Predicted mutation
evidence seq id position mutation annotation gene description
MC JC U00096 4,118,499 Δ3,339 bp zapB[hslV] zapB, rraA, menA, hslU, [hslV]

Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ U00096 4118499 4121837 3339 271 [0] [0] 271 zapB–[hslV] zapB,rraA,menA,hslU,[hslV]

New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? U00096 = 41184980 (0.000)250 (0.970) 155/274 0.3 100% intergenic (‑408/‑17) glpF/zapB glycerol facilitator/cell division factor ZapB
?U00096 4121838 = 0 (0.000)coding (450/531 nt) hslV peptidase component of the HslVU protease

Only 100 of 271 total aligned reads displayed.

GCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGGAGATCCTTACGCTTTGTAGCTTAATTCTTCGATGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGCGATGCAGTT  >  U00096/4121691‑4121985
                                                                                                                                                   |                                                                                                                                                   
tgaaaagtgtggcaatccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttatttaggcgtcaccggtaatcgggacgaggagttttatccatcaacgccttt                                                                                                                                                     >  1:3896514‑M2/148‑148 (MQ=255)
tgaaaagtgtggcaaaccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgcctttt                                                                                                                                                    >  2:3896523‑M2/148‑149 (MQ=255)
 gaaaagtgtggcaaaccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTc                                                                                                                                                   <  1:3896318‑M2/3‑1 (MQ=255)
  aaaagtgtggcaaaccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTc                                                                                                                                                   >  1:3896503‑M2/146‑148 (MQ=255)
  aaaagtgtggcaaaccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCa                                                                                                                                                  <  1:3896321‑M2/4‑1 (MQ=255)
  aaaagtgtggcaaaccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCa                                                                                                                                                  <  2:3896319‑M2/4‑1 (MQ=255)
   aaagtgtggcaaaccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAg                                                                                                                                                 <  2:3896324‑M2/5‑1 (MQ=255)
     agtgtggcaaaccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCa                                                                                                                                               <  1:3896327‑M2/7‑1 (MQ=255)
       tgtggcaaaccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAAt                                                                                                                                             >  1:3896500‑M2/141‑149 (MQ=255)
         tggcaaaccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAAttt                                                                                                                                           >  1:3896489‑M2/139‑149 (MQ=255)
           gcaaaccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatctgagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCa                                                                                                                                         >  2:3896396‑M2/137‑149 (MQ=255)
           gcaaaccgtaatctgcaaggcgcgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtagttattaaggcggcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCa                                                                                                                                         <  2:3896331‑M2/13‑1 (MQ=255)
             aaaccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACg                                                                                                                                       <  1:3896333‑M2/15‑1 (MQ=255)
              aaccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACgg                                                                                                                                      >  2:3896432‑M2/134‑149 (MQ=255)
              aaccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACgg                                                                                                                                      <  1:3896335‑M2/16‑1 (MQ=255)
               accgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTc                                                                                                                                          >  1:3896464‑M2/133‑144 (MQ=255)
                ccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGgc                                                                                                                                    >  2:3896548‑M2/132‑149 (MQ=255)
                ccgtaatctgcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGgc                                                                                                                                    <  2:3896337‑M2/18‑1 (MQ=255)
                         gcaaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTc                                                                                                                           <  2:3896342‑M2/27‑1 (MQ=255)
                          caaggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCa                                                                                                                          <  2:3896344‑M2/28‑1 (MQ=255)
                            aggcgtgccgctggacagctatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggatgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAgt                                                                                                                        <  1:3896345‑M2/30‑1 (MQ=255)
                             ggcgtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAgtg                                                                                                                       <  2:3896348‑M2/31‑1 (MQ=255)
                                gtgccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagggcgctcgtatttattaaggcgtcaccggtaatcgggtcgaggatttttatccttcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGttt                                                                                                                    <  1:3896351‑M2/34‑1 (MQ=255)
                                  gccgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgaatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGtttt                                                                                                                   <  1:3896354‑M2/35‑1 (MQ=255)
                                    cgctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTa                                                                                                                <  2:3896357‑M2/38‑1 (MQ=255)
                                      ctggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAAc                                                                                                              <  1:3896359‑M2/40‑1 (MQ=255)
                                       tggacagcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggaattttatccatcaacgccttTTCAGCAATTTCACCGGCGCTAAGATAAGTGTTTTCTAACa                                                                                                             >  2:3896483‑M2/109‑149 (MQ=255)
                                            agcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTc                                                                                                                  >  1:3896407‑M2/104‑139 (MQ=255)
                                             gcgatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgc                                                                                                       <  2:3896364‑M2/47‑1 (MQ=255)
                                               gatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgc                                                                                                     <  1:3896365‑M2/49‑1 (MQ=255)
                                               gatggcgcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgc                                                                                                     <  2:3896367‑M2/49‑1 (MQ=255)
