| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | U00096 | 4,635,170 | +G | coding (141/870 nt) | rob ← | DNA‑binding transcriptional dual regulator Rob |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | U00096 | 4,635,168 | 1 | . | G | 98.0% | 978.2 / 9.0 | 255 | coding (143/870 nt) | rob | DNA‑binding transcriptional dual regulator Rob |
| Reads supporting (aligned to +/- strand): ref base . (1/4); new base G (130/120); total (131/124) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.03e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 276 total aligned reads displayed.
GGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑AT‑GG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCAT > U00096/4635020‑4635310 | ggCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAGCGACGAGCACGAATATACGCGCCAATAGC‑At < 1:4709506/149‑1 (MQ=255) gCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑AT‑g < 1:4709510/149‑1 (MQ=255) gCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑AT‑g < 2:4709511/149‑1 (MQ=255) aCTGCTTCTTGATTGCGCGGGTATATGTCTGTTGAGAGTCGTAGGGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTTGTGGGACCGCCGATTTCGACAATCGACGAGCACGAATATACGCGCCAATAGC‑AT‑gggcc < 2:4709516/149‑4 (MQ=255) aCTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑AT‑gggcc > 1:4709613/1‑146 (MQ=255) tGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCTCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAAAAGC‑AT‑gggccag > 1:4709691/1‑144 (MQ=255) gCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGt < 1:4709520/149‑1 (MQ=255) tcttGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATATC‑ATGGG‑CCAGTg > 1:4709724/1‑147 (MQ=255) ttGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACAt < 1:4709524/149‑1 (MQ=255) tGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATc > 2:4709628/1‑149 (MQ=255) aTGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCttt < 1:4709529/149‑1 (MQ=255) aTGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCttt < 2:4709530/149‑1 (MQ=255) tGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGATATCTTTa < 1:4709532/149‑1 (MQ=255) tGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTAAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTa > 2:4709644/1‑149 (MQ=255) cgGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAAc < 1:4709537/148‑1 (MQ=255) gggTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGCCGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACATACGACGCGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACTTCTTTAAACAt > 1:4709680/1‑149 (MQ=255) gTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATtc > 1:4709654/1‑149 (MQ=255) tAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATtct < 1:4709540/149‑1 (MQ=255) tAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGCCCTAGTGCGCCCGCCGATTTCGACAAACGACGAGCCCGAATATACGCCCCAATAGCAAG‑GG‑CCAGTGACATCTTTAAACATact > 2:4709676/1‑149 (MQ=255) aaaTGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATtctc < 2:4709541/149‑1 (MQ=255) aaTGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTctct > 1:4709667/1‑149 (MQ=255) gTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTa < 2:4709544/149‑1 (MQ=255) cTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAg < 2:4709546/149‑1 (MQ=255) cTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAg > 1:4709618/1‑149 (MQ=255) ttGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGc < 2:4709552/149‑1 (MQ=255) ttGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGc < 1:4709551/149‑1 (MQ=255) tGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGt > 1:4709739/1‑146 (MQ=255) tGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGcc > 2:4709760/1‑149 (MQ=255) agagTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCAc < 2:4709555/149‑1 (MQ=255) agTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACtt > 2:4709648/1‑149 (MQ=255) tCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTgg < 1:4709559/149‑1 (MQ=255) gAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGaa < 2:4709561/149‑1 (MQ=255) aGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACAGCTTTAAACATTCTCTGTAAGTGCCACTTGGAAt > 1:4709704/1‑148 (MQ=255) gCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATaa < 2:4709564/149‑1 (MQ=255) ggTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAAcc < 2:4709567/149‑1 (MQ=255) tATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGCCCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTg > 2:4709685/1‑149 (MQ=255) tATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATaannnn < 2:4709570/149‑5 (MQ=255) tATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTg > 2:4709749/1‑149 (MQ=255) aTTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGc < 1:4709572/149‑1 (MQ=255) ttGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCt > 2:4709671/1‑149 (MQ=255) tcAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCttt < 2:4709576/148‑1 (MQ=255) gCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCttt > 2:4709803/1‑149 (MQ=255) gCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCttt > 2:4709660/1‑149 (MQ=255) gcgcGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTcgc < 2:4709578/149‑1 (MQ=255) gcgATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATACCCTGCTTTcgccg > 1:4709797/1‑149 (MQ=255) gATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCt > 1:4709742/1‑149 (MQ=255) aTGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTa > 2:4709705/1‑149 (MQ=255) gTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACa < 1:4709581/149‑1 (MQ=255) tCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACAt > 2:4709693/1‑149 (MQ=255) ccAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACAtt > 2:4709717/1‑149 (MQ=255) aGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGt > 1:4709731/1‑149 (MQ=255) gAATCGGACGCGCAGTCAGGCGTAGTGAGACCGACGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTc > 2:4709877/1‑149 (MQ=255) aaTCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGt < 1:4709587/147‑1 (MQ=255) aaTCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCg < 2:4709588/149‑1 (MQ=255) aTCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGa > 1:4709713/1‑149 (MQ=255) cGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCTCGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGc < 1:4709591/149‑1 (MQ=255) gACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCg > 1:4709804/1‑144 (MQ=255) gACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGa > 2:4709781/1‑149 (MQ=255) cgcgCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGa > 1:4709751/1‑147 (MQ=255) cgcgCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACa < 1:4709596/149‑1 (MQ=255) cgcgCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACa > 2:4709736/1‑149 (MQ=255) cgcgCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACa < 2:4709597/149‑1 (MQ=255) cgcAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAgg < 2:4709601/149‑1 (MQ=255) aGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGc > 1:4709762/1‑149 (MQ=255) aGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGc > 2:4709699/1‑149 (MQ=255) aGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGc < 2:4709603/149‑1 (MQ=255) cAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCt < 1:4709604/147‑1 (MQ=255) gCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGAc < 1:4709608/149‑1 (MQ=255) aCCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCtt < 2:4709610/149‑1 (MQ=255) ccgccgATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTc > 2:4709712/1‑149 (MQ=255) cgccgATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTcc < 2:4709613/149‑1 (MQ=255) gccgATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGCTGACCTTc > 1:4709719/1‑147 (MQ=255) gATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTccagcc < 2:4709618/149‑1 (MQ=255) gATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGA‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGAGACAGGGGCTGATCCAGATGACCTTccagcc > 1:4709776/1‑149 (MQ=255) aTTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAACCATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTccagcca > 2:4709728/1‑149 (MQ=255) aTTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTccagcca > 1:4709784/1‑149 (MQ=255) gACAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTa < 2:4709621/149‑1 (MQ=255) aCAAACTACGAGCACGAATATACTCGCAAATAGC‑AT‑GGTCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTaa < 1:4709622/149‑1 (MQ=255) aCAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTTCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTaa > 1:4709813/1‑149 (MQ=255) cAAACGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTaaa < 1:4709626/149‑1 (MQ=255) aaCGACGAGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAg < 1:4709628/149‑1 (MQ=255) gacgaGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATATCCTGCTTTCGCCGCTACTTTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTc < 1:4709631/149‑1 (MQ=255) gacgaGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTc > 2:4709745/1‑149 (MQ=255) ccgaGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTcg < 2:4709632/148‑1 (MQ=255) cgaGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTcgc < 2:4709636/149‑1 (MQ=255) aGCACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGa < 1:4709638/149‑1 (MQ=255) cACGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaat > 2:4709826/1‑149 (MQ=255) cGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGCCAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaataa > 2:4709765/1‑149 (MQ=255) cGAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaataa < 2:4709641/149‑1 (MQ=255) gAATATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGa < 1:4709642/144‑1 (MQ=255) aaTATACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaataat < 1:4709646/148‑1 (MQ=255) atatACGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGCCCTTCCAGCCAGATTAAAAGGTCGCGAATAATGc > 2:4709836/1‑149 (MQ=255) tataCGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGcc < 1:4709648/149‑1 (MQ=255) tataCGCGCCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGcc > 1:4709841/1‑149 (MQ=255) gcgcCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCt > 1:4709878/1‑149 (MQ=255) gcCAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGa > 1:4709767/1‑149 (MQ=255) ccAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGa < 2:4709651/103‑1 (MQ=255) ccAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGa > 1:4709651/1‑103 (MQ=255) ccAATAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGAt > 1:4709864/1‑149 (MQ=255) aTAGC‑ATGGG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCa < 2:4709656/149‑1 (MQ=255) | GGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGC‑AT‑GG‑CCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCAT > U00096/4635020‑4635310 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |