New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? U00096 = 2560972107 (0.420)10 (0.050) 9/252 22.4 9.2% intergenic (+74/‑396) yffL/yffM uncharacterized protein YffL/uncharacterized protein YffM
?U00096 2561043 = 105 (0.480)intergenic (+145/‑325) yffL/yffM uncharacterized protein YffL/uncharacterized protein YffM
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 126 total aligned reads displayed.

TATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGTTTTTTAGCCTCCCGGTCGGTCATAGAGAGTCGCCTAG  >  U00096/2560827‑2561119
                                                                                                                                                 |                                                                                                                                                   
tatataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGtga                                                                                                                                                  >  2:2098181/1‑147 (MQ=255)
 atataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAg                                                                                                                                                 <  1:2098037/149‑1 (MQ=255)
 atataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAg                                                                                                                                                 <  1:2098036/149‑1 (MQ=255)
 atataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGGCAAAAGTTGCCGTTa                                                                                                                                                  >  1:2098175/1‑148 (MQ=255)
  tataCCAGGCTCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTaat                                                                                                                                                >  2:2098192/1‑147 (MQ=255)
  tataCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgt                                                                                                                                                <  1:2098039/149‑1 (MQ=255)
    taCCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtgg                                                                                                                                              >  1:2098107/1‑149 (MQ=255)
       cAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098114/1‑139 (MQ=255)
         ggATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTATTGGTGGGt                                                                                                                                         >  2:2098191/1‑149 (MQ=255)
          gATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTc                                                                                                                                        <  2:2098040/149‑1 (MQ=255)
          gATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTc                                                                                                                                        <  2:2098041/149‑1 (MQ=255)
             cGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCaaa                                                                                                                                     <  2:2098042/149‑1 (MQ=255)
              ggCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCaaaa                                                                                                                                    >  2:2098210/1‑149 (MQ=255)
               gCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAg                                                                                                                                   <  1:2098043/149‑1 (MQ=255)
                 aGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTTGTGTGGGGTCAAATGtt                                                                                                                                 >  2:2098198/1‑149 (MQ=255)
                 aGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCaaaa                                                                                                                                    <  1:2098045/146‑1 (MQ=255)
                 aGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGtt                                                                                                                                 <  2:2098046/149‑1 (MQ=255)
                  gAAAGGGAGTGCAACGAATACCAGGTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTg                                                                                                                                <  1:2098047/149‑1 (MQ=255)
                   aaaGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGc                                                                                                                               <  1:2098048/149‑1 (MQ=255)
                    aaGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098250/1‑126 (MQ=255)
                     aGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGGCAAAAGTTGCCg                                                                                                                             <  1:2098050/149‑1 (MQ=255)
                      gggAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGt                                                                                                                            <  2:2098051/149‑1 (MQ=255)
                       ggAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGtt                                                                                                                           <  2:2098053/149‑1 (MQ=255)
                       ggAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGtt                                                                                                                           <  2:2098052/149‑1 (MQ=255)
                        gAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTa                                                                                                                          <  2:2098055/149‑1 (MQ=255)
                         aGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCaaaa                                                                                                                                    <  1:2098057/138‑1 (MQ=255)
                         aGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTaa                                                                                                                         <  1:2098056/149‑1 (MQ=255)
                          gTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCTTTAAg                                                                                                                        >  2:2098246/1‑149 (MQ=255)
                           tGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAgg                                                                                                                       <  2:2098059/149‑1 (MQ=255)
                            gCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAATGTTGCCGTTAAgga                                                                                                                      >  2:2098234/1‑148 (MQ=255)
                            gCAACGAATACCAGTTATTATTCAAGCAGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTTGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGt                                                                                                                      <  2:3984643/149‑1 (MQ=255)
                             cAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098121/1‑117 (MQ=255)
                              aaCGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAAAGGTGGGTAATATTTTGCCGTAAAgg                                                                                                                       >  2:2098170/1‑146 (MQ=255)
                               aCGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTgg                                                                                                                    <  1:2098061/148‑1 (MQ=255)
                               aCGAATACCAGGTATTATTCAAGCCGTACAACCTGACATAACGGAATCCGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAACAGTTGCCGGTAGTGGTGGGGCAAAAGTCGCCGTTAAGGTggg                                                                                                                   <  2:2098060/149‑1 (MQ=255)
                                 gAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098108/1‑113 (MQ=255)
                                  aaTACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTa                                                                                                                                                  >  1:2098174/1‑115 (MQ=255)
                                      ccAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAg                                                                                                            <  2:2098064/149‑1 (MQ=255)
                                      ccAGTTATGATTCAAGCAGTACAACATGAAATCACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCATAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCaaaa                                                                                                             <  1:2098062/148‑1 (MQ=255)
                                       cAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTa                                                                                                                          >  2:2098063/1‑134 (MQ=255)
                                       cAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGt                                                                                                           >  2:2098243/1‑149 (MQ=255)
                                        aGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTCGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGtt                                                                                                          >  1:2098066/1‑149 (MQ=255)
                                        aGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTCGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGtt                                                                                                          >  1:2098065/1‑149 (MQ=255)
                                         gTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTg                                                                                                         >  2:2098230/1‑149 (MQ=255)
                                          ttattaTTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGCGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGc                                                                                                        <  1:2098068/149‑1 (MQ=255)
                                           tattatTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGcc                                                                                                       <  2:2098069/149‑1 (MQ=255)
                                             ttattCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098148/1‑101 (MQ=255)
                                               attCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAATTTGCCGTTAAGGTGGGTGAAATGTTGACGtgt                                                                                                   >  2:2098158/1‑147 (MQ=255)
                                                 tCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTACTGCTGGGTCAAAAGTAGCCGTAAAGGATGGTCAAAAGTTGCCggatac                                                                                                 >  2:2098211/1‑144 (MQ=255)
                                                  cAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098221/1‑96 (MQ=255)
                                                  cAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAgg                                                                                                <  2:2098070/149‑1 (MQ=255)
                                                  cAAGCAGTATACCATGAAATCTCGGTATCAGTCTGGCAATGTTCCATCCTTTTCTTTGCCATAAATACATGAATTCAGGTGGGTCAAATGTTGGCGTTATTGGTGCGTTAAAAGTTTCCTTTAAGGTGGGTCAAAAGTTGCCGTTAAgg                                                                                                <  2:2098081/149‑1 (MQ=19)
                                                    aGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTg                                                                                              <  2:2098072/149‑1 (MQ=255)
                                                     gcagTACAACATGAAATAACGGAATCAGTCGTGCAATGTTCCCGCCATTTCTTTGCCTTAAATCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCTTTAAGGTGGGGCAAAAGTTGCCGTTAAGGTgg                                                                                             <  2:2098073/146‑1 (MQ=38)