                                                 tggcgcggcttcatacaatcggagctaacttaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCTCTAAGTTCAGTGTTTTCTAACAgcgcgcgcgc                                                                                                   <  2:3896372‑M2/51‑1 (MQ=255)
                                                     gcggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCa                                                                                               >  2:3896469‑M2/95‑149 (MQ=255)
                                                      cggcttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAg                                                                                              <  1:3896374‑M2/56‑1 (MQ=255)
                                                         cttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGttt                                                                                                                    <  1:3896376‑M2/34‑1 (MQ=255)
                                                         cttcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCt                                                                                           >  2:3896515‑M2/91‑149 (MQ=255)
                                                          ttcatacaatcggagctaactaaagtgcgctagtatttattaaggcgtcaccggtaaacgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTg                                                                                          >  1:3896557‑M2/90‑149 (MQ=255)
                                                           tcatacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcgcgc                                                                                                     <  1:3896379‑M2/49‑1 (MQ=255)
                                                            catacaatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTggg                                                                                        >  2:3896502‑M2/88‑149 (MQ=255)
                                                             atacaatcggagctaactaaagtgcgctcgtatttattaaggcggcaccggtaatcgggacgaggagttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGc                                                                                       <  2:3896381‑M2/63‑1 (MQ=255)
                                                                 aatcggagctaactaaagtgcgctcgtatttattaatgcgtcaccggtaatcgggacgaggagttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTGTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGGaa                                                                                   >  2:3896618‑M2/83‑149 (MQ=255)
                                                                 aatcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTaa                                                                                   <  1:3896383‑M2/67‑1 (MQ=255)
                                                                   tcggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAgg                                                                                 <  2:3896386‑M2/69‑1 (MQ=255)
                                                                    cggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAggg                                                                                <  2:3896419‑M2/70‑1 (MQ=255)
                                                                     ggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAgcgcg                                                                                                        >  1:3896388‑M2/79‑124 (MQ=255)
                                                                     ggagctaactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGgc                                                                               <  2:3896434‑M2/71‑1 (MQ=255)
                                                                          taactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGccgccg                                                                          <  2:3896461‑M2/76‑1 (MQ=255)
                                                                           aactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCgg                                                                         >  2:3896508‑M2/73‑149 (MQ=255)
                                                                           aactaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCgg                                                                         <  2:3896409‑M2/77‑1 (MQ=255)
                                                                            actaaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCgg                                                                         >  1:3896471‑M2/72‑148 (MQ=255)
                                                                              taaagtgcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGc                                                                      <  1:3896431‑M2/80‑1 (MQ=255)
                                                                                    gcgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAg                                                                <  1:3896403‑M2/86‑1 (MQ=255)
                                                                                     cgctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGc                                                               <  2:3896449‑M2/87‑1 (MQ=255)
                                                                                      gctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCa                                                              <  1:3896425‑M2/88‑1 (MQ=255)
                                                                                       ctcgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCaa                                                             >  1:3896479‑M2/61‑149 (MQ=255)
                                                                                         cgtatttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATa                                                           >  1:3896518‑M2/59‑149 (MQ=255)
                                                                                             tttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGAt                                                       <  1:3896416‑M2/95‑1 (MQ=255)
                                                                                              ttattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATa                                                           >  2:3896478‑M2/54‑144 (MQ=255)
                                                                                              ttattaaggcgtcaccggtaatcgggacgaggagttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATc                                                      <  1:3896397‑M2/96‑1 (MQ=255)
                                                                                               tattaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATa                                                           >  2:3896526‑M2/53‑143 (MQ=255)
                                                                                                attaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGt                                                    <  2:3896421‑M2/98‑1 (MQ=255)
                                                                                                attaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGt                                                    >  2:3896584‑M2/52‑149 (MQ=255)
                                                                                                attaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGt                                                    <  1:3896441‑M2/98‑1 (MQ=255)
                                                                                                 ttaaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGtt                                                   <  1:3896401‑M2/99‑1 (MQ=255)
                                                                                                 ttaaggcggcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGtt                                                   <  1:3896451‑M2/99‑1 (MQ=255)
                                                                                                  taaggcgtcaccggtaatcgggacgaggatgtttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATACGATCGttt                                                  <  2:3896391‑M2/100‑1 (MQ=255)
                                                                                                   aaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGtttt                                                 <  1:3896448‑M2/101‑1 (MQ=255)
                                                                                                   aaggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGtttt                                                 <  1:3896456‑M2/101‑1 (MQ=255)
                                                                                                    aggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTc                                                <  2:3896438‑M2/102‑1 (MQ=255)
                                                                                                    aggcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTc                                                <  2:3896442‑M2/102‑1 (MQ=255)
                                                                                                      gcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTg                                              <  2:3896406‑M2/104‑1 (MQ=255)
                                                                                                      gcgtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTg                                              >  2:3896571‑M2/46‑149 (MQ=255)
                                                                                                        gtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGc                                            <  2:3896426‑M2/106‑1 (MQ=255)
                                                                                                        gtcaccggtaatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGc                                            <  2:3896454‑M2/106‑1 (MQ=255)
                                                                                                                taatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGcaccac                                    <  2:3896458‑M2/114‑1 (MQ=255)
                                                                                                                taatcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGcaccac                                    <  1:3896429‑M2/114‑1 (MQ=255)
                                                                                                                  atcgggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGt                                  >  2:3896493‑M2/34‑149 (MQ=255)
                                                                                                                     gggacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCAc                               >  2:3896577‑M2/31‑149 (MQ=255)
                                                                                                                       gacgaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACgtccc                               <  1:3896394‑M2/119‑3 (MQ=255)
                                                                                                                          gaggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTa                          >  2:3896413‑M2/26‑149 (MQ=255)
                                                                                                                           aggatttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTAc                         >  1:3896543‑M2/25‑149 (MQ=255)
                                                                                                                              atttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTa                          >  1:3896507‑M2/22‑145 (MQ=255)
                                                                                                                              atttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCgg                      >  2:3896528‑M2/22‑149 (MQ=255)
                                                                                                                               tttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGt                     >  2:3896573‑M2/21‑149 (MQ=255)
                                                                                                                                ttttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtg                    >  2:3896598‑M2/20‑149 (MQ=255)
                                                                                                                                 tttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtga                   >  1:3896631‑M2/19‑149 (MQ=255)
                                                                                                                                  ttatccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGtgat                  <  1:3896413‑M2/132‑1 (MQ=255)
                                                                                                                                      ccatcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATa              <  1:3896420‑M2/136‑1 (MQ=255)
                                                                                                                                       catcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATaa             <  2:3896446‑M2/137‑1 (MQ=255)
                                                                                                                                         tcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCTCGCGCGCCGCAGCCTGGGCGTAAGGTCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGc           >  2:3896545‑M2/11‑149 (MQ=255)
                                                                                                                                         tcaacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGc           >  2:3896566‑M2/11‑149 (MQ=255)
                                                                                                                                          caacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGCg          >  2:3896559‑M2/10‑149 (MQ=255)
                                                                                                                                           aacgccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGCGa         >  1:3896608‑M2/9‑149 (MQ=255)
                                                                                                                                              gccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGCGATGc      >  2:3896533‑M2/6‑149 (MQ=255)
                                                                                                                                              gccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGCGATGc      <  2:3896465‑M2/144‑1 (MQ=255)
                                                                                                                                               ccttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGCGATGCa     >  1:3896595‑M2/5‑149 (MQ=255)
                                                                                                                                                cttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGCGATGCAg    >  1:3896553‑M2/4‑149 (MQ=255)
                                                                                                                                                 ttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGCGATGCAGt   >  1:3896535‑M2/3‑149 (MQ=255)
                                                                                                                                                 ttTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGCGATGCAGt   >  1:3896581‑M2/3‑149 (MQ=255)
                                                                                                                                                  tTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGGGATGCTAAGCGATGCAGtt  >  2:3896633‑M2/2‑149 (MQ=255)
                                                                                                                                                   |                                                                                                                                                   
GCCGATGATGTGCTTATCCAGTTCGCTGACGATTTCGCGTGGGGTCATTTCAGACATGGGAGATCCTTACGCTTTGTAGCTTAATTCTTCGATGGTGTGGAAATGGTTGGTATAGATGCAAATGTCGCCTGCAATATCCAACGCCTTTTCAGCAATTTCACGGGCGCTAAGTTCAGTGTTTTCTAACAGCGCGCGCGCCGCAGCCTGGGCGTAAGGGCCGCCGGAGCCGATAGCAATAAGATCGTTTTCTGGCTGCACCACGTCACCGTTACCGGTGATGATAAGCGATGCAGTT  >  U00096/4121691‑4121985

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: 
Reads not counted as support for junction
read_name Not counted due to insufficient overlap past the breakpoint.
read_name Not counted due to not crossing MOB target site duplication.