New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? U00096 2817923 =169 (0.610)6 (0.030) 5/252 33.0 3.8% intergenic (‑63/+136) argQ/argZ tRNA‑Arg/tRNA‑Arg
?U00096 = 2818057 162 (0.680)intergenic (‑197/+2) argQ/argZ tRNA‑Arg/tRNA‑Arg
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 173 total aligned reads displayed.

CGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCG  >  U00096/2817775‑2818069
                                                                                                                                                    |                                                                                                                                                  
cGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAgaga                                                                                                                                                    <  1:2609237/149‑1 (MQ=255)
cGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAgaga                                                                                                                                                    <  2:2609238/149‑1 (MQ=255)
 ggAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGAt                                                                                                                                                   <  2:2609240/149‑1 (MQ=255)
  gagaATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGAt                                                                                                                                                   <  1:2609241/148‑1 (MQ=255)
   agaATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATgg                                                                                                                                                 <  2:2609243/149‑1 (MQ=255)
     aaTATGGTGCATCCGGGAGGATTCGAAGCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTg                                                                                                                                               <  1:2609246/149‑1 (MQ=255)
        atGGTGCATCCGGGAGGATTCGAACCTACGACCCCACGGTTCGTAGCCGAGTACTCTAAACAGCTGAGCTACGGATGCATAGGGAAAACTTAGTCTACTGCTGATATTGATACCGATACTAAAGCCATATCAATTAAGAGATGGTGCAt                                                                                                                                            >  2:2609303/1‑149 (MQ=14)
         tGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATc                                                                                                                                           <  1:2609248/149‑1 (MQ=255)
          gttGCAGCCGGGAGGATTCGAACCTCCGACCGCTCGGCTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATCCCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATcc                                                                                                                                          <  2:2609249/147‑1 (MQ=255)
            tccATCCGGGAGCATTCCAACCTCCGACCGCTCGGTGCGTAGCCGTGTACTCTATCGAGCTGAGCTACGGATGCATCGGGAACCCTTATTCTCCTGCTGATTTTGATACCGCTACTAACGCCATTTCTATTACGAGATGGTGCATCCgg                                                                                                                                        <  2:2609251/147‑1 (MQ=14)
             gCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCggg                                                                                                                                       <  2:2609253/149‑1 (MQ=255)
             gCATCCGGGAGGATTCGAACCTCCGACCCCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATAGGGAAAACTTATTCTACTGCTGATATTGATACCGATACTAAAGCCATATCAATTAAGAGATGGTGCATCCggg                                                                                                                                       >  1:2609302/1‑149 (MQ=255)
              cATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGgga                                                                                                                                      <  1:2609254/149‑1 (MQ=255)
              cATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGgga                                                                                                                                      <  2:2609255/149‑1 (MQ=255)
                tCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGggagg                                                                                                                                    >  1:2609356/1‑149 (MQ=255)
                tCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGggagg                                                                                                                                    >  1:2609308/1‑149 (MQ=255)
                    ggaggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTa                                                                                                                                >  2:2609295/1‑149 (MQ=255)
                    ggaggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTa                                                                                                                                >  2:2609296/1‑149 (MQ=255)
                      aggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACt                                                                                                                              <  2:2609259/149‑1 (MQ=255)
                       ggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTa                                                                                                                                >  1:2609297/1‑146 (MQ=255)
                        gaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCg                                                                                                                            >  2:2609310/1‑149 (MQ=255)
                           tCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCt                                                                                                                         >  2:2609314/1‑149 (MQ=255)
                            cGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCtt                                                                                                                        <  1:2609260/149‑1 (MQ=255)
                                 cTCCGACCGCTCGTTTCGTATCCGTGTACTCTCTCCAGCTCAGCTACGCATGCATCGGGAAAAGTTTTTCTACTGCTGATATTGATACCGCTACTAAAGCAATTTTAATTATTAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGc                                                                                                                   <  2:2609264/149‑1 (MQ=17)
                                      aCCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGAt                                                                                                                                                   <  1:2609266/112‑1 (MQ=255)
                                        cGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGc                                                                                                               >  1:2609351/1‑146 (MQ=255)
                                         gCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTAc                                                                                                                               >  1:2609315/1‑129 (MQ=255)
                                         gCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCtt                                                                                                           >  2:2609382/1‑149 (MQ=255)
                                           tCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTc                                                                                                          >  1:2609311/1‑148 (MQ=255)
                                              gTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGc                                                                                                      <  2:2609268/149‑1 (MQ=255)
                                               ttCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGcc                                                                                                     >  2:2609340/1‑149 (MQ=255)
                                               ttCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGcc                                                                                                     >  1:2609365/1‑149 (MQ=255)
                                                 cGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCg                                                                                                         <  1:2609270/143‑1 (MQ=255)
                                                     gCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCAATGCGGCTCGCCCATCGGGCCGTTGc                                                                                                >  1:2609363/1‑148 (MQ=255)
                                                       cGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGAAACCGCTACTAAAGCCATCTCAATTAATAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTaa                                                                                             <  2:2609271/149‑1 (MQ=255)
                                                           tACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCa                                                                                         >  2:2609312/1‑149 (MQ=255)
                                                              tctATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACg                                                                                      >  2:2609373/1‑149 (MQ=255)
                                                                tATCCAGCTCAGCTACGGATGCATCGGGAACTCTTATCCTACCTCTGATATTCCTACCGCTCCTACAGCCAGCTCACTTACCAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGtt                                                                                    <  2:2609273/149‑1 (MQ=17)
                                                                   cccgCTGAGCTACGGACGCAACGGGAAAACTTATTCTACTGCTGATATTGAAACCGCTACTACAGCCATCTCAATTACTAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTatc                                                                                 <  2:2609275/146‑1 (MQ=17)
                                                                   ccAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTACAGCCATATCAATTAATAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTatc                                                                                 <  2:2609276/149‑1 (MQ=255)
                                                                     aGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTatcat                                                                               >  1:2609293/1‑149 (MQ=255)
                                                                         gAGCTACGTCTGCATCGTGAAAACTTATTCTACTGCTTATAATGATACCTCTACTAAAGCCATATTAATTATCAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTatcat                                                                               <  1:2609280/145‑1 (MQ=18)
                                                                         gAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCAACCCt                                                                           >  2:2609388/1‑149 (MQ=255)
                                                                          aGCTACGGATGCATCGGGAATACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAATAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTa                                                                          <  2:2609282/149‑1 (MQ=255)
                                                                            cTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGt                                                                        <  1:2609283/149‑1 (MQ=255)
                                                                              aCGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCTCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGc                                                                      >  2:2609358/1‑149 (MQ=255)
                                                                                   tGCATCGGGAAACCTTCATCTTCGGCTGATATTGTTAACGCTACTAAAGCCATCTTAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCg                                                                 <  2:2609285/149‑1 (MQ=17)
                                                                                    gCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTg                                                                       >  1:2609412/1‑142 (MQ=255)
                                                                                       tCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCGTGCCGCTCGCCGTACGGGCCGTTGCTAAAGCAACGATATCCTCCCTGGTGCCAGCGGTTat                                                            >  2:2609738/1‑148 (MQ=11)
                                                                                        cGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTa                                                             <  1:2609287/148‑1 (MQ=255)
                                                                                         gggAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAgaga                                                                                                                                                    >  2:2609515/1‑60 (MQ=255)
                                                                                          ggAAAACTTATTCTCCTGCTGATATTGATACCGCTACTACAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAAtt                                                          <  2:2609289/149‑1 (MQ=255)
                                                                                           gAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAGGCCATATCAAGTAAGAGATGGTGCATCCGgga                                                                                                                                      <  2:2609288/72‑1 (MQ=255)
                                                                                           gAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCATTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGAAACGTTATCATCCCTAGTGCCTGCGGTTAATTc                                                         >  2:2609396/1‑149 (MQ=255)
                                                                                             aaaCTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTc                                                                                                                             >  1:2609317/1‑79 (MQ=255)
                                                                                               acatATCCTCCTGCTCATCTTCACACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCt                                                     <  2:2609306/146‑1 (MQ=14)
                                                                                               aCTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCt                                                     <  2:2609291/149‑1 (MQ=255)
                                                                                                 ttATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGgga                                                                                                                                      >  1:2609519/1‑66 (MQ=40)
                                                                                                      cTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCtt                                              <  2:2609293/149‑1 (MQ=255)
                                                                                                      cTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCtt                                              >  1:2609395/1‑149 (MQ=255)
                                                                                                       tACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTc                                             <  1:2609295/149‑1 (MQ=255)
                                                                                                         ctgctgATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGa                                           <  2:2609298/149‑1 (MQ=255)
                                                                                                          tgctgATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACt                                                                                                                              >  1:2609394/1‑65 (MQ=40)
                                                                                                          tgctgATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGAt                                          >  1:2609377/1‑149 (MQ=255)
                                                                                                           gctgATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                 >  1:2609528/1‑61 (MQ=35)
                                                                                                            ctgATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCATACTGGCCGTTGCTAAAGCAACGTTatcc                                                                                >  2:2609659/1‑108 (MQ=11)
                                                                                                                tatTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTc                                    >  1:2609381/1‑149 (MQ=255)
                                                                                                                tatTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTc                                    >  2:2609300/1‑149 (MQ=255)
