAAGGTGGTTACTGGTAGAGAAAGTGAAGGATAACGTTGCGTTAGCACCGGCCCGAAgg         >  1:585803/1‑149 (MQ=255)

                                                                                                                                          acCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAggg        >  1:585788/1‑148 (MQ=255)

                                                                                                                                           cccGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaa                                                                  >  2:585879/1‑89 (MQ=25)

                                                                                                                                           cccGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaa                                                                  <  1:585879/89‑1 (MQ=25)

                                                                                                                                              gTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGaa                                                                                         <  1:585870/63‑1 (MQ=35)

                                                                                                                                               tATGGGGCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCTACGGCCCGAAGGGCGAGAc  >  2:2345351/1‑149 (MQ=255)

                                                                                                                                                aTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAAt                                                                                        <  1:585876/62‑1 (MQ=31)

                                                                                                                                                aTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAAt                                                                                        >  2:585876/1‑62 (MQ=31)

                                                                                                                                                  gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTa                                                                   <  1:585723/81‑1 (MQ=33)

                                                                                                                                                  gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                             <  1:585736/87‑1 (MQ=39)

                                                                                                                                                  gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAg                                                                <  1:585733/84‑1 (MQ=35)

                                                                                                                                                  gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTa                                                         <  1:585727/91‑1 (MQ=255)

GTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAC  >  U00096/781223‑781514

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.