| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| JC JC | U00096 | 1,618,850 | IS5 (–) +4 bp | coding (56‑59/666 nt) | marC ← | inner membrane protein MarC |
| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | U00096 | 1618850 = | 0 (0.000) | 313 (1.380) | 163/292 | 0.1 | 100% | coding (59/666 nt) | marC | inner membrane protein MarC |
| ? | U00096 | = 2290113 | NA (NA) | noncoding (1/1195 nt) | IS5 | repeat region | |||||
| * | ? | U00096 | = 1618853 | 0 (0.000) | 211 (0.930) | 120/292 | 1.2 | 100% | coding (56/666 nt) | marC | inner membrane protein MarC |
| ? | U00096 | 2101749 = | NA (NA) | noncoding (1195/1195 nt) | IS5 | repeat region | |||||
Only 100 of 493 total aligned reads displayed.
TGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGC > U00096/1618705‑1619001 | tGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAg > 2:1595102/1‑149 (MQ=255)gacaagaaaatctcttttctgggctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg > 2:2838484‑M1/146‑149 (MQ=255) tATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGgg < 2:1215582‑M1/149‑3 (MQ=255) aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgctccttccTTAGCTa < 2:1049695‑M1/7‑1 (MQ=255) aagaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTa < 2:1215759‑M1/7‑1 (MQ=255) aTCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCTCTGTTCATGTTGCCTTCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGgga < 1:1215583‑M1/149‑4 (MQ=255) gaaaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAAc < 2:1215703‑M1/9‑1 (MQ=255) cATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaagg < 2:1215589‑M1/149‑7 (MQ=255) aaatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACgg > 1:1049848‑M1/139‑149 (MQ=255) aatctcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGgc > 2:1049830‑M1/138‑149 (MQ=255) aCCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcg > 1:1215594‑M1/1‑139 (MQ=255) tcttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGgcagca < 1:1215722‑M1/16‑1 (MQ=255) cttttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGgca > 2:1049724‑M1/133‑145 (MQ=255) tttctggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCaa > 1:1049763‑M1/131‑147 (MQ=255) ttGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataa < 2:1215599‑M1/149‑16 (MQ=255) ccGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcgg < 2:1215604‑M1/149‑20 (MQ=255) ggtctgacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACaccacc < 1:1215710‑M1/24‑1 (MQ=255) ggCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcgggg < 1:1215606‑M1/149‑22 (MQ=255) ctgacggcgcttactgctgaattcactgtcggcgaaggtaaggtgatgactcatgatgaaccctgctctatggctccagatgacaatcatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGc > 2:1049774‑M1/123‑149 (MQ=255) gacggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGccc < 2:1215731‑M1/29‑1 (MQ=255) cggcgcttactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCa > 2:2607636‑M1/119‑149 (MQ=255) tACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattct > 2:1215611‑M1/1‑121 (MQ=255) gcgcgtactgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAg > 1:2415753‑M1/117‑148 (MQ=255) ccaccaTCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctc < 1:1215618‑M1/149‑33 (MQ=255) caccaTCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcg < 2:1215619‑M1/149‑34 (MQ=255) catcatGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggct > 2:1215624‑M1/1‑113 (MQ=255) tgctgaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGc < 1:1215746‑M1/41‑1 (MQ=255) gaattcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTa < 2:1215764‑M1/45‑1 (MQ=255) gatgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactca < 2:1215630‑M1/149‑43 (MQ=255) gatgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactca < 1:1215631‑M1/149‑43 (MQ=255) attcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCATCAACACACCAAGCCCCAGGCCAATTGCTTTaaa < 1:1215732‑M1/47‑1 (MQ=255) ttcactgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAAc > 1:1049686‑M1/102‑149 (MQ=255) gCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtc < 1:1215638‑M1/148‑46 (MQ=255) ctgtcggcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAg > 1:1049693‑M1/98‑129 (MQ=255) gtcggcgaatgtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCt > 1:1049805‑M1/96‑149 (MQ=255) aTACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAATTAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttc < 2:1215643‑M1/149‑51 (MQ=255) aCGTACACCGCGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcat < 1:1215646‑M1/149‑53 (MQ=255) gcgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACa > 2:2415801‑M1/92‑149 (MQ=255) cgaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACAt > 1:1049675‑M1/91‑149 (MQ=255) gaaggtaagttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACAtt < 1:1215737‑M1/60‑1 (MQ=255) cacCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttctt < 1:1215653‑M1/149‑58 (MQ=255) acCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttc < 2:1215656‑M1/149‑59 (MQ=255) gttgatgactcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGgttg > 2:1049679‑M1/82‑149 (MQ=255) cATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga > 1:2607034‑M1/1‑83 (MQ=255) cATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttga < 1:1215663‑M1/149‑67 (MQ=255) tCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagc < 2:1215667‑M1/149‑69 (MQ=255) actcatgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATcc > 1:1049681‑M1/75‑148 (MQ=255) gACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttca > 1:1215669‑M1/1‑76 (MQ=255) tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAg > 1:517766‑M1/70‑73 (MQ=255) tgatgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTa > 2:1743023‑M1/70‑149 (MQ=255) gACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgatttttt > 1:1595177‑M1/1‑72 (MQ=255) tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCt > 1:1215715‑M1/67‑149 (MQ=255) tgaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCt < 1:1215772‑M1/83‑1 (MQ=255) cGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttct > 2:1188675‑M1/1‑70 (MQ=255) gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTg > 2:1215691‑M1/66‑149 (MQ=255) gaaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTg > 2:1215697‑M1/66‑149 (MQ=255) aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACCCCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTgg < 2:1215777‑M1/85‑1 (MQ=255) aaccctgttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTgg > 2:1215685‑M1/65‑149 (MQ=255) gttctatggctccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATc > 2:1215718‑M1/59‑149 (MQ=255) cGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatg < 2:1215532‑M1/149‑90 (MQ=255) atggctccagatgacaaacatgatctcatatcagtgacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGa > 2:2607680‑M1/54‑149 (MQ=255) aCTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgcctt < 1:1215391‑M1/149‑94 (MQ=255) ggctccagatgacaaacctgatctcatatcagggacttgttcgcaccttccTTAGCTACCGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGaaa > 2:2838414‑M1/52‑149 (MQ=255) tccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTTTCCTGTGTATCTGGGTTATCAGCGAAAAGt < 2:1215866‑M1/101‑1 (MQ=255) ccagatgacaaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGta > 1:1215680‑M1/48‑149 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGt < 2:1215832‑M1/110‑1 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGt < 2:1215749‑M1/110‑1 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGt > 2:1215710‑M1/40‑149 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGt > 1:1215698‑M1/40‑149 (MQ=255) caaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGGTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAgggg < 1:1215756‑M1/109‑1 (MQ=255) aaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTa > 2:1215723‑M1/39‑149 (MQ=255) aaacatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTa < 2:1215797‑M1/111‑1 (MQ=255) acatgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGGGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGNATAAGGGGTaa > 1:2838473‑M1/37‑148 (MQ=255) ccAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttaga < 2:1215574‑M1/149‑111 (MQ=255) tgatctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACaa > 1:1215688‑M1/34‑149 (MQ=255) tctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGa < 1:1215806‑M1/119‑1 (MQ=255) ctcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGAt < 1:1215795‑M1/120‑1 (MQ=255) cAAGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgttt > 1:2837770‑M1/1‑33 (MQ=255) tcatatcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATa < 2:2227340‑M1/121‑1 (MQ=255) aaGAAATAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttc > 2:1742347‑M1/1‑32 (MQ=255) aaaTAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttc > 1:1742382‑M1/1‑29 (MQ=255) aaaTAACGCGACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt > 1:1567524‑M1/1‑29 (MQ=255) tcagggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAgtg < 1:1215836‑M1/126‑1 (MQ=255) agggacttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAgtgt > 1:1215703‑M1/22‑148 (MQ=255) gacttgtccgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTCGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCAct < 1:1215819‑M1/131‑1 (MQ=255) cgAAAGTAGTTAATGGGTGAGggaatgtgcgaataagcggggaaattattatctgctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccattta < 2:1215649‑M1/149‑129 (MQ=255) gACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa < 1:1215503‑M1/149‑130 (MQ=255) gACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa > 2:516966‑M1/1‑20 (MQ=255) gACAGTTGTTAATGGGTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaa > 1:1050475‑M1/1‑20 (MQ=255) ttgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCtt < 2:1215818‑M1/134‑1 (MQ=255) tgttcgcaccttccTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACaa > 1:1215674‑M1/15‑130 (MQ=255) cgcaccttccTTAGCTAACTGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACAt > 1:2607660‑M1/11‑69 (MQ=255) ttccTTAGCTAACGGCAGCACCACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCtt > 2:1215677‑M1/5‑149 (MQ=255) gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagcccgtttcttcgccatttaaggcgttatccccagt > 1:517039‑M1/1‑5 (MQ=255) gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagt < 1:516944‑M1/149‑145 (MQ=255) gTTAGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttctt > 2:1050481‑M1/1‑5 (MQ=255) taagggaaggggcgaataagcggggaaattcttctcggctgactcaggcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgggtcttagccatttaaggcgttatccccagtt < 2:2837645‑M1/147‑146 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagtttt > 2:2837713‑M1/1‑2 (MQ=255) aGggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttt > 1:2416528‑M1/1‑2 (MQ=255) gggaaggtgcgaataagcggggaaattcttctcggctgactcagtcatttcatttcttcatgtttgagccgattttttctcccgtaaatgccttgaatcagcctatttagaccgtttcttcgccatttaaggcgttatccccagttttt > 2:1050454‑M1/1‑1 (MQ=255) | TGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGTATAAGGGGTAAACAAGGATAAAGTGTCACTCTTTAGCTAGCCTTGCATCGC > U00096/1618705‑1619001 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |