BRESEQ :: Evidence

Predicted mutation
evidence	seq id	position	mutation	annotation	gene	description
RA	U00096	1,618,806	Δ1 bp	coding (103/666 nt)	marC ←	inner membrane protein MarC

Read alignment evidence...
	seq id	position		ref	new	freq	score (cons/poly)	reads	annotation	genes	product
*	U00096	1,618,806	0	T	.	100.0%	1264.0 / NA	262	coding (103/666 nt)	marC	inner membrane protein MarC
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (122/140); total (122/140)

Only 100 of 262 total aligned reads displayed.

TTAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAG  >  U00096/1618662‑1618949

ttAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTtgc                                                                                                                                            >  1:1475231/1‑149 (MQ=255)

 tAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTtgcc                                                                                                                                           <  1:1475090/149‑1 (MQ=255)

   aGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTtgcctg                                                                                                                                         <  2:1475091/149‑1 (MQ=255)

       gccTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAg                                                                                                                                     <  1:1475097/149‑1 (MQ=255)

       gccTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAg                                                                                                                                     <  2:1475096/149‑1 (MQ=255)

       gccTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAg                                                                                                                                     >  2:1475270/1‑149 (MQ=255)

         cTGCAATTCGCAGACCTGGAATCGAAATGACAAATGTATAACTCACAAGTTGCCCGGCGTAATACGCCACCATCATGATGTCAAATACCTACACCGAGTCCATCAACGACAGACGATTACGTTCGGCACTGTTCA‑GTAGACTGCAAGGc                                                                                                                                   >  2:1475313/1‑149 (MQ=255)

         cTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGc                                                                                                                                   >  2:1475275/1‑149 (MQ=255)

          tGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGcc                                                                                                                                  >  2:1475288/1‑149 (MQ=255)

          tGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGcc                                                                                                                                  >  2:1475199/1‑149 (MQ=255)

           gCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCa                                                                                                                                 >  1:1475268/1‑149 (MQ=255)

           gCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCa                                                                                                                                 >  1:1475264/1‑149 (MQ=255)

            cAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCaa                                                                                                                                <  2:1475102/149‑1 (MQ=255)

            cAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCaa                                                                                                                                <  1:1475101/149‑1 (MQ=255)

                tCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGaaa                                                                                                                            <  1:1475105/149‑1 (MQ=255)

                    aGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAAc                                                                                                                        >  2:1475252/1‑149 (MQ=255)

                    aGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAAc                                                                                                                        <  1:1475109/149‑1 (MQ=255)

                      aCCGGGAATCGAAACGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAAcgc                                                                                                                      <  2:1475111/149‑1 (MQ=255)

                         gggAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGAc                                                                                                                   <  2:1475115/149‑1 (MQ=255)

                         gggAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGAc                                                                                                                   <  1:1475116/149‑1 (MQ=255)

                                gAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAgttgtt                                                                                                            >  2:1475141/1‑149 (MQ=255)

                                  aaTGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTaa                                                                                                          <  2:1475119/149‑1 (MQ=255)

                                   aTGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTCCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAAt                                                                                                         <  1:1475121/149‑1 (MQ=255)

                                    tGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATg                                                                                                        <  2:1475124/149‑1 (MQ=255)

                                        aaaTGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGtt                                                                                                    <  2:1475128/149‑1 (MQ=255)

                                        aaaTGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACAACGAGGCCATCATCGACTGACGATTAGGTTCGGCACTGTGCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGtt                                                                                                    <  1:1475127/149‑1 (MQ=255)

                                         aaTGTATCCATCACCAGTTGCCCGGCGTAATTCGCCACCATCATGATGGCAAATACGTACACCGAGGCAATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTa                                                                                                   <  1:1475131/149‑1 (MQ=255)

                                         aaTGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTa                                                                                                   <  2:1475133/149‑1 (MQ=255)

                                          aTGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAg                                                                                                  >  2:1475242/1‑149 (MQ=255)

                                          aTGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAg                                                                                                  >  1:1475358/1‑149 (MQ=255)

                                           tGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGc                                                                                                 >  2:1475226/1‑149 (MQ=255)

                                           tGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGc                                                                                                 <  2:1475137/149‑1 (MQ=255)

                                           tGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGc                                                                                                 >  2:1475258/1‑149 (MQ=255)

                                             tATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTa                                                                                               <  1:1475140/149‑1 (MQ=255)

                                              aTCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTaa                                                                                              >  2:1475247/1‑149 (MQ=255)

                                               tCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAAc                                                                                             <  1:1475143/149‑1 (MQ=255)

                                               tCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAAc                                                                                             >  2:1475215/1‑149 (MQ=255)

                                                  aTCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCGATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGgc                                                                                          >  1:1475168/1‑149 (MQ=255)

                                                  aTCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGgc                                                                                          >  1:1475261/1‑149 (MQ=255)

                                                  aTCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGgc                                                                                          >  1:1475307/1‑149 (MQ=255)

                                                     aCCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGgcagc                                                                                       <  2:1475148/149‑1 (MQ=255)

                                                       cAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGCCAGTTGTTAATGGGTTAGCTAACGGCAGCaa                                                                                     >  2:1475304/1‑149 (MQ=255)

                                                        aGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCaa                                                                                     >  1:1475237/1‑148 (MQ=255)

                                                           tGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAAcacc                                                                                 <  1:1475150/149‑1 (MQ=255)

                                                            gCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAAcacca                                                                                <  2:1475151/149‑1 (MQ=255)

                                                                ggCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAAcaccac                                                                               >  1:1475370/1‑146 (MQ=255)

                                                                 gCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGc                                                                           >  2:1475371/1‑149 (MQ=255)

                                                                  cGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGcc                                                                          >  2:1475361/1‑149 (MQ=255)

                                                                  cGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGcc                                                                          >  1:1475211/1‑149 (MQ=255)

                                                                    tAATACGCCAGCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGcccc                                                                        <  2:1475155/149‑1 (MQ=255)

                                                                         cGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGc                                                                    <  1:1475159/148‑1 (MQ=255)

                                                                          gCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCa                                                                  >  2:1475294/1‑149 (MQ=255)

                                                                          gCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCa                                                                  >  1:1475333/1‑149 (MQ=255)

                                                                          gCCACCATCATGATCGCAAATACGTACACCGAGGCCAGCAACGACTGACGATTACGTGCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCa                                                                  <  2:1475160/149‑1 (MQ=255)

                                                                           ccaccaTCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCaa                                                                 <  2:1475162/149‑1 (MQ=255)

                                                                             accaTCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAAtt                                                               <  2:1475166/149‑1 (MQ=255)

                                                                                 tcatGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCtt                                                           <  2:1475170/149‑1 (MQ=255)

                                                                                   atgatgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTa                                                         <  1:1475172/149‑1 (MQ=255)

                                                                                    tgatgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCaa                                                                 >  1:1475318/1‑140 (MQ=255)

                                                                                    tgatgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTaa                                                        <  2:1475174/149‑1 (MQ=255)

                                                                                    tgatgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTaa                                                        >  2:1475283/1‑149 (MQ=255)

                                                                                       tgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACa                                                     <  2:1475178/149‑1 (MQ=255)

                                                                                         gCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACaaa                                                   <  1:1475180/149‑1 (MQ=255)

                                                                                          cAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAAt                                                  >  2:1475356/1‑149 (MQ=255)

                                                                                           aaaTACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATACCGCGACAGTTGTTAATGGGTTAGCTAACGgcagc                                                                                       >  1:1475282/1‑111 (MQ=255)

                                                                                           aaaTACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATc                                                 >  1:1475330/1‑149 (MQ=255)

                                                                                            aaTACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCt                                                >  1:1475400/1‑149 (MQ=255)

                                                                                             aTACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTa                                               <  2:1475182/149‑1 (MQ=255)

                                                                                             aTACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTa                                               <  1:1475183/149‑1 (MQ=255)

                                                                                              tACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTaa                                              <  2:1475185/149‑1 (MQ=255)

                                                                                                 gTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACAt                                           <  2:1475189/149‑1 (MQ=255)

                                                                                                  tACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATc                                                 <  1:1475190/142‑1 (MQ=255)

                                                                                                   acacCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATtg                                         <  1:1475193/149‑1 (MQ=255)

                                                                                                    cacCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATtgg                                        <  2:1475194/149‑1 (MQ=255)

                                                                                                     acCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATtggt                                       >  2:1475322/1‑149 (MQ=255)

                                                                                                         aGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGgtt                                   >  2:1475331/1‑149 (MQ=255)

                                                                                                         aGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGgtt                                   <  1:1475197/149‑1 (MQ=255)

                                                                                                           gCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGgtt                                   <  1:1475201/147‑1 (MQ=255)

                                                                                                               tCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTACACAACTCTAACATTGGTGGTTGTTATc                             >  2:1475408/1‑149 (MQ=255)

                                                                                                                  aCGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCtg                          <  1:1475205/149‑1 (MQ=255)

                                                                                                                    gACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCtgtg                        <  2:1475206/149‑1 (MQ=255)

                                                                                                                      cTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTa                      >  1:1475297/1‑149 (MQ=255)

                                                                                                                        gACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATc                    <  1:1475208/149‑1 (MQ=255)

                                                                                                                        gACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATc                    <  2:1475209/149‑1 (MQ=255)

                                                                                                                         aCGATTTCTTTCGGCACTTTTCA‑GTTGCCTGCCAGGCCAAGAAATACCGCGACAGTTGTTAATGGGTTAGCTACCGTCAGCAAAACCACCAGCCCCAGGCCAATTGCTTTTAACTAATCTAACATTGGTGGTTGTTATCCTGTGTATCt                   <  2:1475212/149‑1 (MQ=255)

                                                                                                                           gATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTgg                 <  1:1475215/149‑1 (MQ=255)

                                                                                                                            aTTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTggg                >  2:1475414/1‑149 (MQ=255)

                                                                                                                              tACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGtt              >  1:1475389/1‑149 (MQ=255)

                                                                                                                               aCGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTa             <  2:1475219/149‑1 (MQ=255)

                                                                                                                                 gTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTAt            >  1:1475346/1‑148 (MQ=255)

                                                                                                                                 gTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATc           >  2:1475340/1‑149 (MQ=255)

                                                                                                                                  ttCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCa          <  1:1475222/149‑1 (MQ=255)

                                                                                                                                  ttCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCa          <  2:1475223/149‑1 (MQ=255)

                                                                                                                                    cGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATc                    <  1:1475226/137‑1 (MQ=255)

                                                                                                                                     ggCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGc        >  1:1475312/1‑148 (MQ=255)

                                                                                                                                      gCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGa      >  1:1475300/1‑149 (MQ=255)

                                                                                                                                       cACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGaa     <  1:1475228/149‑1 (MQ=255)

                                                                                                                                         cTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGaaaa   <  2:1475230/149‑1 (MQ=255)

                                                                                                                                          tGTTCA‑GTTGCCTGCCAGGCTAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGGTATCCTGTGTATCTGGGTTATCAGCGAAAAg  <  2:1475232/149‑1 (MQ=255)

                                                                                                                                          tGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGCCAGTTGATAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTTTCCTGTGTATCTGGGTTATCAGCGAAAAg  >  2:1475445/1‑149 (MQ=255)

TTAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAG  >  U00096/1618662‑1618949

Alignment Legend
Aligned base mismatch/match (shaded by quality score): `ATCG/ATCG` `< 3 ≤` `ATCG/ATCG` `< 14 ≤` `ATCG/ATCG` `< 27 ≤` `ATCG/ATCG` `< 36 ≤` `ATCG/ATCG`
Unaligned base: `atcg` Masked matching base: `atcg` Alignment gap: `‑` Deleted base: `‑`