| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | U00096 | 4,119,138 | C→T | G65S (GGC→AGC) | rraA ← | ribonuclease E inhibitor protein A |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | U00096 | 4,119,138 | 0 | C | T | 99.6% | 854.3 / ‑5.3 | 225 | G65S (GGC→AGC) | rraA | ribonuclease E inhibitor protein A |
| Reads supporting (aligned to +/- strand): ref base C (1/0); new base T (98/125); total (100/125) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.42e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 225 total aligned reads displayed.
CGCCATCGCCTGGATGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGCGGTTCCACGACGTT > U00096/4118992‑4119282 | cgccATCGCCTGGATGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTAt < 1:3560304/149‑1 (MQ=255)cgccATCGCCTGGATGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTAt < 2:3560305/149‑1 (MQ=255)cgccATCGCCTGGATGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTAt > 1:3560392/1‑149 (MQ=255) ccATCGCCTGGATGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGTCCAGTGCGCGACGAACAGAACCACCGCTATc < 1:3560308/148‑1 (MQ=255) cATCGCCTGGATGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGATCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATcga < 2:3560312/149‑1 (MQ=255) cATCGCCTGGATGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATcga < 1:3560310/149‑1 (MQ=255) aTCGCCTGGATGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATcgac > 2:3560438/1‑149 (MQ=255) tCGCCTGGATGCCGATATCCAACTCTTCCAGGGCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATcgacg < 1:3560315/149‑1 (MQ=255) ccTGGATGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACa < 2:3560317/149‑1 (MQ=255) cTGGATGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACaa > 2:3560475/1‑149 (MQ=255) cTGGATGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGACGTAAATGAACAGACATTCCCATTCATTTTGTACTTCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACaa > 2:3560431/1‑149 (MQ=255) ttgctGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCTCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAg < 1:3560319/145‑1 (MQ=255) tGGATGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAg > 2:3560400/1‑149 (MQ=255) tGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAaca < 2:3560321/149‑1 (MQ=255) ccGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAacac < 1:3560324/148‑1 (MQ=255) cGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGa < 2:3560325/149‑1 (MQ=255) cGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGa > 2:3560445/1‑149 (MQ=255) tacccAACTCTTCCCGGTCATCTCCCTGACGCCCCGCGCCGTAAATGACCAGACCTTCCCATTCTTTTTGTACTGCCACCCGCGCCAGTTCAGCATCGACCTGTGCGCGACGAACAGAACCCCCGCTATCGACGACAAGAACACGACCa < 2:3560329/146‑1 (MQ=255) atCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCa > 1:3560467/1‑148 (MQ=255) atCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCAc < 1:3560330/149‑1 (MQ=255) tCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACg > 1:3560424/1‑149 (MQ=255) tCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACg > 1:3560419/1‑149 (MQ=255) tCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACg < 2:3560334/149‑1 (MQ=255) aaCTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGcc > 2:3560423/1‑149 (MQ=255) aCTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCa < 2:3560337/149‑1 (MQ=255) aCTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCa < 1:3560336/149‑1 (MQ=255) ctTCCAGGTCATCTACCTGACGCACCGCGCCCTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACAACCGCTATCGACGACAAGAACACGAc > 1:3560495/1‑138 (MQ=255) ccAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTg > 1:3560413/1‑148 (MQ=255) aGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTc < 2:3560342/149‑1 (MQ=255) gTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGa < 1:3560344/149‑1 (MQ=255) gTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGa < 2:3560345/149‑1 (MQ=255) cATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGc < 1:3560347/149‑1 (MQ=255) cATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGAACAGTGCGCGACGAACAGACCAACCGCTATcgac > 1:3560456/1‑115 (MQ=255) tCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAg > 1:3560442/1‑149 (MQ=255) tCTACCTGACGCACCGCGCCGT‑AATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGc > 1:3560536/1‑146 (MQ=255) tACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGAt < 1:3560350/149‑1 (MQ=255) aCCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCa < 2:3560352/145‑1 (MQ=255) aCCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACCGCCATTCTGt > 1:3560529/1‑138 (MQ=255) aCCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGACAGACGCGCCAGATCAGCATCGACCAGTGAGCGACGAACAGAACCACCGCTATCGACAAAAAGAACACGAACACGGCCATTCTGTTCGAGc > 2:3560461/1‑144 (MQ=255) cTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGCCCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGt < 2:3560354/149‑1 (MQ=255) gACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGt < 1:3560356/147‑1 (MQ=255) gACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTAc > 2:3560489/1‑149 (MQ=255) gACGCACCGCGCCGTAAATGACCAGACATTCCCATTCATTTTGTACTGCCAGACGCGCAAGTTCAGCATCGACCAGTGCGCGACGAACAGAACAACAGCTATCGACGACAAGAAAACGACCACGTCCATTCTGGTCGAGCAGATCGTAc > 2:3560416/1‑149 (MQ=255) cgcgCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAAcc > 1:3560360/1‑149 (MQ=255) cGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTg < 2:3560361/149‑1 (MQ=255) tAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTc < 2:3560363/149‑1 (MQ=255) aaaTGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTcc < 1:3560365/149‑1 (MQ=255) aaTGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTcc > 1:3560556/1‑148 (MQ=255) aaTGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCt > 1:3560490/1‑149 (MQ=255) aaTGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCt > 1:3560463/1‑149 (MQ=255) aTGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTc < 1:3560367/149‑1 (MQ=255) tGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCg < 1:3560370/149‑1 (MQ=255) aCCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGaa < 2:3560372/149‑1 (MQ=255) aCCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGaa < 2:3560374/149‑1 (MQ=255) cAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATcga < 1:3560377/83‑1 (MQ=255) aGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACa < 1:3560379/149‑1 (MQ=255) gACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACAt < 1:3560381/149‑1 (MQ=255) aCCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACAtt < 2:3560384/149‑1 (MQ=255) ccTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACAttt < 1:3560385/149‑1 (MQ=255) ttCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTa > 1:3560447/1‑149 (MQ=255) cccATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACTACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTAcc < 2:3560388/149‑1 (MQ=255) attcattTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTg > 1:3560545/1‑149 (MQ=255) attcattTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTg > 1:3560452/1‑149 (MQ=255) ttcattTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGa < 1:3560390/149‑1 (MQ=255) ttttGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGattat > 2:3560537/1‑149 (MQ=255) ttttGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGattat > 2:3560457/1‑149 (MQ=255) ttttGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGattat > 2:3560477/1‑149 (MQ=255) tttGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGattatt < 1:3560394/149‑1 (MQ=255) ttGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTAttt < 2:3560396/149‑1 (MQ=255) ttGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTAttt > 2:3560473/1‑149 (MQ=255) gTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGt < 1:3560398/149‑1 (MQ=255) tACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCACCCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTc > 1:3560510/1‑149 (MQ=255) cataCGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCaa < 2:3560403/146‑1 (MQ=255) cAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCaa < 2:3560405/149‑1 (MQ=255) aGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCaaa < 1:3560406/149‑1 (MQ=255) aGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCaaa > 1:3560517/1‑149 (MQ=255) gACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAac > 2:3560525/1‑149 (MQ=255) gcgcCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAacgac > 2:3560498/1‑149 (MQ=255) cgcCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGGTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAacgac < 1:3560410/148‑1 (MQ=255) cgcCAGTTCAGCAGCGACCAGCGCGCGACGAACAGACCCACCGCTATCGACGACAACAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAacgacg < 2:3560409/149‑1 (MQ=255) ccAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGcc > 2:3560572/1‑149 (MQ=255) cAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCAATTCTTTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACAGTGATTATTTGTCCGCCAAACGACGccc > 2:3560554/1‑149 (MQ=255) aGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTAGTTGTCCGCCAACCGACGCCCg > 2:3560412/1‑149 (MQ=255) tCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTcc < 2:3560414/149‑1 (MQ=255) tCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTcc > 2:3560471/1‑149 (MQ=255) cATCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGc > 1:3560564/1‑147 (MQ=255) tCGACCAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCaaa > 2:3560496/1‑149 (MQ=255) gACCAGTGCGCGACGAAAAGACCCACCGCTATCTACGACAAGAACCCGACAACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGCTTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGt < 1:3560416/149‑1 (MQ=255) aCCAGTGCTCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCAGCCAAACGACGCCCGTCCGCCAAAGtt > 2:3560547/1‑149 (MQ=255) ccAGTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTg > 2:3560515/1‑149 (MQ=255) gTGCGCGACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGgag > 2:3560503/1‑149 (MQ=255) gcgcGACGAACAGAACAACCTCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACATCAACCCGTTGTCCTCGAAACATTTTAACGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGaa < 2:3560420/149‑1 (MQ=255) cgcgACGAACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAAc < 1:3560422/149‑1 (MQ=255) gacgaACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGc < 1:3560426/149‑1 (MQ=255) gacgaACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGc < 2:3560425/149‑1 (MQ=255) cgaACAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGCgg > 2:3560511/1‑149 (MQ=255) aaCAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGc < 1:3560429/145‑1 (MQ=255) cAGAACCACCGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGCGGTTcc < 1:3560431/149‑1 (MQ=255) caccGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGCGGTTCCacgacg > 2:3560560/1‑149 (MQ=255) accGCTATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGCGGTTCCACGACGt > 1:3560576/1‑149 (MQ=255) | CGCCATCGCCTGGATGCCGATATCCAACTCTTCCAGGTCATCTACCTGACGCACCGCGCCGTAAATGACCAGACCTTCCCATTCATTTTGTACTGCCAGACGCGCCAGTTCAGCATCGACCAGTGCGCGACGAACAGAACCACCGCCATCGACGACAAGAACACGACCACGGCCATTCTGTTCGAGCAGATCGTACAGCAACCCGTTGTCCTCGAAACATTTTACCGTGATTATTTGTCCGCCAAACGACGCCCGTCCGCCAAAGTTGGAGAACAGCGGTTCCACGACGTT > U00096/4118992‑4119282 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |