| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | U00096 | 1,618,806 | Δ1 bp | coding (103/666 nt) | marC ← | inner membrane protein MarC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | U00096 | 1,618,806 | 0 | T | . | 99.4% | 830.7 / ‑1.5 | 176 | coding (103/666 nt) | marC | inner membrane protein MarC |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base . (90/84); total (91/85) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.86e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 9.57e-01 | |||||||||||
Only 100 of 176 total aligned reads displayed.
TTAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGT > U00096/1618662‑1618950 | ttAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCACCGACTGACGATTACGTTCGGCACTGTTCA‑GTtgc > 1:1046915/1‑149 (MQ=255)ttAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTtgc > 2:1046913/1‑149 (MQ=255) tAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTtgcc < 2:1046789/149‑1 (MQ=255) aGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTtgcctg < 1:1046791/149‑1 (MQ=255) ccgccTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTtgcctgcc < 2:1046792/149‑1 (MQ=255) cgccTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCa < 2:1046793/149‑1 (MQ=255) gccTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAg > 2:1046899/1‑149 (MQ=255) gccTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAg > 1:1046866/1‑149 (MQ=255) cTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCTAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGGACTGTTCA‑GTTGCCTGCCAGGc < 1:1160407/149‑1 (MQ=255) cAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCaa < 2:1046795/149‑1 (MQ=255) aaTTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAg > 1:1046935/1‑149 (MQ=255) aaTTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAg > 1:1046900/1‑149 (MQ=255) aTTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGa < 1:1046796/149‑1 (MQ=255) ttCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGaa < 2:1046798/149‑1 (MQ=255) cGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAAt < 2:1046800/149‑1 (MQ=255) gCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATa < 2:1046801/149‑1 (MQ=255) aGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAAc < 1:1046805/149‑1 (MQ=255) aGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAAc < 2:1046804/149‑1 (MQ=255) gACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAAcg > 1:1046880/1‑149 (MQ=255) aCCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTTCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAAcgc < 2:1046808/149‑1 (MQ=255) ccGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAAcgcg > 1:1046856/1‑149 (MQ=255) ggAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGa < 1:1046811/147‑1 (MQ=255) aaTCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAgt > 2:1046890/1‑149 (MQ=255) aTCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAgtt > 2:1046875/1‑149 (MQ=255) tCGCAATGCCACATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCAGCAACGACTGCCGATTACGTTCGGCCCTGTTCA‑GTTGACTGCCAGGCCAAGAAAGAACGCGACAgttg > 2:1046955/1‑149 (MQ=255) tCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCGTGCCAGGCCAAGAAATAACGCGACAgttg > 2:1046933/1‑149 (MQ=255) tCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAgttg > 2:1046907/1‑149 (MQ=255) tCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAgttg < 2:1046813/149‑1 (MQ=255) tCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAgttg < 2:1046814/149‑1 (MQ=255) aaaTGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTa < 2:1046816/149‑1 (MQ=255) gCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATgg > 2:1046886/1‑149 (MQ=255) ccAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATggg > 1:1046870/1‑149 (MQ=255) ccAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATggg < 1:1046818/149‑1 (MQ=255) ccAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATggg < 1:1046819/149‑1 (MQ=255) tGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGc < 1:1046823/149‑1 (MQ=255) tATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGATGCCATCAACGACTGACTATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGtt < 1:1046825/144‑1 (MQ=255) tATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTa < 1:1046827/149‑1 (MQ=255) aTCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTaa < 1:1046828/149‑1 (MQ=255) tCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAAc > 1:1046883/1‑149 (MQ=255) aTCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGgc > 2:1046916/1‑149 (MQ=255) aTCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGgc > 1:1046921/1‑149 (MQ=255) aTCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGgc < 2:1046829/149‑1 (MQ=255) tCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGgca > 1:1046970/1‑149 (MQ=255) cACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGgcag > 1:1046868/1‑149 (MQ=255) ccAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGgcagca > 1:1046953/1‑149 (MQ=255) aGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGGTAATGGGTTAGCTAACGGCAGCAac > 2:1046927/1‑149 (MQ=255) gTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAaca > 2:1046978/1‑149 (MQ=255) tGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAAcacc < 1:1046832/149‑1 (MQ=255) gCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAAcacca < 2:1046833/149‑1 (MQ=255) ccaggCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAAcaccac < 2:1046834/146‑1 (MQ=255) ccGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACaccacc > 2:1046887/1‑149 (MQ=255) cGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACAccacca > 1:1046881/1‑149 (MQ=255) cGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGcc < 2:1046836/149‑1 (MQ=255) gTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGccc > 2:1046922/1‑149 (MQ=255) cGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGcc > 1:1046936/1‑149 (MQ=255) cGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGcc > 1:1046924/1‑149 (MQ=255) caccaTCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAg > 1:1046888/1‑143 (MQ=255) caccaTCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAAt < 1:1046839/149‑1 (MQ=255) gcccgcatGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAAt < 1:1046847/143‑1 (MQ=255) accaTCCTGATGGCAAATACGTACACCGCGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAAtt < 2:1046840/149‑1 (MQ=255) accaTCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAAtt < 2:1046843/149‑1 (MQ=255) catcatGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGc < 1:1046844/149‑1 (MQ=255) tcatGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAAcaccac < 1:1046845/129‑1 (MQ=255) tcatGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAAcaccac > 2:1046845/1‑129 (MQ=255) catGATGGCAAATACGTACACCGAGGCCATCAACGACTGCCGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGGTAGCTAACGGCAGCAACACCACCAGCCGCAGGCCACTTGCttt > 2:1046983/1‑149 (MQ=255) atgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAAc > 1:1047008/1‑149 (MQ=255) atgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAAc > 2:1046897/1‑149 (MQ=255) atgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAAc > 2:1046903/1‑149 (MQ=255) tgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGTCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACa < 1:1046850/149‑1 (MQ=255) gCATATACGTACACAGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTTCCTGCCAGGCCAAGAAATAACGCTACAGTTGTTAATGGGGTAGCTAACGGCAGCAACACCAAAATCACCAGGCCAATTGCTTTAAACaaa < 2:1046851/149‑1 (MQ=255) aaaTACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATc < 2:1046853/149‑1 (MQ=255) aaTACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCt > 2:1046894/1‑149 (MQ=255) aaTACGTACACCGAGGCCATCAAAGACTGACGATTACGTTCGGCACTGTTCA‑GTCGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGATAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCt < 2:1046855/149‑1 (MQ=255) aTACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTa < 2:1046856/149‑1 (MQ=255) aTACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTa < 1:1046857/149‑1 (MQ=255) aCGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAAc > 1:1046982/1‑149 (MQ=255) cGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATtggtgg > 2:1046990/1‑149 (MQ=255) gAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTggtggt > 2:1046961/1‑149 (MQ=255) gAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTggtggt > 1:1046930/1‑149 (MQ=255) gAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTggtggt > 1:1046901/1‑149 (MQ=255) atgCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGgtt < 1:1046860/147‑1 (MQ=255) aGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGgtt > 1:1046920/1‑149 (MQ=255) aGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGgtt < 2:1046861/149‑1 (MQ=255) ccATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGgttgtt > 1:1047021/1‑149 (MQ=255) cATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTa > 1:1046959/1‑149 (MQ=255) aaCGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCt < 1:1046864/149‑1 (MQ=255) cGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCtgt > 2:1046979/1‑149 (MQ=255) gACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCtgtg > 1:1046911/1‑149 (MQ=255) gACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCtgtg < 2:1046865/149‑1 (MQ=255) tGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTAt > 1:1046963/1‑149 (MQ=255) cGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACTCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTg < 2:1046867/149‑1 (MQ=255) gATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTgg < 2:1046869/149‑1 (MQ=255) gATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTgg > 1:1047000/1‑149 (MQ=255) aTTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTggg > 2:1046939/1‑149 (MQ=255) ttCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCa < 2:1046870/149‑1 (MQ=255) tCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCa < 1:1046872/148‑1 (MQ=255) cGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGc < 2:1046873/149‑1 (MQ=255) cACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGaa < 1:1046874/149‑1 (MQ=255) aCTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGaaa > 1:1046941/1‑149 (MQ=255) cagaTGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGt < 2:2849321/146‑1 (MQ=255) | TTAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAGT > U00096/1618662‑1618950 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |