| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | U00096 | 4,635,170 | +G | coding (141/870 nt) | rob ← | DNA‑binding transcriptional dual regulator Rob |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | U00096 | 4,635,168 | 1 | . | G | 98.9% | 693.1 / 0.1 | 181 | coding (143/870 nt) | rob | DNA‑binding transcriptional dual regulator Rob |
| Reads supporting (aligned to +/- strand): ref base . (0/2); new base G (96/83); total (96/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 2.19e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.69e-01 | |||||||||||
Only 100 of 195 total aligned reads displayed.
GCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑GGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATA > U00096/4635021‑4635311 | gCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑g < 1:3168339/149‑1 (MQ=255)gCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑g > 2:3168413/1‑149 (MQ=255)gCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑g < 1:3168338/149‑1 (MQ=255) aaaCTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑ggg < 2:3168340/149‑2 (MQ=255) aaCTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑gggc > 2:3168450/1‑147 (MQ=255) cTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑gggagt > 2:3168342/1‑145 (MQ=255) tGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑gggccag > 1:3168475/1‑144 (MQ=255) cttcttGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCG‑TGGGCCAGTg > 2:3168393/1‑149 (MQ=255) cttcttGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTg > 1:3168390/1‑149 (MQ=255) ttcttGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGa > 2:3168483/1‑149 (MQ=255) ttcttGAATGCGCGGGTAAATGGCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGa < 1:3168345/149‑1 (MQ=255) tcttGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGAc > 2:3168401/1‑149 (MQ=255) tGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATc > 1:3168444/1‑149 (MQ=255) aTGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCttt < 2:3168348/149‑1 (MQ=255) tGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTa < 1:3168349/149‑1 (MQ=255) tGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTa > 1:3168504/1‑149 (MQ=255) gcgcGGGTAACTGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATCTACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTaa < 2:3168351/149‑1 (MQ=255) gcgGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGCGCACGAATATCCGCGCCAAGAGCC‑TGGGCCAGTGACATCTTTAAAc > 2:3168513/1‑149 (MQ=255) gTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATtc > 1:3168481/1‑149 (MQ=255) aaaTGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATtctc < 2:3168356/149‑1 (MQ=255) aaaTGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATtctc < 1:3168355/149‑1 (MQ=255) aaTGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTctct < 1:3168358/149‑1 (MQ=255) aTGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATtcgaat < 2:3168360/149‑5 (MQ=255) tGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGt < 2:3168362/149‑1 (MQ=255) tGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGt > 2:3168435/1‑149 (MQ=255) gagaGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCa < 2:3168366/149‑1 (MQ=255) gagaGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCa < 1:3168365/149‑1 (MQ=255) agagTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCAc < 1:3168368/149‑1 (MQ=255) agTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACAt < 1:3168370/131‑1 (MQ=255) tCGTAGCTGTATTGCAGCGCTATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACTAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTgg < 2:3168374/149‑1 (MQ=255) cGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGa < 1:3168376/149‑1 (MQ=255) gAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGaa > 1:3168429/1‑149 (MQ=255) gAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGaa > 1:3168457/1‑149 (MQ=255) aaGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAAt > 1:3168469/1‑149 (MQ=255) aGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATa < 2:3168378/149‑1 (MQ=255) gCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATaa > 2:3168451/1‑149 (MQ=255) ggTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAAcc < 1:3168381/149‑1 (MQ=255) ggTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGGGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAAcc < 2:3168380/149‑1 (MQ=255) aGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTcg > 2:3168460/1‑149 (MQ=255) gATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTg > 1:3168384/1‑138 (MQ=255) ccAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACAtt < 1:3168386/149‑1 (MQ=255) ccAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACAt > 1:3168467/1‑148 (MQ=255) aGAATCGGACGCGCAGTTAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGt > 2:3168453/1‑149 (MQ=255) aGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGt < 2:3168387/149‑1 (MQ=255) gAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTc > 1:3168551/1‑149 (MQ=255) tCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAg > 2:3168442/1‑149 (MQ=255) cGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACTTCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGc < 2:3168390/149‑1 (MQ=255) gACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGa > 2:3168516/1‑149 (MQ=255) gcAGTCAGGCGTAGTGCGACCGCCGATATCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAggg > 2:3168446/1‑149 (MQ=255) cAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCG‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAggg < 1:3168393/148‑1 (MQ=255) cAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAgggg < 2:3168394/149‑1 (MQ=255) tCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTg < 1:3168396/149‑1 (MQ=255) cAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGa > 1:3168464/1‑139 (MQ=255) ggCGTAGTGCGCCCGCCGATTTCGACAACCGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCGTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGCGCGACAGGGGCtatgc > 2:3168399/1‑145 (MQ=255) ggCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATc > 1:3168500/1‑149 (MQ=255) gCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATcc < 1:3168401/149‑1 (MQ=255) tAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGa < 2:3168403/129‑1 (MQ=255) tAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATcc > 2:3168466/1‑146 (MQ=255) aGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATAAACGCGCCAATAGCA‑T‑gggc > 1:3168571/1‑57 (MQ=255) aGTGAGACCGCCGATTTCGACAAACGAAGAGCACGAATATACGCGCAAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCGGTAAGTGCCACTTGGAATAACCTGCATTCGCCGCTACATTGTCGCGCGACAGGGGCTGATcc > 2:3168553/1‑145 (MQ=255) aCCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTATACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCtt > 2:3168478/1‑149 (MQ=255) gccgATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGAcc > 1:3168484/1‑144 (MQ=255) gccgATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTcca > 1:3168411/1‑149 (MQ=255) gccgATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTcca < 1:3168405/149‑1 (MQ=255) gATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAgg < 1:3168408/124‑1 (MQ=255) gATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGGGACAGCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTccagcc < 2:3168407/149‑1 (MQ=255) tttCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTccagccag > 2:3168499/1‑149 (MQ=255) ttCGACAAACGACGAGCACGAATATACGCGCCAATAGCAGG‑GGCCAGTGACCTCTTTAAACATTCTCTGTAAGTGCCACTTGGAATATCCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCGGATCCAGAGGACCTTCCAGCCAGa < 2:3168410/149‑1 (MQ=255) ttCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTccagcc > 2:3168473/1‑146 (MQ=255) tCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTccagcc > 1:3168566/1‑145 (MQ=255) aaCGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAg < 1:3168413/149‑1 (MQ=255) aaCGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAg < 1:3168414/149‑1 (MQ=255) acgacgAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAgg > 1:3168524/1‑149 (MQ=255) gacgaGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTc > 1:3168604/1‑149 (MQ=255) gacgaGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTc < 2:3168415/149‑1 (MQ=255) acgaGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTcg > 2:3168496/1‑149 (MQ=255) aGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTATCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTcc < 1:3168417/128‑1 (MQ=255) gCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaa < 2:3168419/149‑1 (MQ=255) gCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaa > 1:3168534/1‑149 (MQ=255) aCGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGACGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaata > 2:3168494/1‑149 (MQ=255) cGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaataa < 2:3168423/149‑1 (MQ=255) cGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGT‑AGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaataat < 2:3168421/149‑1 (MQ=255) gAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATcc > 1:3168422/1‑111 (MQ=255) gAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaataat > 2:3168572/1‑149 (MQ=255) gAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaataat < 2:3168425/149‑1 (MQ=255) gAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaataa < 1:3168426/148‑1 (MQ=255) aaTATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATg > 2:3168528/1‑149 (MQ=255) aaTATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATg > 2:3168578/1‑149 (MQ=255) atatACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATACCCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGc > 2:3168491/1‑149 (MQ=255) tataCGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGAAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGcc < 2:3168428/149‑1 (MQ=255) ataCGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATACCCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGCTCCAGCTGACCTTCCAGCCAGCTTAAAAGGTCGCGAATAATGCCg > 2:3168556/1‑149 (MQ=255) taCGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGc > 1:3168493/1‑146 (MQ=255) taCGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCgg > 1:3168548/1‑149 (MQ=255) gcgcCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCt > 2:3168487/1‑149 (MQ=255) gcgcCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCt < 2:3168430/149‑1 (MQ=255) ccAATAGCAGG‑GGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGAt < 1:3168432/149‑1 (MQ=255) caaaTAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGAt > 1:3168509/3‑149 (MQ=255) cAATAGCT‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATc < 2:3168433/149‑1 (MQ=255) aGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATa < 1:3168435/149‑1 (MQ=255) aGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATa < 2:3168437/149‑1 (MQ=255) | GCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑GGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCATA > U00096/4635021‑4635311 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |