Read alignment evidence...
  seq id position ref new freq score (cons/poly) reads annotation genes product
*U000961,552,1910CA25.7% 241.4 / 23.1 109intergenic (+200/+207)fdnI/yddMformate dehydrogenase N subunit gamma/DNA‑binding transcriptional regulator YddM
Reads supporting (aligned to +/- strand):  ref base C (23/58);  new base A (24/4);  total (47/62)
Fisher's exact test for biased strand distribution p-value = 1.22e-07
Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00
Rejected as consensus: Frequency below/above cutoff threshold.

Only 100 of 111 total aligned reads displayed.

TATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCA  >  U00096/1552043‑1552339
                                                                                                                                                    |                                                                                                                                                    
tatTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTc                                                                                                                                                      <  2:1003133/149‑1 (MQ=31)
 atTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCa                                                                                                                                                     <  2:1003135/149‑1 (MQ=32)
   tGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCaaa                                                                                                                                                   <  1:1003136/149‑1 (MQ=33)
    gTAGTCATCGTAGGCTTTGTTCATGGCGGATGCGGCGTTAACGCCTTATCCGGCATGATAAGCCTTCATTTCCTATAGATTGGTGTGATCGTGTTGGCCTGATTAGCGTTGCGGATCTGGCAATGTTGCGTTTGTCATCAGTTTCAAAt                                                                                                                                                  <  1:1003137/149‑1 (MQ=11)
       gACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGgc                                                                                                                                               <  1:1003138/149‑1 (MQ=34)
        aCAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGgcg                                                                                                                                              <  2:1003139/149‑1 (MQ=34)
          aaCGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCt                                                                                                                                            <  2:1003140/149‑1 (MQ=34)
           aCGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTg                                                                                                                                           <  1:1003141/149‑1 (MQ=35)
           aCGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTg                                                                                                                                           <  1:1003142/149‑1 (MQ=35)
           aCGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTg                                                                                                                                           <  1:1003143/149‑1 (MQ=35)
            cGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGt                                                                                                                                          <  1:1003145/149‑1 (MQ=35)
             gTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTa                                                                                                                                         <  2:1003146/149‑1 (MQ=37)
               aGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaaa                                                                                                                                       <  2:1003147/149‑1 (MQ=38)
                ggCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTaaaa                                                                                                                                      <  2:1003148/149‑1 (MQ=39)
                  cTTTGTTCATGCCGTATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCTAATCCAATAGATTGCAGTGCACGTGTAGGCCTGATAATCGTAGCGCATCAGTCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAgg                                                                                                                                    <  1:1003149/149‑1 (MQ=14)
                   tttGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCATTGAACGTGTAGGCCTGATAAGCGTTGCGCATCAGGCAATGTTGCGTTTGTAATCAGTTTCTAATGGCGCTGTAAAAGGc                                                                                                                                   <  2:1003151/149‑1 (MQ=255)
                     tGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCg                                                                                                                                  >  1:1003200/1‑148 (MQ=255)
                      gtgcATGCCGGATGCGGCGGGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGGAGGCCTGATAAGCGGAGCGCATCAGGCAATGTTGCGTGTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTc                                                                                                                                <  2:1003152/146‑1 (MQ=14)
                         cATGCCGGATGCGGCGTGAACGCCTTATCATGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGGTTAGGCCTGATATGCGTAGCGCATCAGTCAATGTTTCGTGTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAtt                                                                                                                             <  2:1003153/149‑1 (MQ=14)
                          aTGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAttt                                                                                                                            <  2:1003155/149‑1 (MQ=255)
                          aTGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAttc                                                                                                                            <  2:1003154/149‑2 (MQ=255)
                           tGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGTGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCAtttt                                                                                                                           <  1:1003156/149‑1 (MQ=255)
                             ccGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCa                                                                                                                         <  1:1003158/149‑1 (MQ=255)
                             ccGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTGTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCa                                                                                                                         <  2:1003157/149‑1 (MQ=255)
                              cGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCat                                                                                                                        >  1:1003289/1‑149 (MQ=255)
                                   gcggcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGt                                                                                                                   <  2:1003161/149‑1 (MQ=255)
                                    cggcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTa                                                                                                                  <  2:1003162/149‑1 (MQ=255)
                                    cggactGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATAtt                                                                                                                     <  1:1192996/141‑1 (MQ=255)
                                      gcgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGa                                                                                                                <  2:1003163/149‑1 (MQ=255)
                                       cgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAg                                                                                                                 <  1:1003165/147‑1 (MQ=255)
                                       cgTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGAc                                                                                                               <  1:1003164/149‑1 (MQ=255)
                                        gTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACa                                                                                                              <  1:1003166/149‑1 (MQ=255)
                                         tGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAg                                                                                                                 <  1:1003168/145‑1 (MQ=255)
                                         tGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACaa                                                                                                             <  2:1003167/149‑1 (MQ=255)
                                           aaCGCCTTATCCTGCATGAAAACCCTTCAACTCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGGCATTTTCa                                                                                                                         <  1:1003169/135‑1 (MQ=255)
                                           aaCGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACg                                                                                                           <  2:1003170/149‑1 (MQ=255)
                                             cGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTa                                                                                                         <  1:1003171/149‑1 (MQ=255)
                                             cGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTa                                                                                                         <  2:1003172/149‑1 (MQ=255)
                                                    tCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTATAAGGAGACATTTTAATATTGTACACAACGTAGTCTTTg                                                                                                  >  2:1003250/1‑149 (MQ=14)
                                                     ccGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGTCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGGCATTTTCATATTGTAGACAACGTAGGCTTTGt                                                                                                 <  1:1003173/149‑1 (MQ=255)
                                                        gCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCa                                                                                              <  2:1003174/149‑1 (MQ=255)
                                                           tGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGACATTTTAATATTGTAGAAAGCGAATGCTTTGTTCAttc                                                                                           >  2:1003270/1‑147 (MQ=17)
                                                             aaaaCCCTTCTAATCCATTAGATTGCAGTGAAAGTGTAGGCATGATATGCGTAGCTCATGATTTAATGTTTATTTTTTTTTAAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCg                                                                                         <  2:1003175/149‑1 (MQ=18)
                                                               aaCCCTTGATATTCTATATATTGAAGTGTAAGTTTAGTAATTATATTCGTATCTCTTCAGTCAATGTTGCGTTTTTCATCAGTTTCAAATGGCGCTGTATAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGa                                                                                       <  2:1003205/149‑1 (MQ=12)
                                                               aaCCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGa                                                                                       <  2:1003176/149‑1 (MQ=255)
                                                                aCCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGa                                                                                       <  1:1003177/148‑1 (MQ=255)
                                                                  ccTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTAAAAGGAGACATTTTAATATTGTATAAACCGAAGGATTTGTTCATGCAGGATgc                                                                                    >  2:1003252/1‑149 (MQ=17)
                                                                   cTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTATGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATgcg                                                                                   >  2:2206050/1‑149 (MQ=255)
                                                                     tCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTAATATTGAAGACAGCGTAGGCTTTGTTCATGCCGGATgcggc                                                                                 >  2:1003283/1‑149 (MQ=21)
                                                                     tCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTAAAAAGCGACATTTTAATATTGTATACAAAATAGGCTATGTTCATGCAGGATgcgtc                                                                                 >  2:1003293/1‑147 (MQ=17)
                                                                          tCCTATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGaa                                                                            <  2:1003180/149‑1 (MQ=255)
                                                                          tCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGaa                                                                            >  2:1003302/1‑149 (MQ=255)
                                                                           ccAATAGATTGCAGTGTACGTGTAGGCATGATAAGCGTAGCGCATGAGGCAATGTTTCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAAc                                                                           <  2:1003181/149‑1 (MQ=255)
                                                                            cAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACg                                                                          >  1:1003221/1‑149 (MQ=255)
                                                                             aaTAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGAGTCAtttt                                                                                                                           >  1:1003323/1‑99 (MQ=255)
                                                                               tAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGAAGACAACGTAGGCTTTGTTCATGCCGGAGGCGTCGTGAAccaca                                                                       >  2:1003340/1‑145 (MQ=255)
                                                                               tAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTAAAAGGAGGCATTTTAATATTCTAGACAACGTAGGCTTTGTTAATGCCGGATGAGTCGTGGAAGccg                                                                       >  2:1003292/1‑148 (MQ=18)
                                                                                     gCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTAATATTGTATACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTTAACGACTTATACg                                                                 >  2:1003334/1‑149 (MQ=25)
                                                                                       aGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGc                                                               <  2:1003184/149‑1 (MQ=255)
                                                                                       aGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTATAAGGAGACATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCACGAAGCGGCGTGAACGCCTGATGCGGc                                                               >  2:1003297/1‑149 (MQ=21)
                                                                                        gTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCa                                                              <  2:1003186/149‑1 (MQ=255)
                                                                                        gTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCa                                                              <  1:1003185/149‑1 (MQ=255)
                                                                                         tGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTa                                                                                                                                         >  1:1003295/1‑73 (MQ=255)
                                                                                          gAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTATAAGGAGACATTTTATTATTGAGTACACCGAAGGCTTTGTTCATGCCGGAAGCGGCGTGAACGCCTTATCCGGAATg                                                            >  2:1003298/1‑149 (MQ=17)
                                                                                           aaCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTAAAAAGCGACATTTTAATATTGGAGACCACGACGGCTTAGTTCATGCCGGAAGCTGCGTGCACGACTAAGCAGGCaggc                                                           >  2:1003365/1‑146 (MQ=17)
                                                                                            aCGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGaa                                                          <  2:1003187/149‑1 (MQ=255)
                                                                                             cGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTg                                                                                                                    >  1:1003254/1‑90 (MQ=255)
                                                                                              gtgtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGaaaa                                                        <  2:2619718/149‑1 (MQ=255)
