Predicted mutation
evidence seq id position mutation annotation gene description
MC JC U00096 1,397,381 Δ13,756 bp [ynaJ][ttcA] 17 genes

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ U00096 1397381 1411136 13756 253 [0] [0] 253 [ynaJ]–[ttcA] [ynaJ],uspE,fnr,ogt,abgT,abgB,abgA,abgR,mcaS,smrA,dgcM,ynaN,zntB,fnrS,ynaL,dbpA,[ttcA]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? U00096 = 13973800 (0.000)253 (1.010) 167/290 0.1 100% coding (16/258 nt) ynaJ DUF2534 domain‑containing protein YnaJ
?U00096 1411137 = 0 (0.000)coding (812/936 nt) ttcA tRNA cytosine(32) 2‑sulfurtransferase TtcA

Only 100 of 253 total aligned reads displayed.

TCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGTTATAGAACAGTACAATATTCCGCTGTCTGAGTGGACGACATCAATGTATGTGA  >  U00096/1397236‑1397527
                                                                                                                                                |                                                                                                                                                   
tCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTTAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACactt                                                                                                                                                 <  1:1157609‑M1/149‑5 (MQ=255)
tCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACactt                                                                                                                                                 <  2:1157610‑M1/149‑5 (MQ=255)
tCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACactt                                                                                                                                                 >  1:1157793‑M1/1‑145 (MQ=255)
   ctaactaaTCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcag                                                                                                                                              <  1:1157612‑M1/149‑8 (MQ=255)
    taactaaTCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACactt                                                                                                                                                 >  1:1157687‑M1/1‑141 (MQ=255)
     aactaaTCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaa                                                                                                                                            <  2:1157618‑M1/149‑10 (MQ=255)
      actaaTCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaac                                                                                                                                           <  2:1157620‑M1/149‑11 (MQ=255)
       ctacTCAATGCGTTGAGTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGCAACacttcagaacc                                                                                                                                          >  2:1157765‑M1/1‑138 (MQ=255)
       ctaaTCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaacc                                                                                                                                          >  1:1157680‑M1/1‑138 (MQ=255)
         aaTCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgt                                                                                                                                        <  1:1157624‑M1/149‑14 (MQ=255)
           tCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgg                                                                                                                                      <  2:1157626‑M1/149‑16 (MQ=255)
             aaTGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggt                                                                                                                                    <  1:1157630‑M1/149‑18 (MQ=255)
             aaTGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggt                                                                                                                                    <  2:1157629‑M1/149‑18 (MQ=255)
               tGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtga                                                                                                                                  >  1:1157718‑M1/1‑130 (MQ=255)
               tGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtga                                                                                                                                  <  1:1157633‑M1/149‑20 (MQ=255)
                   ttGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcc                                                                                                                              >  2:1157725‑M1/1‑126 (MQ=255)
                   ttGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTGTAGGTAACAAGCAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagcaccgtgggtgaggcc                                                                                                                              >  1:1157790‑M1/1‑126 (MQ=255)
                    tGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcct                                                                                                                             >  2:1157782‑M1/1‑125 (MQ=255)
                     gATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctt                                                                                                                            >  2:1157684‑M1/1‑124 (MQ=255)
                      aTTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgccttt                                                                                                                           <  2:1157638‑M1/149‑27 (MQ=255)
                      aTTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgccttt                                                                                                                           <  1:1157635‑M1/149‑27 (MQ=255)
                       ttGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggagatgcctatg                                                                                                                          >  2:1157777‑M1/1‑122 (MQ=255)
                           aaaTCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaat                                                                                                                      <  1:1157642‑M1/149‑32 (MQ=255)
                            aaTCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatt                                                                                                                     >  1:2603146‑M1/1‑117 (MQ=255)
                            aaTCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatc                                                                                                                     >  1:1157700‑M1/1‑117 (MQ=255)
                            aaTCCAGCTAAGAGGTGAGGTGTGCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatc                                                                                                                     <  2:1157643‑M1/149‑33 (MQ=255)
                             aTCCAGCTAAGAGGTGAGGATTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttaagaaccgtgggtgatgcctttgaaatcg                                                                                                                    >  2:1157770‑M1/1‑116 (MQ=255)
                              tCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAATTGTCATGGTATTGTTACGTTTAGGTAACAAGAATTTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgt                                                                                                                   <  1:1157645‑M1/149‑35 (MQ=255)
                                  gCTAAGAGGTGAGGTTTCCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacag                                                                                                               >  2:1157722‑M1/1‑111 (MQ=255)
                                  gCTAAGAGGTGAGCATTTCAGAGCAGACAACCGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAACAAAAAACACTGCACAAGGAATACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacag                                                                                                               >  2:1157812‑M1/1‑111 (MQ=255)
                                    tAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggt                                                                                                             <  2:1157650‑M1/149‑41 (MQ=255)