                                                     gCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098139/1‑93 (MQ=255)
                                                      ccGTACAACATGAAATAACGGAATCAGGCTGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTggg                                                                                            <  2:2098076/149‑1 (MQ=255)
                                                      ccGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGt                                                                                                                            <  1:2098077/117‑1 (MQ=255)
                                                       cGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCAGCCTTTTCTTTGCCTTAATTTAATGAATTCAGGTGGGTAAAAAGTTGCCGTTATTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGt                                                                                           <  2:2098078/149‑1 (MQ=38)
                                                            aacaTGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTGAAGGAGTGTCAAAAGTTTCAGTTAAGGGGGGTGaaaa                                                                                      >  2:2098228/1‑149 (MQ=39)
                                                             acaTGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098126/1‑85 (MQ=255)
                                                             acaTGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098239/1‑85 (MQ=255)
                                                              caTGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTTCCTTTATTCAATGAATTCAGGTGGGTCAAAAGTTGGCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGt                                                                                    <  1:2098080/149‑1 (MQ=255)
                                                                  aaaTAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTAAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCg                                                                                                                             >  1:2098242/1‑104 (MQ=255)
                                                                   aaTAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098160/1‑79 (MQ=255)
                                                                   aaTAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTAAAAATTTGCAGTTAAGGAGGGTCAAAATTTGACGTGAAGGGGGCTCTAATGtagact                                                                               >  2:2098249/1‑144 (MQ=255)
                                                                             tCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098276/1‑69 (MQ=255)
                                                                             tCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098116/1‑69 (MQ=255)
                                                                                 tacggCATTTTTCCAGCCTTTTGTTTTCCTTTTTTTAATGAATTCTGGTGGGACTAAAGTTGGCTTTATTGGTGGGTAATAAGTTGCCTTTTAGGTGGGTCAAAAGTTGCCTTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTctac                                                                 <  2:2098087/146‑1 (MQ=16)
                                                                                   gggCAATGTTCCCGCCTTTTCTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGAGGGTCAAAAGTTGCAGTTTAGGTGGCTCAAAATTTGACGAGTAAGTATTCTACAAt                                                              >  2:2098260/1‑149 (MQ=37)
                                                                                     gCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098132/1‑61 (MQ=255)
                                                                                       atttttCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGGGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTaa                                                           <  2:2098082/145‑1 (MQ=255)
                                                                                        aTGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAgtg                                                                                                                                               >  1:2098206/1‑64 (MQ=255)
                                                                                         tGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTATTGGTGGGTCAAAATTTGCCTTTAAGGAGGGTCAAAAGTTGCCGTTAAGGTGTCTCAAAATTTGCCGAGTAAGAATTCTACAATTa                                                            >  1:2098220/1‑146 (MQ=37)
                                                                                               cGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCAGTTAAGGTGGGTCAAAATTTGCCGAGTAAGAATTATACAATTAAGAATtata                                                   >  2:2098294/1‑149 (MQ=37)
                                                                                                gCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTAAAGGTGGGGCAAAAGTTGACGAGTAAGGATGCGACAATTATAAATTCTAg                                                  >  1:2098083/1‑149 (MQ=37)
                                                                                                 ccTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGAAGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAgg                                                 <  1:2098085/149‑1 (MQ=255)
                                                                                                   ttttCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098173/1‑47 (MQ=255)
                                                                                                   atacgttttCCTTTATTCCATGAATTCTGTTGGGTCAAAAGCACCCCTTACTGGGGGGTAAAATGTTGCCTTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCg                                               <  2:2098098/144‑1 (MQ=25)
                                                                                                    tttCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTa                                                                                                                                                  >  1:2098149/1‑49 (MQ=255)
                                                                                                    tttCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGAGGGTCAAAATTTTAAGTGAAGGTGGCTGTAATTTTGACTAGTAAGGAGTGTACAATTAAGATTTCTTGGCgt                                              >  2:2098209/1‑148 (MQ=16)
