Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
JC JC	U00096	2,143,211	IS5 (–) +4 bp	intergenic (‑263/‑52)	udk ← / → dgcE	uridine/cytidine kinase/putative diguanylate cyclase DgcE

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	U00096	1427599 =	NA (NA)	78 (0.660)	63/288	1.5	100%	noncoding (1196/1196 nt)	IS5	repeat region
	?	U00096	= 2143214	0 (0.000)					intergenic (‑266/‑52)	udk/dgcE	uridine/cytidine kinase/putative diguanylate cyclase DgcE
*	?	U00096	= 1428794	NA (NA)	98 (0.820)	78/290	0.7	100%	noncoding (1/1196 nt)	IS5	repeat region
	?	U00096	2143211 =	0 (0.000)					intergenic (‑263/‑55)	udk/dgcE	uridine/cytidine kinase/putative diguanylate cyclase DgcE

AACCGGAAATAACGCCAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCct‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  U00096/1427744‑1427599 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTAACTC  <  U00096/2143214‑2143065                                                                                                                                                                                                                                                                                                          AACCGGAAATAACGCCAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTA                                                                                                                                                     <  1:549972/149‑1   CCGGAAATAACGCCAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAG                                                                                                                                                    <  1:549988/148‑1     GGAAATAACGCCAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTAC                                                                                                                                                 >  2:826991/1‑149                CAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTAC                                                                                                                                      >  2:826998/1‑149                  GAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACAT                                                                                                                                    >  2:826992/1‑149                  GAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACA                                                                                                                                     >  1:826971/1‑148                   AAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATT                                                                                                                                   <  1:549999/149‑1                   AAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGGTTTACATT                                                                                                                                   >  1:826996/1‑149                            AAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATAT                                                                                                                             <  1:550018/146‑1                             AAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGA                                                                                                                         >  2:827000/1‑149                             AAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGA                                                                                                                         <  2:549990/149‑1                               AAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGAGCCGCGAAATTTTCATCAGCGAGTCAGCGTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAAT                                                                                                                       <  2:550006/149‑1                                AATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATT                                                                                                                      >  2:826956/1‑149                                    GCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTC                                                                                                                  <  2:550008/149‑1                                      CTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCAT                                                                                                                >  1:827013/1‑149                                       TAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATA                                                                                                               >  1:827016/1‑149                                       TAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATA                                                                                                               >  1:826963/1‑149                                         AATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAA                                                                                                             >  1:549961/1‑149                                          ATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAG                                                                                                            <  2:550094/149‑1                                          ATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAG                                                                                                            >  1:826969/1‑149                                          ATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTGTACATTTTATATGCGAATTGCTCATAAAG                                                                                                            >  2:826958/1‑149                                           TAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGT                                                                                                           >  2:840463/1‑149                                             GGCTGATTCGATGTGTTTGAGGGAAAAAAATATGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGAAAGAAAAGACCTGCTTATTCGCACCTTCCCTAGTAAAAAAGATTTACATTTAATATTCGAATTGATCATAAATTGA                                                                                                         >  2:826935/1‑149                                                TGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGT                                                                                                      <  1:549996/149‑1                                                    TCGATGGGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAG                                                                                                  <  2:549973/149‑1                                                      GATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGC                                                                                                >  2:826953/1‑149                                                      GATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGC                                                                                                >  1:826989/1‑149                                                         GTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGAGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATATAGTGACGTAAAGGCGGA                                                                                             <  2:549981/149‑1                                                          TGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGAT                                                                                            <  2:549961/149‑1                                                               GCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTT                                                                                       <  2:549968/149‑1                                                               GCGGGAAAAAAATCGGCCCAGATCCGCGAAATTATAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTAGCACCTTCCCTAGTACAATAGTTTTACATTTTATAAGCGTATTGCTCATACAGTGACGTAAAGGCGGATAATTT                                                                                       <  2:550011/149‑1                                                                  GGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTT                                                                                       <  1:549967/146‑1                                                                   GAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGC                                                                                     <  1:550009/147‑1                                                                    AAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGA                                                                                                         <  1:550024/126‑1                                                                     AAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCA                                                                                  >  1:826962/1‑148                                                                     AAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCA                                                                                  >  1:826975/1‑148                                                                       AAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACT                                                                               <  2:827030/149‑1                                                                          ATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCG                                                                            >  