                                     aaGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaaacg                                                                                                                    >  1:1157771‑M1/1‑108 (MQ=255)
                                      agagGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttg                                                                                                           <  2:1157652‑M1/149‑43 (MQ=255)
                                       gaggtgaggtTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttgg                                                                                                          <  1:1157653‑M1/149‑44 (MQ=255)
                                         ggtgaggtTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggta                                                                                                        >  1:1157711‑M1/1‑104 (MQ=255)
                                          gtgaggtTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtat                                                                                                       >  1:1157784‑M1/1‑103 (MQ=255)
                                            gaggtTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcg                                                                                                     >  2:1157741‑M1/1‑101 (MQ=255)
                                               gtTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgctc                                                                                                  >  2:1157657‑M1/1‑98 (MQ=255)
                                               gtTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcac                                                                                                  >  2:1157719‑M1/1‑98 (MQ=255)
                                               gtTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggtt                                                                                                            <  1:1157658‑M1/139‑42 (MQ=255)
                                                   tCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgagatcgaacaggttggtatcgcacagat                                                                                              <  2:1157661‑M1/149‑56 (MQ=255)
                                                       agCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcga                                                                                          <  1:1157664‑M1/149‑60 (MQ=255)
                                                         cAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacg                                                                                        <  2:1157667‑M1/149‑62 (MQ=255)
                                                          aGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacgg                                                                                       >  2:3025821‑M1/1‑87 (MQ=255)
                                                           gACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggc                                                                                      <  1:1157669‑M1/149‑64 (MQ=255)
                                                              aaCGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcacc                                                                                   >  2:1157809‑M1/1‑83 (MQ=255)
                                                              aaCGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcacc                                                                                   >  2:1157757‑M1/1‑83 (MQ=255)
                                                                  gTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacat                                                                               >  2:1157845‑M1/1‑79 (MQ=255)
                                                                   tGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacatt                                                                              >  1:1157691‑M1/1‑78 (MQ=255)
                                                                    gAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattc                                                                             >  2:1157731‑M1/1‑77 (MQ=255)
                                                                     aaaTGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattct                                                                            >  2:1157762‑M1/1‑76 (MQ=255)
                                                                      aaTGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctg                                                                           >  2:1157672‑M1/1‑75 (MQ=255)
                                                                      aaTGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctg                                                                           >  2:1157834‑M1/1‑75 (MQ=255)
                                                                          tCATGGTATTGTTACGTTTCGGGAACAAGAAATTTGGATGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtctcgcacagatgcgacggcaccacattctgcatc                                                                       <  2:1157686‑M1/149‑79 (MQ=255)
                                                                          tCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatc                                                                       <  2:1157679‑M1/149‑79 (MQ=255)
                                                                          tCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatc                                                                       <  1:1157693‑M1/149‑79 (MQ=255)
                                                                           cATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcg                                                                      >  2:1157753‑M1/1‑70 (MQ=255)
                                                                            aTGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcat                                                                        >  1:1157763‑M1/1‑69 (MQ=255)
                                                                              ggTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgc                                                                   >  2:1157748‑M1/1‑67 (MQ=255)
                                                                              ggTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgc                                                                   >  2:1157739‑M1/1‑67 (MQ=255)
                                                                                    gTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacgtcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgacca                                                             >  1:1157802‑M1/1‑61 (MQ=255)
                                                                                     ttACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacat                                                            >  1:1157752‑M1/1‑60 (MQ=255)
                                                                                      tACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatc                                                           >  1:1157733‑M1/1‑59 (MQ=255)
                                                                                       aCGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatc                                                           >  1:2937601‑M1/1‑58 (MQ=255)
                                                                                        cGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgt                                                         <  2:1157704‑M1/149‑93 (MQ=255)
                                                                                          tttAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtct                                                       >  1:1157747‑M1/1‑55 (MQ=255)
                                                                                           ttAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctc                                                      >  1:1157786‑M1/1‑54 (MQ=255)
                                                                                               gTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgata                                                  >  2:1157887‑M1/1‑50 (MQ=255)
                                                                                                tAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACa                                                                                                                                                    >  1:1157738‑M1/1‑49 (MQ=255)
                                                                                                 aaCAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacg                                                <  1:1157674‑M1/149‑102 (MQ=255)
                                                                                                     aGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccct                                            >  1:1157806‑M1/1‑44 (MQ=255)
                                                                                                     aGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccct                                            <  2:1157695‑M1/149‑106 (MQ=255)
                                                                                                      gAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctg                                           <  2:1157702‑M1/149‑107 (MQ=255)
                                                                                                        aaTTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctgg                                          <  1:1157707‑M1/148‑108 (MQ=255)
                                                                                                         aTTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggat                                        <  1:1157725‑M1/149‑110 (MQ=255)
                                                                                                            tGTCTGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataac                                     >  1:1157848‑M1/1‑37 (MQ=255)
                                                                                                                tGCACAAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgttt                                 <  1:1157715‑M1/149‑117 (MQ=255)
                                                                                                                   acaAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatc                              >  2:1157801‑M1/1‑30 (MQ=255)
                                                                                                                    caAGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcc                             >  1:1157817‑M1/1‑29 (MQ=255)
                                                                                                                     aaGGATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatccc                            >  1:1157833‑M1/1‑28 (MQ=255)
                                                                                                                       ggATTACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatc                              >  1:1157840‑M1/1‑26 (MQ=255)
                                                                                                                          ttACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtca                       <  2:1157714‑M1/149‑127 (MQ=255)
                                                                                                                          ttACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtca                       >  2:1157789‑M1/1‑23 (MQ=255)
                                                                                                                          ttACATCATGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtc                        <  1:1157682‑M1/148‑126 (MQ=255)
                                                                                                                               tcatGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaa                  >  2:1157795‑M1/1‑18 (MQ=255)
                                                                                                                                 atGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaaca                <  2:1157716‑M1/149‑134 (MQ=255)
                                                                                                                                 atGATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaaca                >  1:1157774‑M1/1‑16 (MQ=255)
                                                                                                                                   gATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaacatg              <  1:1157698‑M1/149‑136 (MQ=255)
                                                                                                                                   gATTATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaacatg              >  1:1157871‑M1/1‑14 (MQ=255)
                                                                                                                                     ttATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaacatgtc            <  2:1157710‑M1/149‑138 (MQ=255)
                                                                                                                                     ttATGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtcgcgatacgccctggataacgtttatcccagtcacgcaacatgtc            <  2:1157691‑M1/149‑138 (MQ=255)
                                                                                                                                       aTGGCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaacatgtcag          >  1:1157863‑M1/1‑10 (MQ=255)
                                                                                                                                         ggCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaacatgtcagca        <  1:1157722‑M1/149‑142 (MQ=255)
                                                                                                                                         ggCGAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaacatgtcagca        <  2:1157681‑M1/149‑142 (MQ=255)
                                                                                                                                            gAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaacatgtcagcaatc     <  2:1157708‑M1/149‑145 (MQ=255)
                                                                                                                                            gAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaacatgtcagcaatc     <  2:1157699‑M1/149‑145 (MQ=255)
                                                                                                                                            gAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaacatgtcagcaatc     >  2:1157889‑M1/1‑5 (MQ=255)
                                                                                                                                            gAAACacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaacatgtcagcaat      >  1:1157819‑M1/1‑5 (MQ=255)
                                                                                                                                             aaaCacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcacagtcacgcaacatgtcagcaatc     >  1:1157929‑M1/1‑4 (MQ=255)
                                                                                                                                               acacttcagaaccgtgggtgatgcctttgaaatcgaacaggttggtatcgcacagatgcgacggcaccacattctgcatcgcgctgaacatcgtctcgatacgccctggataacgtttatcccagtcacgcaacatgtcagcaatcacc  <  1:1157672‑M1/149‑148 (MQ=255)
                                                                                                                                                |                                                                                                                                                   
TCCCTAACTAATCAATGCGTTGATTGTAAATCCAGCTAAGAGGTGAGGTTTTCAGAGCAGACAACGGTGAAATGTCATGGTATTGTTACGTTTAGGTAACAAGAAATTTGTCTGCACAAGGATTACATCATGATTATGGCGAAACTGAAGTCAGCGAAAGGGAAGAAATTTCTCTTTGGTTTGTTGGCGGTTTTCATTATTGCGGCGTCGGTTGTGACTCGCGCGACCATCGGCGGCGTTATAGAACAGTACAATATTCCGCTGTCTGAGTGGACGACATCAATGTATGTGA  >  U00096/1397236‑1397527

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: