Predicted mutation
evidence seq id position mutation annotation gene description
MC JC U00096 1,618,499 Δ7 bp coding (404‑410/666 nt) marC ← inner membrane protein MarC

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ U00096 1618499 1618505 7 177 [0] [0] 180 marC inner membrane protein MarC

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? U00096 = 16184980 (0.000)175 (0.670) 117/292 2.3 100% coding (411/666 nt) marC inner membrane protein MarC
?U00096 1618506 = 0 (0.000)coding (403/666 nt) marC inner membrane protein MarC

Only 100 of 177 total aligned reads displayed.

GCCCACCAGCCGCATAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAA  >  U00096/1618351‑1618644
                                                                                                                                                   |                                                                                                                                                  
  ccacctGCCGCATAATTGCGCCGGATCTGCGTAGGCTTCCCCACAAAATAACCTCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGAGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtgg                                                                                                                                                 <  1:1410695‑M1/149‑4 (MQ=255)
  ccaccaGCCGCATAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtgg                                                                                                                                                 <  1:1410697‑M1/149‑4 (MQ=255)
  ccaccaGCAGCATAATTGCGCCTGAGCTGCGTAGGCTTCCACACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCTCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTTTGTACGCCGAGCTAATAATCtgg                                                                                                                                                 <  2:1410696‑M1/149‑4 (MQ=255)
   caccaGCCGCATAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggt                                                                                                                                                <  2:1410700‑M1/149‑5 (MQ=255)
   caccaGCCGCATAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggt                                                                                                                                                <  1:1410701‑M1/149‑5 (MQ=255)
    accaGCCGCATAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCCACCATCAGTCCCCAATCAGCGAAGGTTGACCTCTGACGCACTGTGGACGCCGAGCTAATAATCtggat                                                                                                                                               >  1:1410804‑M1/1‑144 (MQ=255)
      caGCCGCATAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcc                                                                                                                                             <  1:1410704‑M1/149‑8 (MQ=255)
        gccgccTAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccg                                                                                                                                           <  2:1410705‑M1/149‑10 (MQ=255)
           gCATAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggac                                                                                                                                        <  2:1410709‑M1/149‑13 (MQ=255)
           gCATAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggac                                                                                                                                        <  2:1410707‑M1/149‑13 (MQ=255)
           gCATAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggac                                                                                                                                        >  1:1410781‑M1/1‑137 (MQ=255)
              tAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccgg                                                                                                                                     <  2:1410711‑M1/149‑16 (MQ=255)
                aTTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggca                                                                                                                                   <  2:1410713‑M1/149‑18 (MQ=255)
                  tGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagt                                                                                                                                 <  2:1410714‑M1/149‑20 (MQ=255)
                      ccGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtactt                                                                                                                             <  1:1410715‑M1/149‑24 (MQ=255)
                       cGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttg                                                                                                                            <  1:1410716‑M1/149‑25 (MQ=255)
                        ggAGCTGCGTAGGCTTCCCCACAAACTAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGGTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttgg                                                                                                                           <  2:1410718‑M1/149‑26 (MQ=255)
                            cTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcatt                                                                                                                       <  1:1410722‑M1/149‑30 (MQ=255)
                            cTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAAGCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcatt                                                                                                                       <  2:1410720‑M1/149‑30 (MQ=255)
                             tGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattg                                                                                                                      >  2:1410851‑M1/1‑119 (MQ=255)
                             tGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattg                                                                                                                      >  2:1410814‑M1/1‑119 (MQ=255)
                               cGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgcc                                                                                                                    <  2:1410726‑M1/149‑33 (MQ=255)
                               cGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgcc                                                                                                                    <  1:1410725‑M1/149‑33 (MQ=255)
                                  aGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagc                                                                                                                 <  2:1410729‑M1/149‑36 (MQ=255)
                                  aGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccag                                                                                                                  <  1:1410730‑M1/148‑35 (MQ=255)
                                  aGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgcca                                                                                                                   <  1:1410728‑M1/147‑34 (MQ=255)
                                   ggCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAAGCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacatggcattgccagc                                                                                                                 >  1:1410790‑M1/1‑113 (MQ=255)
                                   ggCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcg                                                                                                                >  1:1410815‑M1/1‑113 (MQ=255)
                                        ccccACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcaca                                                                                                           >  2:1410873‑M1/1‑108 (MQ=255)
                                        ccccACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcaca                                                                                                           <  1:1410733‑M1/149‑42 (MQ=255)
                                         cccACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaa                                                                                                          <  2:1410734‑M1/149‑43 (MQ=255)
                                          ccACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaa                                                                                                         >  2:1410825‑M1/1‑106 (MQ=255)
                                          ccACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaa                                                                                                         <  1:1410738‑M1/149‑44 (MQ=255)
                                          ccACAAAATAACCGCCACCAGGAAAAAGAGCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaa                                                                                                         <  2:1410736‑M1/149‑44 (MQ=255)
                                           cacaAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATACTCtggttcccggaccggcagtacttggcattgccagcggcacaaag                                                                                                        <  2:1410740‑M1/149‑45 (MQ=255)
                                            acaAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaagg                                                                                                       <  2:1410742‑M1/149‑46 (MQ=255)
                                             caAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggc                                                                                                      <  2:1410743‑M1/149‑47 (MQ=255)
                                              aaaaTAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggca                                                                                                     >  2:1410859‑M1/1‑102 (MQ=255)
                                               aaaTAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaa                                                                                                    <  1:1410747‑M1/149‑49 (MQ=255)
                                                aaTAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaat                                                                                                   >  2:1410839‑M1/1‑100 (MQ=255)
                                                aaTAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaat                                                                                                   <  2:1410748‑M1/149‑50 (MQ=255)
                                                 aTAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaata                                                                                                  >  1:1410863‑M1/1‑99 (MQ=255)
                                                  tAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaata                                                                                                  <  1:1410750‑M1/148‑51 (MQ=255)
                                                     ccGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatatt                                                                                                <  1:1410752‑M1/147‑53 (MQ=255)
                                                      cGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAatc                                                                                                                                                    >  1:1410801/1‑94 (MQ=255)
                                                      cGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggc                                                                                             <  1:1410754‑M1/149‑56 (MQ=255)
                                                          accaGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactg                                                                                         >  2:1410831‑M1/1‑90 (MQ=255)
                                                           ccaGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgg                                                                                        <  2:1410756‑M1/149‑61 (MQ=255)
                                                           ccaGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgg                                                                                        >  2:1410827‑M1/1‑89 (MQ=255)
                                                             aGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggt                                                                                      >  1:1410809‑M1/1‑87 (MQ=255)
                                                              ggAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggtt                                                                                     >  2:1410811‑M1/1‑86 (MQ=255)
                                                               gAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttc                                                                                    <  2:1410758‑M1/149‑65 (MQ=255)
                                                               gAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttc                                                                                    <  2:1410759‑M1/149‑65 (MQ=255)
                                                                aaaaaGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttca                                                                                   <  2:1410761‑M1/149‑66 (MQ=255)
                                                                aaaaaGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttc                                                                                    <  1:4063308‑M1/148‑65 (MQ=255)
                                                                 aaaaGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggcccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcat                                                                                  >  1:1410777‑M1/1‑83 (MQ=255)
                                                                 aaaaGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcat                                                                                  >  2:1410807‑M1/1‑83 (MQ=255)
                                                                  aaaGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcacagggttaat                                                                                  >  1:1410884‑M1/1‑82 (MQ=255)
                                                                   aaGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatct                                                                                <  1:1410762‑M1/149‑69 (MQ=255)
                                                                    aGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatctt                                                                               >  1:1410874‑M1/1‑80 (MQ=255)
                                                                      aTCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAatc                                                                                                                                                    >  1:1410832/1‑78 (MQ=255)
                                                                       tCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggatcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttcca                                                                            >  2:1410861‑M1/1‑77 (MQ=255)
                                                                         aGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagc                                                                          <  2:1410764‑M1/149‑75 (MQ=255)
                                                                         aGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccag                                                                           >  1:1410824‑M1/1‑75 (MQ=255)
                                                                          gcggcggcgCAACCATCAGTACACAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcacggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagct                                                                         >  2:1410907‑M1/1‑74 (MQ=255)
                                                                               ggcgCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttcc                                                                    >  2:1410785‑M1/1‑69 (MQ=255)
                                                                                  gcAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgac                                                                 >  1:1410835‑M1/1‑66 (MQ=255)
                                                                                  gcAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccg                                                                   >  1:1410797‑M1/1‑66 (MQ=255)
