New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	U00096	= 1287084	41 (0.160)	10 (0.050)	6/254	24.6	7.8%	noncoding (153/171 nt)	rttR	small RNA RttR
	?	U00096	= 4175537	201 (0.910)					noncoding (66/85 nt)	tyrU	tRNA‑Tyr
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  U00096/1286918‑1287084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggtgggggaaggattCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCG  <  U00096/4175537‑4175390                                                                                                                                                                                                                                                                                                                             CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAT                                                                                                                                                                        <  1:1070459/149‑1  GCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATG                                                                                                                                                                       <  2:1070461/149‑1     CTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTG                                                                                                                                                                    >  1:1070498/1‑149        CGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCTAGCCGAACCTTTGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTG                                                                                                                                                                    <  1:1070462/146‑1             TTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGTCGCTCTAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGA                                                                                                                                                            <  1:1070466/149‑1             TTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGCCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGaagagtg                                                                                                                                                            >  1:1070464/1‑142                 GGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGCTTGATAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGA                                                                                                                                                        >  2:1070577/1‑149                 GGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGA                                                                                                                                                        >  2:1070556/1‑149                  GTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGGTGGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAA                                                                                                                                                           >  2:1070562/1‑145                      TTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGt                                                                                                                                                   >  2:1070581/1‑148                        GCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGATTGATAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATaactga                                                                                                                                                 >  2:1070560/1‑143                         CCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAT                                                                                                                                                       >  2:1070559/1‑142                                        TCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGG                                                                                                                                                              >  1:1070473/1‑120                                            GCTGCCGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGTTGGGCAGTTCAGGGACTTTTGAAAGTGATGG                                                                                                                                                                      <  2:1070555/108‑1                                                  GCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAAAGTTCAGGGACTTTTGAAAGTGATGGTGGTG                                                                                                                                                                 >  2:1070573/1‑107                                                  GCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGATTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070616/1‑118                                                    TCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAT                                                                                                                                                       <  1:1070477/115‑1                                                    TCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGAT                                                                                                                                                       >  2:1070477/1‑115                                                            AACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070584/1‑108                                                                           TTCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTG                                                                                                                                                                 <  2:1070488/82‑1                                                                           TTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070610/1‑93                                                                           TTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGGTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070592/1‑93                                                                            TCTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGAT                                                                                                                                                                        <  2:1070474/74‑1                                                                             CTCATCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGATTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGA                                                                                                                                                            <  1:1070490/85‑1                                                                                 TCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATG                                                                                                                                                                       >  1:1070492/1‑70                                                                                 TCCTTCCCCGCTTGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATG                                                                                                                                                                       <  2:1070492/70‑1                                                                                 TCCTTCCCCGCATGGGCAGAATATTTTATTGCGGATTCGCTGGTTAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAA                                                                                                                                                  <  2:1070598/91‑1                                                                                 TCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAA                                                                                                                                                           >  1:1070594/1‑82                                                                                    TTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGGTTGAGAGTTCAGGGACTTTTGAAAGTGAT                                                                                                                                                                        >  2:1070600/1‑66                                                                                      CCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070599/1‑82                                                                                         CGCATGGGCAGAATATTTGATTGCGGATTCGCTTTAGAGTTCAGGGACTTTTGAAAGTGATG                                                                                                                                                                       <  1:1070497/62‑1                                                                                           CATGGGCAGAATATTTTATTGCGGATTCGCTGGTCAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAA                                                                                                                                          <  2:1070606/89‑1                                                                                                 CAGAATATTTGATTGCGGATTCGGTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTG                                                                                                                                                                 >  2:1070500/1‑60                                                                                                 CAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTG                                                                                                                                                                 <  1:1070500/60‑1                                                                                                   GAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATG                                                                                                                                                                       >  1:1070611/1‑52                                                                                                    AATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070502/1‑68                                                                                                    AATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGT                                                                                                                                                                     >  2:1070503/1‑53                                                                                                    AATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGT                                                                                                                                                                     <  1:1070503/53‑1                                                                                                     ATATTTTATTGCGGATTCGCTTGCTAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTCGAAG                                                                                                                                         <  2:1070617/80‑1                                                                                                      TATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070617/1‑66                                                                                                        TTTGATTGCGGATTCGCTTTAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070643/1‑64                                                                                                        TTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAA                                                                                                                                                  <  2:1070502/68‑1                                                                                                        TTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070614/1‑64                                                                                                        TTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070625/1‑64                                                                                                        TTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070618/1‑64                                                                                                              TGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCG                                                                                                                                                    >  2:1070510/1‑60                                                                                                              TGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCG                                                                                                                                                    <  1:1070510/60‑1                                                                                                                    TTCGCTTGAGATTTCAGGGACTTTTGAAAGTGATG                                                                                                                                                                       <  1:1070513/35‑1                                                                                                                       GCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070638/1‑49                                                                                                                       GCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070639/1‑49                                                                                                                       GCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070641/1‑49                                                                                                                       GCTTGAGAGTTCAGGGACTTTTGAAAGTGATAGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070644/1‑49                                                                                                                         TTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070640/1‑47                                                                                                                          TGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTC                                                                                                                                                     >  1:1070636/1‑47                                                                                                                           GAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070647/1‑45                                                                                                                                 TCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070731/1‑39                                                                                                                                 TCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT                                                                                                                                                      >  1:1070651/1‑39                                                                                                                                     GGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTC                                                                                                                                             <  1:1070657/44‑1                                                                                                                                     GGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATTCGAACCTTC                                                                                                                                             >  2:1070657/1‑44                                                                                                                                                       GTGGTGGGGGAATGATGCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTAC                  <  2:3634404/149‑1                                                                                                                                                       GTGGTGGGGGAAGGATTCGAACCTTCTAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTAC                  <  1:3634449/149‑1                                                                                                                                                       GTGGTGGGGGAAGGATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTAC                  <  2:3634518/149‑1                                                                                                                                                        TGGTGGGGGAAGGATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACC                 <  1:3634422/149‑1                                                                                                                                                        TGGTGGGGGAAGGATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACC                 <  2:3634460/149‑1                                                                                                                                                        TGGTGGGGGAAGGATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACC                 <  2:3634455/149‑1                                                                                                                                                         GGTGGGGGAAGGATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCT                >  1:3634333/1‑149                                                                                                                                                          GTGGGGGAAGGATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTA               <  1:3634523/149‑1                                                                                                                                                           TGGGGGAAGGATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTAC              <  2:3634508/149‑1                                                                                                                                                            GGGGGAAGGATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCAACGGACTTGATGGTGCCGGCTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCGACCTACT             >  2:3634332/1‑149                                                                                                                                                               GGAAGGATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAG          >  1:3634331/1‑149                                                                                                                                                                GAAGGATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAG          <  1:3634410/148‑1                                                                                                                                                                GAAGGATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTG            <  1:3634483/146‑1                                                                                                                                                                 AAGGATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCT        <  1:3634446/149‑1                                                                                                                                                                 AAGGATTCGAACCTTCGAAGTCTGTGACGGCAGAATTACCGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCT        <  2:3634329/149‑1                                                                                                                                                                  AGGATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTA       >  2:3634330/1‑149                                                                                                                                                                    GATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACT             <  1:3634520/141‑1                                                                                                                                                                     ATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTCCAAGTCAGTTGCTCTACCTACTGAGCTAAGT    <  2:3634403/149‑1                                                                                                                                                                     ATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGT    <  1:3634397/149‑1                                                                                                                                                                     ATTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTACCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGT    <  2:3634491/149‑1                                                                                                                                                                      TTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGCACTGGTGCCCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTC   >  2:3634327/1‑149                                                                                                                                                                      TTCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTC   >  1:3634328/1‑149                                                                                                                                                                      TTCGAACCTGCGAAGTCTGTGACGGCAGATTTACTGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGCTGGTGCCGACTACCGGAATCGAACTGGGGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTC   <  2:3634326/149‑1                                                                                                                                                                       TCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCG  <  2:3634470/149‑1                                                                                                                                                                       TCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCG  <  2:3634471/149‑1                                                                                                                                                                                                                                                                                                                             CGCGCTTCGCCCTTCGGGTCGTTGCCTGCGGCAACGCTCTCTCGCTGACGCTCGAGCCGAACCTTAGTCGAAGCTTCTCATCCTTCCCCGCATGGGCAGAATATTTGATTGCGGATTCGCTTGAGAGTTCAGGGACTTTTGAAAGTGATGGTGGTGGGGGAAGGATT‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  >  U00096/1286918‑1287084 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑tggtggtgggggaaggattCGAACCTTCGAAGTCTGTGACGGCAGATTTACAGTCTGCTCCCTTTGGCCGCTCGGGAACCCCACCGGACTTGATGGTGCCGACTACCGGAATCGAACTGGTGACCTACTGATTACAAGTCAGTTGCTCTACCTACTGAGCTAAGTCG  <  U00096/4175537‑4175390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.