2:827029/1‑149                                                                            CGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTT                                                                          <  1:827028/149‑1                                                                              GCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTA                                                                        <  2:827027/149‑1                                                                                      CCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTT                                                                <  2:827025/149‑1                                                                                        GCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTT                                                               >  1:827026/1‑148                                                                                            AATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGTATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTT                                                          <  1:827023/149‑1                                                                                            AATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTT                                                          >  2:827024/1‑149                                                                                                TTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACAT                                                      >  2:827022/1‑149                                                                                                    TCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAA                                                  >  1:827021/1‑149                                                                                                     CAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAAC                                                 <  1:827020/149‑1                                                                                                       GCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTG                                               <  2:827018/149‑1                                                                                                          AGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATC                                            <  2:827016/149‑1                                                                                                           GTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCA                                           >  2:827017/1‑149                                                                                                            TCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAA                                          >  1:1821835/1‑149                                                                                                               GCTTTGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGGAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACtt                                       >  2:827014/1‑147                                                                                                               GCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGT                                       <  2:827013/149‑1                                                                                                                  TGGGAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAAT                                    >  2:827012/1‑149                                                                                                                     GAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTG                                 >  1:827010/1‑149                                                                                                                     GAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTG                                 >  2:827009/1‑149                                                                                                                     GAAGAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTG                                 >  2:827008/1‑149                                                                                                                        GAAATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCC                              >  1:827007/1‑149                                                                                                                           ATGACCTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCG                           >  2:827006/1‑149                                                                                                                                CTGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAAT                      >  2:827004/1‑149                                                                                                                                 TGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATT                     >  2:827002/1‑149                                                                                                                                 TGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATT                     >  2:827003/1‑149                                                                                                                                 TGCTTATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATT                     <  1:827000/149‑1                                                                                                                                     TATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTT                 >  2:826999/1‑149                                                                                                                                     TATTCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTT                 <  1:826998/149‑1                                                                                                                                        TCGCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTC              >  2:826997/1‑149                                                                                                                                        TCGCACCTTCCCTAGTACAAAAGCTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTC              <  2:826996/149‑1                                                                                                                                          GCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAAC                                         <  1:827015/120‑1                                                                                                                                          GCACCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAAC                                         >  2:827015/1‑120                                                                                                                                             CCTTCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAA         >  1:826994/1‑149                                                                                                                                                TCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTA      <  1:827002/149‑1                                                                                                                                                TCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTA      <  2:826990/149‑1                                                                                                                                                TCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTA      <  1:826991/149‑1                                                                                                                                                TCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTA      <  1:826992/149‑1                                                                                                                                                TCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTA      <  1:827029/149‑1                                                                                                                                                TCCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTA      <  1:827003/149‑1                                                                                                                                                 CCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTAA     <  2:826989/149‑1                                                                                                                                                 CCCTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTAA     >  1:826993/1‑149                                                                                                                                                    TAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTAACTC  >  2:826988/1‑149                                                                                                                                                                                                                                                                                                          AACCGGAAATAACGCCAGAAATGGTGGAAAAAATAGCCTAAATAGGCTGATTCGATGTGTTTGCGGGAAAAAAATCGGCCCAGATCCGCGAAATTTTAATCAGCGAGTCAGCTTGGGAAGAAATGACCTGCTTATTCGCACCTTCCct‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑  <  U00096/1427744‑1427599 ‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑‑CTAGTACAAAAGTTTTACATTTTATATGCGAATTGCTCATAAAGTGACGTAAAGGCGGATAATTTGCGCAACTGCGTTTAACATTTTTTACCTTACATAAAACTGATCAACGTAATTTGCCCCCGGGAATTCTTTGTCAACAATTAACTC  <  U00096/2143214‑2143065

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.