New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? U00096 2817670 =315 (1.150)10 (0.040) 7/292 33.8 4.8% intergenic (‑167/+114) yqaB/argQ fructose‑1‑phosphate phosphatase YqaB/tRNA‑Arg
?U00096 = 2818216 83 (0.300)noncoding (59/77 nt) argY tRNA‑Arg
Rejected: Coverage evenness skew score above cutoff.
Rejected: Frequency below/above cutoff threshold.

Only 100 of 113 total aligned reads displayed.

CGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCC  >  U00096/2818068‑2818364
                                                                                                                                                    |                                                                                                                                                    
cGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609650/1‑149 (MQ=40)
             aCCTCCCACCGCTCGGAGCGCAGCCCAGAACGCTATCCAGCTCAGCACCCCCTGCACCGGGAAATTTAAATTCCTCCTCATCTTGCTACCGCTACTACCGCCATATCACGTACCAGATGGTGCATCCGGGAGGATTCGAACCTCCGAcc                                                                                                                                         <  2:2609534/149‑1 (MQ=12)
                                          aCTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAg                                                                                                                            >  1:2609506/1‑133 (MQ=255)
                                                         gCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtta                                                                                                                                                     >  1:2609651/1‑92 (MQ=255)
                                                              ggATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCg                                                                                        >  2:2609512/1‑149 (MQ=255)
                                                              ggATGCATAGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCg                                                                                        >  1:2609520/1‑149 (MQ=255)
                                                                 tGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609695/1‑84 (MQ=255)
                                                                    aTCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAttac                                                                                                                                                    >  1:2609666/1‑81 (MQ=255)
                                                                    aTCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAttac                                                                                                                                                    >  1:2609660/1‑81 (MQ=255)
                                                                    aTCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtta                                                                                                                                                     >  1:2609656/1‑81 (MQ=255)
                                                                    aTCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609671/1‑81 (MQ=255)
                                                                     tCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609677/1‑80 (MQ=255)
                                                                     tCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609670/1‑80 (MQ=255)
                                                                           aaTTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609703/1‑74 (MQ=255)
                                                                            atttatttTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609757/1‑73 (MQ=255)
                                                                             tttatttTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAttac                                                                                                                                                    >  1:2609722/1‑72 (MQ=38)
                                                                              ttatttTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACttactttact                                                                        <  2:2609520/149‑1 (MQ=255)
                                                                               tatttTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609645/1‑70 (MQ=40)
                                                                               tatttTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCCAACCTCAGACCCAACCGATCGTAGCCGAGTACTCTATCAAGCTGAGCTACGGATGCAAAGGGAAACttacattacag                                                                       >  2:2609713/1‑147 (MQ=21)
                                                                                 ttttACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609840/1‑68 (MQ=40)
                                                                                  tttACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609736/1‑67 (MQ=39)
                                                                                  tctACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCCAACCTAAGACCCAAGCCTTCGTAGCCGAGTActct                                                                                                                 >  2:2609523/3‑104 (MQ=14)
                                                                                   ttACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609715/1‑66 (MQ=37)
                                                                                    tACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTActc                                                                                                                  <  1:2609523/101‑1 (MQ=255)
                                                                                     aCTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609524/1‑64 (MQ=35)
                                                                                     aCTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCg                                                                                                                                    >  1:2609525/1‑82 (MQ=255)
                                                                                     aCTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCg                                                                                                                                    <  2:2609525/82‑1 (MQ=255)
                                                                                      ctgctgATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTc                                                                                                                                                     >  1:2609764/1‑64 (MQ=37)
                                                                                      ctgctgATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTActct                                                                                                                 >  1:2609526/1‑100 (MQ=255)
                                                                                         ctgATATTGATACCGCTACTAAAGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCg                                                                                                                                            >  1:2609529/1‑70 (MQ=255)
                                                                                         ctgATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCg                                                                                                                                            <  2:2609529/70‑1 (MQ=255)
                                                                                          tgATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTg                                                            >  1:2609629/1‑149 (MQ=255)
                                                                                            atatTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609752/1‑57 (MQ=35)
                                                                                             tatTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609683/1‑56 (MQ=35)
                                                                                              atTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609643/1‑55 (MQ=35)
                                                                                              atTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTccgcccgc                                                                                                                                       >  1:2609841/1‑70 (MQ=255)
                                                                                               ttGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGTATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATAcc                                                       <  1:2609532/149‑1 (MQ=255)
                                                                                                  aTACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGAcc                                                                                                                                         <  2:2609524/64‑1 (MQ=255)
                                                                                                   tACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTg                                                                                                        >  1:2609844/1‑96 (MQ=255)
                                                                                                    aCCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATg                                                                                             >  1:2609535/1‑106 (MQ=255)
                                                                                                     ccGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAttac                                                                                                                                                    >  1:2609691/1‑48 (MQ=17)
                                                                                                       gCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      <  1:2609702/46‑1 (MQ=38)
                                                                                                       gCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  2:2609702/1‑46 (MQ=38)
                                                                                                        ctactaAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609710/1‑45 (MQ=38)
                                                                                                         tactaAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAttac                                                                                                                                                    >  1:2609705/1‑44 (MQ=17)
                                                                                                         tactaAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTa                                                                                                                             >  1:2609536/1‑69 (MQ=255)
                                                                                                         tactaAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTa                                                                                                                             <  2:2609536/69‑1 (MQ=255)
                                                                                                           ctaTAGCCATATCTAGTATTATATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGcc                                           <  1:2609539/149‑1 (MQ=17)
                                                                                                           ctaAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCgg                                                                                                                                   <  2:2609528/61‑1 (MQ=255)
                                                                                                              aaGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGAcc                                                                                                                                         <  1:2609540/52‑1 (MQ=255)
                                                                                                              aaGCCATATCAATTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGAcc                                                                                                                                         >  2:2609540/1‑52 (MQ=255)
                                                                                                              aaGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGa                                                                                                       >  1:2609846/1‑86 (MQ=255)
                                                                                                              aaGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGc                                                                                            >  1:2609544/1‑97 (MQ=255)
                                                                                                                gCCATATCAAGTAAGAGATGGTGCATCCGGGAGGAtt                                                                                                                                                      >  1:2609723/1‑37 (MQ=40)
                                                                                                                gCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTc                                                                                                                                                     <  1:2609541/38‑1 (MQ=255)
                                                                                                                gCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTc                                                                                                                                                     >  2:2609541/1‑38 (MQ=255)
                                                                                                                   atatCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCg                                                                                                                                        >  2:2609848/1‑48 (MQ=255)
                                                                                                                           tAAGAGATGGTGCATCCGGGAGGATTCGAACCTcc                                                                                                                                             <  2:2609542/35‑1 (MQ=255)
                                                                                                                            aaGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGc                                                                                                          <  1:2609545/69‑1 (MQ=39)
                                                                                                                            aaGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGc                                                                                                          >  2:2609545/1‑69 (MQ=39)
                                                                                                                             gtatattgTGCTTCCGGGTGGATTCGAACCTCCGAGCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGATACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATgg                         <  2:2609603/142‑1 (MQ=17)
                                                                                                                             gaataTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATgg                         <  2:2609556/145‑1 (MQ=255)
                                                                                                                             gaataTGGTGCATCCGGGAGGAGTCGAACCTCCGACCGCGCGGTGCGTCGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATgg                         <  2:2609576/145‑1 (MQ=14)
                                                                                                                               ataTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAactt                                                                                <  1:2609551/90‑1 (MQ=14)
                                                                                                                               ataTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGc                                                                      >  1:2609582/3‑102 (MQ=18)
                                                                                                                               ataTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGc                                                                      >  1:2609580/3‑102 (MQ=18)
                                                                                                                               ataTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTaa                                               <  1:2609554/123‑1 (MQ=255)
                                                                                                                               ataTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGt                        <  1:2609549/146‑1 (MQ=255)
                                                                                                                               agaTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGtt                                                                                                                                 <  1:2609550/43‑1 (MQ=35)
                                                                                                                               agaTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCg                                                                                                                         <  1:2609552/51‑1 (MQ=33)
                                                                                                                               agaTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGa                                                                                                       <  1:2609548/69‑1 (MQ=33)
                                                                                                                                taTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAact                                                                                 <  1:2609558/89‑1 (MQ=14)
                                                                                                                                taTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGc                                                                      >  1:2609546/2‑101 (MQ=25)
                                                                                                                                taTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGc                      <  2:2609560/148‑1 (MQ=255)
                                                                                                                                 aTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAacttactt                                                                            <  1:2609568/94‑1 (MQ=37)
                                                                                                                                 aTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAacttactt                                                                            <  1:2609590/94‑1 (MQ=37)
                                                                                                                                 aTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCa                                                                     <  1:2609562/101‑1 (MQ=38)
                                                                                                                                 aTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGAtttttt                                                             <  1:2609593/109‑1 (MQ=255)
                                                                                                                                 aTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGctact                                                 <  1:2609584/121‑1 (MQ=255)
                                                                                                                                 aTGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGc                                            <  1:2609573/126‑1 (MQ=255)
                                                                                                                                   ggTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCTTCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATc                   <  1:2609595/149‑1 (MQ=255)
                                                                                                                                   ggTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATc                   >  1:2609634/1‑149 (MQ=255)
                                                                                                                                       cATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGct                                                    <  1:2609598/112‑1 (MQ=255)
                                                                                                                                        aTCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGAt                                                                  >  1:2609597/1‑97 (MQ=40)
                                                                                                                                        aTCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGTTGCATCCGgga              >  2:2609596/1‑149 (MQ=255)
                                                                                                                                         tCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGggag             >  2:2609718/1‑149 (MQ=255)
                                                                                                                                         tCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGggag             >  2:2609711/1‑149 (MQ=255)
                                                                                                                                          ccGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGggagg            >  2:2609698/1‑149 (MQ=255)
                                                                                                                                           cGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAg                                             <  1:2609606/115‑1 (MQ=255)
                                                                                                                                            gggAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAacttactt                                                                            <  1:2609604/83‑1 (MQ=38)
                                                                                                                                            gggAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAacttaatt                                                                            >  2:2609604/1‑83 (MQ=18)
                                                                                                                                            gggAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTa                                        >  1:2609605/1‑119 (MQ=255)
                                                                                                                                            gggAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTa                                        <  2:2609605/119‑1 (MQ=255)
                                                                                                                                            gggAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGAt          >  1:2609734/1‑149 (MQ=255)
                                                                                                                                            gggAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAAATTAATTTACTGCAGATTTTT‑‑ATAAACCTCCTAAAGCCCAGTAAAGTAAGACATGGTGGAGCCAGGAGGATTa        >  2:2609606/1‑149 (MQ=11)
                                                                                                                                             ggaggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGc                                                                      >  1:2609607/1‑88 (MQ=38)
                                                                                                                                               aggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTAc       >  2:2609652/1‑149 (MQ=255)
                                                                                                                                                ggaTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACt      >  2:2609637/1‑149 (MQ=255)
                                                                                                                                                  aTTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCggg               <  1:2609608/138‑1 (MQ=255)
                                                                                                                                                    tCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGcc  >  2:2609617/1‑149 (MQ=255)
                                                                                                                                                    |                                                                                                                                                    
CGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAATTTATTTTACTGCTGATATTGATACCGCTACTAAAGCCATATCAAGTAAGAGATGGTGCATCCGGGAGGATTCGAACCTCCGACCGCTCGGTTCGTAGCCGAGTACTCTATCCAGCTGAGCTACGGATGCATCGGGAAACTTACTTTACTGCAGATTTTTTGATACCGCTACTAAAGCCGTATCAAGTAAGAGATGGTGCATCCGGGAGGATTACTCGCC  >  U00096/2818068‑2818364

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.