| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | U00096 | 1,618,806 | Δ1 bp | coding (103/666 nt) | marC ← | inner membrane protein MarC |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | U00096 | 1,618,806 | 0 | T | . | 99.5% | 1003.1 / ‑2.6 | 211 | coding (103/666 nt) | marC | inner membrane protein MarC |
| Reads supporting (aligned to +/- strand): ref base T (0/1); new base . (94/115); total (95/116) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 1.00e+00 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 211 total aligned reads displayed.
TTAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAG > U00096/1618662‑1618949 | ttAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTtgc < 1:1131217/149‑1 (MQ=255)ttAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTtgc < 2:1131218/149‑1 (MQ=255) aGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTtgcctg > 2:1131335/1‑149 (MQ=255) ccgccTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTtgcctgcc < 2:1131220/149‑1 (MQ=255) gccTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAg > 1:1131302/1‑149 (MQ=255) gccTACAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAg < 1:1131222/149‑1 (MQ=255) aaTTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAg > 1:1131374/1‑149 (MQ=255) aTTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCa > 1:1131320/1‑146 (MQ=255) tCGCCGACCGGGCATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACAATCATGATGGCAAATACGTACACCGAGGCCATCAACGCCTGACGAGTACGGTCGGCACTGGTC‑CGTTGCCTGCCCGGCCAAGaaa > 2:1131314/1‑149 (MQ=255) cGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAAt < 2:1131225/149‑1 (MQ=255) cGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAAt < 1:1131226/149‑1 (MQ=255) gCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCACCGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATa > 1:1131352/1‑149 (MQ=255) gCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATa < 2:1131228/149‑1 (MQ=255) cAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATaa < 1:1131230/149‑1 (MQ=255) ggAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACa > 1:1502608/1‑149 (MQ=255) gAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAg > 2:1131368/1‑149 (MQ=255) aaTCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAgt > 2:1131317/1‑149 (MQ=255) aTCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAgtt < 2:1131233/149‑1 (MQ=255) aTCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAgtt > 1:1131310/1‑149 (MQ=255) aaaTGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTa < 1:1131236/149‑1 (MQ=255) aaTGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTaa > 1:1131246/1‑149 (MQ=255) aaTGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTa < 1:1131238/148‑1 (MQ=255) aaTGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGAAGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTaa > 1:1131342/1‑149 (MQ=255) aTGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAAt < 2:1131240/149‑1 (MQ=255) tGCCAAATGTATCCATCACCAGTTGCCCGGCGTATTACGCCACCATCATGATGGCAATTACGTACCCCGAGGGCAGCAACGACTGAGGAGTACGTTCGGCACTGTTCA‑GTTGCCTGCGAGGCCAAGAAGTAACGCGACAGGTGTTAATg > 2:1131405/1‑149 (MQ=255) tGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATg < 1:1131244/149‑1 (MQ=255) tGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATg < 1:1131242/149‑1 (MQ=255) ccAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATggg > 1:1131297/1‑149 (MQ=255) aaaTGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGtt > 2:1131363/1‑149 (MQ=255) aaTGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATGACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTa > 1:1131359/1‑149 (MQ=255) tATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTa < 2:1131248/149‑1 (MQ=255) aTCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTaa < 1:1131249/149‑1 (MQ=255) aTCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGgc > 2:1131373/1‑149 (MQ=255) tCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGgca < 2:1131252/149‑1 (MQ=255) aCCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGgc > 2:1131354/1‑146 (MQ=255) cAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCaa < 2:1131255/149‑1 (MQ=255) gTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAaca < 2:1131257/149‑1 (MQ=255) gCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAAcacca < 1:1131259/149‑1 (MQ=255) cccGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAAcaccac < 2:1131260/149‑1 (MQ=255) cGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACAccccca > 2:1131400/1‑149 (MQ=255) ggCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAg > 1:1131348/1‑149 (MQ=255) gCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAAcaccac < 1:1131262/145‑1 (MQ=255) gCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAg > 1:1131331/1‑148 (MQ=255) gCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGc > 2:1131357/1‑149 (MQ=255) aaTACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGcc > 1:1131410/1‑146 (MQ=255) aaTACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCa < 2:1131264/149‑1 (MQ=255) aTACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAg < 1:1131266/149‑1 (MQ=255) aTACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAg < 2:1131268/149‑1 (MQ=255) tACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAgg < 2:1131270/149‑1 (MQ=255) aCGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTCGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGc < 1:1131272/149‑1 (MQ=255) gCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCa > 1:1131449/1‑149 (MQ=255) gCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCa > 2:1131343/1‑149 (MQ=255) gCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCa > 1:1131381/1‑149 (MQ=255) ccaccaTCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCaa > 1:1131333/1‑149 (MQ=255) accaTCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAAtt < 1:1131280/149‑1 (MQ=255) accaTCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAAtt < 1:1131278/149‑1 (MQ=255) accaGCATGAGGGCAAATACGTCGACCGCGGCCCGCAACGACTGACGATTACGTTCGGCACTGTTCA‑GGTGCCTGCCAGGCCAAGAACTAACGCGACAGTTGTTACTGGGGTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAAt < 1:1131276/148‑1 (MQ=255) catcatGATCGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATTGGTTAGCTAAAGGCTGCAACACCACCAGCCCCAGGCCAATTGc < 2:1131281/149‑1 (MQ=255) catGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCCGGCCAATTGCttt < 1:1131283/149‑1 (MQ=255) catGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCttt < 2:1131284/149‑1 (MQ=255) tgatgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTaa < 1:1131287/149‑1 (MQ=255) tgatgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTaa < 2:1131288/149‑1 (MQ=255) atgGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAAc < 2:1131290/149‑1 (MQ=255) ggCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACaa < 2:1131292/149‑1 (MQ=255) gCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACaaa > 2:1131413/1‑149 (MQ=255) gCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGGTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACaaa < 1:1131295/149‑1 (MQ=255) cAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAAt < 2:1131298/149‑1 (MQ=255) aaaTACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATc < 2:1131301/149‑1 (MQ=255) aaTACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCt > 2:1131376/1‑149 (MQ=255) tACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTaa > 2:1131430/1‑149 (MQ=255) aCGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAAc < 2:1131303/149‑1 (MQ=255) gTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACAt < 2:1131305/149‑1 (MQ=255) tACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACAtt < 1:1131306/149‑1 (MQ=255) tACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACAtt > 1:1131462/1‑149 (MQ=255) acCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATtggt > 2:1131379/1‑149 (MQ=255) ccGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATtggtg < 2:1131309/149‑1 (MQ=255) aGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGgtt < 2:1131311/149‑1 (MQ=255) aGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGgtt > 1:1131401/1‑149 (MQ=255) cATCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTa > 1:1131364/1‑149 (MQ=255) aTCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTAt > 1:1131404/1‑149 (MQ=255) tCAACGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCACAGGCCAATTGCTTTAAACAAATCTAACATTGGTGgttgtt > 1:1131425/1‑146 (MQ=255) aaCGACTGACGATTACGCTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACGACCAGCCCCAGGCCAATTGCTTTTAACAAATCTAACATTGGTGGTTGTTATCCt < 1:1131313/149‑1 (MQ=255) cGACTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATcc < 1:1131315/146‑1 (MQ=255) aCTGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTgtgt > 1:1131386/1‑149 (MQ=255) cTGCCGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTa > 2:1131391/1‑149 (MQ=255) tGACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTAt < 1:1131317/149‑1 (MQ=255) gACGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATc > 2:1131325/1‑149 (MQ=255) cGATTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTg < 2:1131319/149‑1 (MQ=255) aTTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGCCAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTggg > 2:1131476/1‑149 (MQ=255) aTTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTggg > 1:1131437/1‑149 (MQ=255) aTTACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTggg < 2:1131321/149‑1 (MQ=255) ttACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGt > 2:1131453/1‑149 (MQ=255) ttACGTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCACCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGt > 2:1131394/1‑149 (MQ=255) gTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATc < 1:1131325/149‑1 (MQ=255) gTTCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGGTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATc < 2:1131323/149‑1 (MQ=255) ttCGGCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCa > 2:1131426/1‑149 (MQ=255) gCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGa > 1:1131419/1‑149 (MQ=255) gCACTGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCACCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGa < 2:1131327/149‑1 (MQ=255) cACTGTTCAT‑TTGCCTGCCAGGCCAAGAAATAACGCGACAGTTCTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGaa < 1:1131328/149‑1 (MQ=255) tGTTCA‑GTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAg > 1:1131395/1‑149 (MQ=255) | TTAAGCCGCCTGCAATTCGCAGACCGGGAATCGAAATGCCAAATGTATCCATCACCAGTTGCCCGGCGTAATACGCCACCATCATGATGGCAAATACGTACACCGAGGCCATCAACGACTGACGATTACGTTCGGCACTGTTCATGTTGCCTGCCAGGCCAAGAAATAACGCGACAGTTGTTAATGGGTTAGCTAACGGCAGCAACACCACCAGCCCCAGGCCAATTGCTTTAAACAAATCTAACATTGGTGGTTGTTATCCTGTGTATCTGGGTTATCAGCGAAAAG > U00096/1618662‑1618949 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |