BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	U00096	781369 =	133 (0.530)	69 (0.280) +G	17/290	22.8	42.2%	noncoding (1/76 nt)	lysZ	tRNA‑Lys
*	?	U00096	= 2521129	57 (0.230)	69 (0.280) +G	17/290	22.8	42.2%	intergenic (+3/‑44)	valX/valY	tRNA‑Val/tRNA‑Val
Rejected: Coverage evenness skew score above cutoff.

Only 100 of 139 total aligned reads displayed.

CAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGA  >  U00096/781221‑781516

caGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATg                                                                                                                                                     <  2:649113/149‑1 (MQ=255)

caGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGACACGAGTAAAAATCTTTCAGGTAACAACCGTATg                                                                                                                                                     >  2:649293/1‑149 (MQ=255)

 aGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATACTGCACGACCCACCAATATGAAAGATTGGACCCGAGTAAAAATCTTTCAGGTATCTCCCGTATgg                                                                                                                                                    >  2:649286/1‑149 (MQ=21)

  gTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATggg                                                                                                                                                   >  2:649158/1‑149 (MQ=255)

  gTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATggg                                                                                                                                                   >  1:649151/1‑149 (MQ=255)

   ttttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGt                                                                                                                                                  <  1:649114/149‑1 (MQ=255)

   ttttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGt                                                                                                                                                  >  2:649163/1‑149 (MQ=255)

   ttttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGAGTGGACCCGAGTAAAACTCTTTCAGGTTACACCCGTATGGGt                                                                                                                                                  >  2:649256/1‑149 (MQ=255)

    tttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                                                                                                                                                 <  1:649115/149‑1 (MQ=255)

    tttAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTc                                                                                                                                                 <  2:649117/149‑1 (MQ=255)

      tAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGAGTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCg                                                                                                                                                >  1:649162/1‑148 (MQ=255)

       aaCATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCACGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGtt                                                                                                                                              >  2:649161/1‑149 (MQ=255)

        aCATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTa                                                                                                                                             <  2:649119/149‑1 (MQ=255)

         cATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAg                                                                                                                                            <  2:649121/149‑1 (MQ=255)

         cATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAg                                                                                                                                            <  1:649122/149‑1 (MQ=255)

         cATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAg                                                                                                                                            >  1:649156/1‑149 (MQ=255)

          aTCAAACTCAGATGTTAAGCGTGAAGGATACCGTTGCGCCAGCACCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAAACTTTCAGGTAACACCCGTATGGGTCGTTAg                                                                                                                                            >  1:1463407/1‑148 (MQ=255)

          aTCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAAACTTAAAGATTGTCCCCGAGTAAAAAACATACAGGTAACACCCGTATGGGTCGTTAGc                                                                                                                                           >  2:649336/1‑149 (MQ=25)

           tCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCACGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCt                                                                                                                                          >  2:649167/1‑149 (MQ=255)

             aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                                        <  2:649124/149‑1 (MQ=255)

             aaaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCa                                                                                                                                        <  1:649123/149‑1 (MQ=255)

              aaCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAg                                                                                                                                       <  2:649125/149‑1 (MQ=255)

               aCTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGt                                                                                                                                      <  2:1422782/149‑1 (MQ=255)

                cTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGTCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCTAGTAAAAATCTTTCATTTAACACCCGTATGGGTCGTTAGCTCAGtt                                                                                                                                     <  1:649127/149‑1 (MQ=255)

                  cAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCGTTCAGGTAACAACCGTATGGGTCGTTAGCTCAGTTgg                                                                                                                                   >  1:649289/1‑149 (MQ=255)

                  cAGATGTTAAGCGTGAAGGATAACGTTGCGCCACCAACGGCCCGTAGGGCGAGCGAAGCTAGTCAGCCTGCACGACCCACCAATCTTAACGATTGGCCCCGAGTAAAAATCTTTCATGTAACACCCGTATGGGTCGTTAGCTCAGTTgg                                                                                                                                   <  2:649129/149‑1 (MQ=25)

                      tGTTAAGCGTGAAGGATAACGTTGCGCCAGAAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTaga                                                                                                                               <  2:649130/149‑1 (MQ=255)

                        ttAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAAAATAAAAGATTAACCCAGAGTAAAAGAGATGAAGATAACCGCCTAATGGGTCGGTAGCTCAGTAGGttgtgc                                                                                                                             >  2:649308/1‑144 (MQ=9)

                           aGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGt                                                                                                                          <  2:649135/149‑1 (MQ=255)

                              gTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGa                                                                                                                       <  1:649137/149‑1 (MQ=255)

                              gTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAAACTGAAAGATTGGCCCCGAGTAAACAGCGTACAGGTAGCTAGCGGAGGGGTCGTTCGCAAACGTGGTAGAGAAGATGa                                                                                                                       >  2:649307/1‑149 (MQ=17)

                                  aGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACttt                                                                                                                   <  2:649138/149‑1 (MQ=255)

                                   ggATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAAACTTAAAGATTGGCCCCGAGTAAAAATCATTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGAAGTTGACtttt                                                                                                                  >  2:649352/1‑149 (MQ=255)

                                      tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                               >  2:649160/1‑149 (MQ=255)

                                      tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                               >  1:649150/1‑149 (MQ=255)

                                      tAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAAt                                                                                                               >  1:649149/1‑149 (MQ=255)

                                        aCGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCa                                                                                                             <  1:649142/149‑1 (MQ=255)

                                           gtGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGGCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAtt                                                                                                          <  2:649144/148‑1 (MQ=255)

                                              cgcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGa                                                                                                                       >  1:649175/1‑133 (MQ=255)

                                               gcCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGAGTGGCCCCGTGTAAAAAGGGTTCAGGTAACAACCGTATGGGTCGGGAGGTCAGGTGGGAGAGAAGGTGAGTTTTAGTGAATggggc                                                                                                      >  2:649205/1‑147 (MQ=18)

                                                ccAGCAACGGCCCGTAGGGCGAGCGAAGCTAGACAACAACCACGCCCCACCAATCTTAAAGATTAGCCACTAATAAAAAAAATACATGTAACACCAGTAATTAAAGTAAACTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCg                                                                                                     >  2:649292/1‑149 (MQ=16)

                                                  aGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTACCACCCGTTTGGGTCGTGAGGTCAGGTGGTAGGGCAGGTGACGTTTAATCAATTGGTCGcg                                                                                                   >  2:649261/1‑148 (MQ=37)

                                                   gCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGGAGCGCAGGTGACTGTTAATGAATTGGTCGCAg                                                                                                  >  1:649247/1‑149 (MQ=38)

                                                      aCGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGt                                                                                                                                               >  1:649338/1‑101 (MQ=255)

                                                             gTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                        <  2:649149/149‑1 (MQ=255)

                                                             gTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATcc                                                                                        <  2:649150/149‑1 (MQ=255)

                                                                 ggCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCa                                                                                    <  2:649151/149‑1 (MQ=255)

                                                                             gaGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAt                                                                        >  2:3535240/1‑149 (MQ=255)

                                                                                   tCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAg                                                                  <  2:649155/149‑1 (MQ=255)

                                                                                    ccTGCACGACCCACCAATCTTAAAGATTGGCCGCGCGTAAAACTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGCGCAGTTTACTTTTAATCTTTTGTGCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAgg                                                                 <  2:649156/149‑1 (MQ=25)

                                                                                      tGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATggg                                                                                                                                                   >  1:649344/1‑65 (MQ=255)

                                                                                      tGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                               <  1:649157/149‑1 (MQ=255)

                                                                                      tGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                               >  1:649174/1‑149 (MQ=255)

                                                                                       gCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtgg                                                              >  2:649272/1‑149 (MQ=255)

                                                                                            aCCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACt                                                         >  1:649242/1‑149 (MQ=255)

                                                                                               caccaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTag                                                                                                                                >  1:649329/1‑75 (MQ=255)

                                                                                                accaATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTa                                                     <  1:649160/149‑1 (MQ=255)

                                                                                                  caATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTag                                                    <  1:649161/148‑1 (MQ=255)

                                                                                                    aTCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAAt                                                                        >  1:649346/1‑126 (MQ=255)

                                                                                                     tCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTg                                                                                                                        >  2:649357/1‑77 (MQ=255)

                                                                                                       ttAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACg                                              >  1:649267/1‑149 (MQ=255)

                                                                                                        tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACg                                              >  1:649263/1‑148 (MQ=255)

                                                                                                        tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGt                                             >  2:649274/1‑149 (MQ=255)

                                                                                                        tAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGt                                             >  2:649252/1‑149 (MQ=255)

                                                                                                         aaaGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTg                                            >  1:649224/1‑149 (MQ=255)

                                                                                                           aGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGaa                                          >  1:649238/1‑149 (MQ=255)

                                                                                                           aGATTGGACCCTATTATATATCTTTCCGCTAACACCCGTAGGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCa                                                                                                   <  2:649171/92‑1 (MQ=17)

                                                                                                            gATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAg                                                                                                  >  1:649171/1‑92 (MQ=255)

                                                                                                            gATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAg                                         >  1:649165/1‑149 (MQ=255)

                                                                                                              ttGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTa                                                                                                                                             >  2:649332/1‑47 (MQ=255)

                                                                                                              ttGGCCCCGAGTAAAAATCTTTCAGGTAACACCAGTATGGGTCGTTAGCGCAGTTGGTAGAGCAGTTGACTTTTAATCTTTTGCGCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGa                                       <  2:649164/149‑1 (MQ=25)

                                                                                                               tGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGa                                                                                                                       >  1:649170/1‑68 (MQ=255)

                                                                                                                taccccGAGTAAAAATCTTTCAGGTATCACCCGTATGGGTCGTTAGCTCAGTTGGTAGCGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATa                                     <  2:1454400/147‑1 (MQ=255)

                                                                                                                 gCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATg                                                                                                                                                     >  2:649347/1‑36 (MQ=255)

                                                                                                                    ccGAGTAAAAATCTTTCAGGTAACACCCGTATggg                                                                                                                                                   >  2:649353/1‑35 (MQ=255)

                                                                                                                     cGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCa                                                                                                                            >  1:649276/1‑57 (MQ=255)

                                                                                                                         tAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATa                                     <  1:649167/140‑1 (MQ=255)

                                                                                                                          aaaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGtt                           >  1:649250/1‑149 (MQ=255)

                                                                                                                           aaaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCATTTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTa                          >  2:649265/1‑149 (MQ=255)

                                                                                                                            aaaTCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaaaa                                                                 >  2:649367/1‑107 (MQ=255)

                                                                                                                               tCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAg                                                                                                                           >  2:649337/1‑48 (MQ=255)

                                                                                                                                cTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaa                                                                   >  1:649351/1‑103 (MQ=255)

                                                                                                                                    cAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTc                                                                                              <  2:649169/72‑1 (MQ=255)

                                                                                                                                    cAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTc                                                                                              >  1:649169/1‑72 (MQ=255)

                                                                                                                                    cAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGcc                 <  2:3723681/149‑1 (MQ=255)

                                                                                                                                             cccGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTaaa                                                                   >  1:649370/1‑90 (MQ=255)

                                                                                                                                             cccGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATGTaaa                                                                   >  1:649350/1‑90 (MQ=25)

                                                                                                                                               cGTCTGGGTCGATAGCTCCGTCGGCCGAGCACGCGCCTTTTCCTCCCGTGGGCGCAGGGTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCgag      <  2:649247/149‑1 (MQ=18)

                                                                                                                                                gTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCgaga     <  2:649174/149‑1 (MQ=255)

                                                                                                                                                 ttggggTCGTTTGATCAGTTGGTAGAGCAGTTTAGTTTTATTCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCATTTTAAAGGTTGTTTCTGGTAGATATCGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAc    <  2:649183/146‑1 (MQ=18)

                                                                                                                                                 tATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACtt                                                                                                                    <  2:649173/37‑1 (MQ=37)

                                                                                                                                                 tATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACtt                                                                                                                    >  1:649173/1‑37 (MQ=37)

                                                                                                                                                 tATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGAc    >  1:649270/1‑149 (MQ=255)

                                                                                                                                                 ctcgggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtg                                                               <  2:649192/87‑1 (MQ=37)

                                                                                                                                                  aTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTaa                                                                                                                <  1:649335/40‑1 (MQ=33)

                                                                                                                                                  aTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAAt                                                                                                           <  1:649333/45‑1 (MQ=32)

                                                                                                                                                  aTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTgg                                                                                                        <  1:649337/48‑1 (MQ=32)

                                                                                                                                                  aTGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTg                                                                                                         <  1:649332/47‑1 (MQ=32)

                                                                                                                                                    gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAggtggt                                                             <  1:649196/89‑1 (MQ=255)

                                                                                                                                                    gggTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTag                                                    <  1:649189/98‑1 (MQ=255)

CAGTTTTAACATCAAACTCAGATGTTAAGCGTGAAGGATAACGTTGCGCCAGCAACGGCCCGTAGGGCGAGCGAAGCGAGTCATCCTGCACGACCCACCAATCTTAAAGATTGGCCCCGAGTAAAAATCTTTCAGGTAACACCCGTATGGGTCGTTAGCTCAGTTGGTAGAGCAGTTGACTTTTAATCAATTGGTCGCAGGTTCGAATCCTGCACGACCCACCAATTTAAAGGTGGTTACTGGTAGAGAACGTGAAGGATAACGTTGCGTTAGCAACGGCCCGAAGGGCGAGACGA  >  U00096/781221‑781516

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 15 ≤` `ATCG/ATCG` `< 32 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.