                                                                                   cAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccg                                                                   <  1:1410768‑M1/146‑82 (MQ=255)
                                                                                    aaCCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagct                                                                         >  1:1410841‑M1/1‑64 (MQ=255)
                                                                                        aTCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgctt                                                           >  2:1410773‑M1/1‑60 (MQ=255)
                                                                                             tACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgc                                                      >  1:1410818‑M1/1‑55 (MQ=255)
                                                                                             tACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgc                                                      >  1:1410803‑M1/1‑55 (MQ=255)
                                                                                                 cAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctcc                                                  >  1:1410843‑M1/1‑51 (MQ=255)
                                                                                                  aaTCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttccctgaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgattttcgcctccg                                                 >  2:1410778‑M1/1‑50 (MQ=255)
                                                                                                  aaTCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccg                                                 >  1:1410866‑M1/1‑50 (MQ=255)
                                                                                                  aaTCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgctttt                                                         >  1:1410847‑M1/1‑50 (MQ=255)
                                                                                                        cGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattgtcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaat                                           >  1:1410792‑M1/1‑44 (MQ=255)
                                                                                                          aaGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatca                                         >  2:1410900‑M1/1‑42 (MQ=255)
                                                                                                             gTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatc                                      >  2:1410799‑M1/1‑39 (MQ=255)
                                                                                                                 aaCTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctt                                  >  2:1410886‑M1/1‑35 (MQ=255)
                                                                                                                  aCTCTGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctt                                  >  1:1410854‑M1/1‑34 (MQ=255)
                                                                                                                      tGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgt                             >  1:1410944‑M1/1‑30 (MQ=255)
                                                                                                                      tGACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgt                             >  1:1410787‑M1/1‑30 (MQ=255)
                                                                                                                       gACGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgtt                            >  2:1410842‑M1/1‑29 (MQ=255)
                                                                                                                        aCGCACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgttg                           >  2:1410914‑M1/1‑28 (MQ=255)
                                                                                                                           cACTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgttgcgg                        >  1:1410943‑M1/1‑25 (MQ=255)
                                                                                                                            aCTGTGGACGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgttgcgga                       >  1:1410870‑M1/1‑24 (MQ=255)
                                                                                                                                tgGACGCCGAGCTAATAATCtggtgcccggaccggcagtactttgcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttacgacttgcttttcgcctccggtgaatcaatcgctttctgttgcggaaaga                   <  2:1410770‑M1/149‑130 (MQ=255)
                                                                                                                                   aCGCCGAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcact                                                                                          <  1:1410771‑M1/75‑59 (MQ=255)
                                                                                                                                        gAGCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgtagcggaaagag                  >  1:1410910‑M1/1‑12 (MQ=255)
                                                                                                                                          gCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgttgcggaaagagcatccgaaa         >  2:1410846‑M1/1‑10 (MQ=255)
                                                                                                                                          gCTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgttgcggaaagagcatccgaaa         >  2:1410891‑M1/1‑10 (MQ=255)
                                                                                                                                           cTAATAATCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgttgcggaaagagcatccgaaaa        >  2:1410820‑M1/1‑9 (MQ=255)
                                                                                                                                            taataaTCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgttgcggaaagagcatccgaaaac       >  2:1410940‑M1/1‑8 (MQ=255)
                                                                                                                                            taataaTCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttcagacttgcttttcgcctc                                                   >  1:1410933‑M1/1‑8 (MQ=255)
                                                                                                                                              ataatCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgttgcggaaagagcatccgaaaaccg     >  2:1410872‑M1/1‑6 (MQ=255)
                                                                                                                                               taatCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgttgcggaaagagcatccgaaaaccga    >  1:1410895‑M1/1‑5 (MQ=255)
                                                                                                                                                 atCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgttgcggaaagagcatccgaaaaccgata  >  2:3505980‑M1/1‑3 (MQ=255)
                                                                                                                                                  tCtggttcccggaccggcagtacttggcattgccagcggcacaaaggcaatattggcactgggttcatcttccagctcttccgacttgcttttcgcctccggtgaatcaatcgctttctgttgcggaaagagcctccgaaaaccgata  >  1:1410916‑M1/1‑2 (MQ=255)
                                                                                                                                                   |                                                                                                                                                  
GCCCACCAGCCGCATAATTGCGCCGGAGCTGCGTAGGCTTCCCCACAAAATAACCGCCACCAGGAAAAAGATCAGCGGCGGCGCAACCATCAGTACCCAATCAGCGAAGGTTGAACTCTGACGCACTGTGGACGCCGAGCTAATAATCATCGCTATGGTTCCCGGACCGGCAGTACTTGGCATTGCCAGCGGCACAAAGGCAATATTGGCACTGGGTTCATCTTCCAGCTCTTCCGACTTGCTTTTCGCCTCCGGTGAATCAATCGCTTTCTGTTGCGGAAAGAGCATCCGAAA  >  U00096/1618351‑1618644

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