                                                                                                      tCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCAGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCg                                               >  1:2098312/1‑146 (MQ=255)
                                                                                                       cTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGCATTCTACAATTAAGAATTCTAGGCGACgg                                           >  1:2098275/1‑149 (MQ=255)
                                                                                                        ttttCCATAAATTCATGAATTCTGTTTGGTTAAAATTAGGCTTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACggg                                          <  2:2098090/149‑1 (MQ=21)
                                                                                                        tttGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCg                                                                                                                                                     >  1:2098186/1‑42 (MQ=255)
                                                                                                         ttGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTAAAAAGTTGCCTTTAAGGAGGGTCAAAATTTGAAGAAAAGGGGTCGGAAAATTTGACTAGTAAGGATTGTAAAATTATGAATAGTAGGCGGCGTGa                                         >  2:2098216/1‑149 (MQ=12)
                                                                                                           gCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGAGGGTCAAATGTTGCCGTTAAGGTGGGGCTAAATTTGAGGAGTAAGAATTCTACAATTAAGAATTCTAGGCGACGGGAGt                                       >  1:2098144/1‑149 (MQ=37)
                                                                                                            ccatAAATCAATGAATTCAGGGGGGTCTAAAGATGCCCTTACTGGGGGGTCAAAACCCGCCGTTACGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGtt                                      <  1:2098088/146‑1 (MQ=25)
                                                                                                             cTTAATTCAATGAATTCAGGGGGCTCAAAATTTGCCTTTTTTGTTGGGTCAAAACTTGCCTTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGttt                                     <  2:2098086/149‑1 (MQ=37)
                                                                                                              ttAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAATTTTGCCTTAAAGGAGGGTCAAAATTTGAAGTTTAGGTGGGTGAAAAGTTGACGAGAAAGAATACTACAATTAAGAATTATAGGCCACGGGatatta                                    >  2:2098251/1‑144 (MQ=25)
                                                                                                               ttaTTCCATGACTTTATGTGTCTCATAAGCTGTACTTAGTTGTGGGTAATATGTTGCCTTTTAGTTGGGTCAATAGTTGCAGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGttttt                                   <  2:2098138/147‑1 (MQ=255)
                                                                                                                aaTTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGGCGGTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTGTACTATTATGAATTCTAGGCGACGGGAGtttttt                                  >  1:2098271/1‑149 (MQ=255)
                                                                                                                     cATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGc                                                                                                                               >  1:2098232/1‑51 (MQ=255)
                                                                                                                     cATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTATGAATTCTAGGCGACGGGAGTTTTTTAGCCt                             >  1:2098292/1‑149 (MQ=255)
                                                                                                                        gAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTAAAAATTTGCCTTTAAGGAGTGTCAAAATTTGACGTAAAGGTGTCGGAAAATTAGCCGAGTAAGAATTCTACAATTAAGATTTCTAGGCGACGTGATTTTTTTAgagtaag                          >  2:2098273/1‑143 (MQ=19)
                                                                                                                          aTTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAATTTGCATTTAAGGAGGGTCAAAATTTGCAGTAAAGGTGTCTGAAAATTTGACGAGAAAGAAGTCTAAAATTAACAATAATAGGCGTCGGGAGTTTTTTAGACtaaccg                        >  2:2098283/1‑144 (MQ=16)
                                                                                                                           ttCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTg                                                                                                         >  1:2098311/1‑67 (MQ=255)
                                                                                                                                       aaaaGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGGGGGTCAAAAGTTGGCGAGAAGGTGGGTCAAACGTTGGCGAGAAAGAATTCTACAATTAAGAATTCAAGGCGACTGGAGGTTTTTAGCCTACCGGTCGGTCATag              >  2:2098300/1‑146 (MQ=25)
                                                                                                                                          aGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGGCAAAAGTTTCCGAGTAAGCAGTCTCCAATTTAGAATACTAGGCGACGGGAGTTTATTAGCATAGCGGGCGGTCATagagaggc        >  2:2098237/1‑147 (MQ=25)
                                                                                                                                             tGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGTTTTTTAGCCTCCCGGTCGGTCATagagag          >  1:2098270/1‑144 (MQ=255)
                                                                                                                                               ccGTTAGTGGTGGGTCAAAAGTTGCCGTTTAGGTGGGGGAAAAGTTGCAGTTAATGTCGGACAGAAGTTTGAGGGTTAGAATTCTAGAATTTAGAATAGTAGGCGAATGGAGTTTTTAATAATAACGGGGGGTGATAGAGAGTctcgtt   >  2:2098256/1‑144 (MQ=255)
                                                                                                                                                 |                                                                                                                                                   
TATATACCAGGATCGGCAGAAAGGGAGTGCAACGAATACCAGTTATTATTCAAGCCGTACAACATGAAATAACGGAATCAGGCGGGCAATGTTCCCGCCTTTTCTTTGCCTTAATTCCATGAATTCAGGTGGGTCAAAAGTTGCCGTTAGTGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGTTAAGGTGGGTCAAAAGTTGCCGAGTAAGAATTCTACTATTAAGAATTCTAGGCGACGGGAGTTTTTTAGCCTCCCGGTCGGTCATAGAGAGTCGCCTAG  >  U00096/2560827‑2561119

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.