                                                                                                                  ttGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCAt                                  >  1:2609402/1‑149 (MQ=255)
                                                                                                                     aTACCGCTACTAATGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGc                               <  1:2609303/149‑1 (MQ=255)
                                                                                                                     aTACCGCTACTAAAGCCATATCAATTACGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGc                               <  2:2609304/149‑1 (MQ=255)
                                                                                                                      tACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCt                              <  1:2609305/149‑1 (MQ=255)
                                                                                                                            tactaAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGAt                        <  2:2609308/149‑1 (MQ=255)
                                                                                                                              ctaAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGAttt                      <  1:2609310/149‑1 (MQ=255)
                                                                                                                               taAAGCCATATCAATTAAGAGATGGTGCATCCGggagga                                                                                                                                   >  1:2609538/1‑39 (MQ=40)
                                                                                                                               taAAGCCATATCAATTAAGAGATGGTGCATCCGggagga                                                                                                                                   <  2:2609538/39‑1 (MQ=40)
                                                                                                                               taAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGAttc                                                                                                                                <  2:2609537/42‑2 (MQ=25)
                                                                                                                               taAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTc                                                                                                                             >  1:2609459/1‑45 (MQ=255)
                                                                                                                                 aaGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTAGCCCTTCGGGCCGTTTAAAAATAAAAGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCgg                   >  2:2609461/1‑149 (MQ=18)
                                                                                                                                  aGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCgg                   <  1:2609313/148‑1 (MQ=255)
                                                                                                                                   gCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGgag                 >  2:2609436/1‑149 (MQ=255)
                                                                                                                                     cATATCAATTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                 >  1:2609542/1‑35 (MQ=40)
                                                                                                                                       tatCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAata             >  1:2609398/1‑149 (MQ=255)
                                                                                                                                       tatCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAata             <  2:2609316/149‑1 (MQ=255)
                                                                                                                                       tatCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCGTCGATACCTTCAGTGCTGAAGATTTCGGAGAata             >  1:2609470/1‑149 (MQ=255)
                                                                                                                                        atCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAatat            >  2:2609448/1‑149 (MQ=255)
                                                                                                                                         tCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATg           <  2:2609317/149‑1 (MQ=255)
                                                                                                                                           aaTTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGt         <  1:2609319/149‑1 (MQ=255)
                                                                                                                                            aTTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTg        <  2:2609320/149‑1 (MQ=255)
                                                                                                                                               atgagaTGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCa      <  1:2609321/146‑1 (MQ=255)
                                                                                                                                               aaGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCAt     >  1:2609451/1‑149 (MQ=255)
                                                                                                                                                agagATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGc       >  1:2609405/1‑146 (MQ=255)
                                                                                                                                                 gagaTGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTACAGCAACGTTATCTTCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATcc   <  2:2609322/149‑1 (MQ=255)
                                                                                                                                                  agaTGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATccc                                                                            <  1:2609325/75‑1 (MQ=34)
                                                                                                                                                  agaTGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTa                                                                          <  1:2609333/77‑1 (MQ=35)
                                                                                                                                                  agaTGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCg  <  1:2609340/149‑1 (MQ=255)
                                                                                                                                                  agaTGGTGCATCCGGGAGGATTACTCGCCATGCGGCTCGCCATTCGGGCCGATGCTAAAGCAACGATATCATCCCTAGTGCATGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGAGTTCGGAGAATATGGTGCATCCg  >  2:2609480/1‑149 (MQ=17)
                                                                                                                                                    aTGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCTACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTa                                                    <  1:2609348/97‑1 (MQ=255)
                                                                                                                                                    aTGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAg                                                                         <  1:2609344/76‑1 (MQ=38)
                                                                                                                                                    aTGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCg                    <  1:2609347/129‑1 (MQ=255)
                                                                                                                                                    |                                                                                                                                                  
CGGAGAATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAACTTATTCTACTGCTGATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTACTCGCCTTGCGGCTCGCCCTTCGGGCCGTTGCTAAAGCAACGTTATCATCCCTAGTGCCTGCGGTTAATTCCGCTACCTCTTCGATACCTTCATTGCTGAAGATTTCGGAGAATATGGTGCATCCG  >  U00096/2817775‑2818069

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.