                                                                                               tgtAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAAc                                                       <  2:1003189/149‑1 (MQ=255)
                                                                                                 tAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAAccc                                                     >  1:1003312/1‑149 (MQ=255)
                                                                                                 tAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAAccc                                                     <  2:1003190/149‑1 (MQ=255)
                                                                                                     ccTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATc                                                                   >  1:1003194/1‑131 (MQ=255)
                                                                                                     ccTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATc                                                                   <  2:1003194/131‑1 (MQ=255)
                                                                                                      cTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATc                                                                   <  2:1003193/130‑1 (MQ=255)
                                                                                                       tGATAAGCGTAACGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCaaa                                               >  2:2653877/1‑149 (MQ=255)
                                                                                                        gATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAAt                                              >  1:1003196/1‑149 (MQ=255)
                                                                                                             gCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTCATATTGTAGACACCGTCGGCTTTGTTCATGCCGGAGGCGGCTTGAACCGCAGATCGGGCATGAAAACCCGTGAAGGCCAAt                                         >  1:1003359/1‑149 (MQ=25)
                                                                                                                  gcgcATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGAtt                                    <  2:1003200/149‑1 (MQ=255)
                                                                                                                      aTCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGGGTCATTTTAATATTGTAGCCAACGTAGGATTTGTTCATGACGGATGCGGCGAGAGCGCGTGAGCCGGAAAGAAAACACTTCAAATCCATTAGATTGCAg                                >  2:1003317/1‑149 (MQ=25)
                                                                                                                       tCAGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTATAAGGAGGCAtttt                                                                                                                           >  1:1003319/1‑57 (MQ=14)
                                                                                                                       tCAGGCAATGTTGCGTTTGTCATCAGTTAAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACACCGTAGGCTTTGTTCATGCCGGAAGCGGCGTGAACGACTTATCCGGCATGAAAACCCTACAAATCCAATAGATTGCaat                               >  2:1003321/1‑147 (MQ=17)
                                                                                                                         aGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCt                                                                                                                                            >  1:1003316/1‑38 (MQ=255)
                                                                                                                         aGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCt                                                                                                                                            >  1:1003304/1‑38 (MQ=255)
                                                                                                                         aGGCAATGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGCGACAtttt                                                                                                                           >  1:1003322/1‑55 (MQ=18)
                                                                                                                             aaTGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACgt                         >  1:1003204/1‑149 (MQ=255)
                                                                                                                             aaTGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTAATATTg                                                                                                                    >  1:1003364/1‑58 (MQ=255)
                                                                                                                             aaTGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTCATATTGTAGACAACGAAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAACGCCATTCAAATCAAATAGATTGCAGTGAACgt                         >  2:1003256/1‑149 (MQ=17)
                                                                                                                              aTGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGCCCgtg                        >  1:1003353/1‑149 (MQ=255)
                                                                                                                              aTGTTGCGTTTGTCATCAGTTTAAAATGGCGCTGTAAAAGGAGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCCGAAGAGGCGTGAAAGACAAAAACGCCATGAAAACCCTTAAAAACCAATAAATTGCAGTTAACttg                        >  2:1003328/1‑149 (MQ=14)
                                                                                                                                      tttGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTg                >  1:1003247/1‑149 (MQ=255)
                                                                                                                                       ttGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGa               >  2:1003264/1‑149 (MQ=255)
                                                                                                                                         gTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATTCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAAACCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATa             >  2:1003279/1‑149 (MQ=255)
                                                                                                                                             tcaGTTTCAACTGGCGCTGTAAAAGGCGTCATTTTCa                                                                                                                         <  1:1003208/37‑1 (MQ=255)
                                                                                                                                             tcaGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCg         >  2:1003318/1‑149 (MQ=38)
                                                                                                                                             tcaGCTTAAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCTGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCg         <  2:1003207/149‑1 (MQ=9)
                                                                                                                                              caGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGt        >  1:1003305/1‑149 (MQ=38)
                                                                                                                                                  ttCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAgcg    >  2:1003376/1‑149 (MQ=34)
                                                                                                                                                  ttCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAgcg    >  2:1003377/1‑149 (MQ=34)
                                                                                                                                                  ttCAAATGGCGCTGTAAAAGGCGGCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGcc                  <  1:1003211/135‑1 (MQ=17)
                                                                                                                                                   tCAAATGGCGCTGTAAAAGGCTTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGAGTAgcgc   >  1:1003335/1‑149 (MQ=18)
                                                                                                                                                    |                                                                                                                                                    
TATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCATCAGGCAATGTTGCGTTTGTCATCAGTTTCAAATGGCGCTGTAAAAGGCGTCATTTTCATATTGTAGACAACGTAGGCTTTGTTCATGCCGGATGCGGCGTGAACGCCTTATCCGGCATGAAAACCCTTCAAATCCAATAGATTGCAGTGAACGTGTAGGCCTGATAAGCGTAGCGCA  >  U00096/1552043‑1552339

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