| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | U00096 | 4,635,170 | +G | coding (141/870 nt) | rob ← | DNA‑binding transcriptional dual regulator Rob |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | U00096 | 4,635,168 | 1 | . | G | 99.4% | 696.1 / ‑3.8 | 180 | coding (143/870 nt) | rob | DNA‑binding transcriptional dual regulator Rob |
| Reads supporting (aligned to +/- strand): ref base . (0/1); new base G (94/85); total (94/86) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 4.78e-01 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
Only 100 of 190 total aligned reads displayed.
GGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑GGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCA > U00096/4635020‑4635309 | ggCAAACTGCTTCTTGAATGCGCGGTTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑t < 2:3440127/149‑1 (MQ=255) aaaCTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑ggg < 1:3440128/149‑2 (MQ=255) cTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑gggcca < 2:3440130/149‑5 (MQ=255) tGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑gggccag > 1:3440196/1‑144 (MQ=255) tGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑gggccag > 1:3440173/1‑144 (MQ=255) gCTTCTTGAATGCGCGGGTAAATTTCTGTTGAGAGGCGAAGCGGTATTGCTGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGTCTAGCTCGAATATACGCGCCAATAGCA‑TGGGCCAGt < 1:3440131/149‑1 (MQ=255) gCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGt > 2:3440148/1‑149 (MQ=255) gCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGt > 1:3440187/1‑149 (MQ=255) cttGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACa < 1:3440133/149‑1 (MQ=255) cttGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACa > 2:3440273/1‑149 (MQ=255) tGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGAc < 1:3440135/146‑1 (MQ=255) aaTGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCtt < 2:3440138/149‑1 (MQ=255) aaTGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCtt > 2:3440279/1‑149 (MQ=255) aTGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCttt < 1:3440139/149‑1 (MQ=255) cgGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATCCGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACa < 2:3440141/149‑1 (MQ=255) gggTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATATCA‑TGGGCCAGTGACATCTTTAAACa > 1:3440230/1‑148 (MQ=255) gTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAAc < 1:3440144/145‑1 (MQ=255) gTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATtc > 1:3440215/1‑149 (MQ=255) gTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATtc > 1:3440219/1‑149 (MQ=255) aaaTGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATtctc > 2:3440209/1‑149 (MQ=255) aaaTGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATtct > 1:3440222/1‑148 (MQ=255) aaTGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTctct < 2:3440147/149‑1 (MQ=255) aaTGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTctct < 1:3440148/149‑1 (MQ=255) tGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGCCATCTTTAAACATTCTCTGt > 2:3440286/1‑149 (MQ=255) tCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTaa > 2:3440270/1‑149 (MQ=255) tCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTaa > 1:3440295/1‑149 (MQ=255) cTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGGCCAGAAGCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTctct < 1:3440151/144‑1 (MQ=255) tGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGt < 2:3440152/149‑1 (MQ=255) agTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGGCAGGCGTAGTGCGAACGCCGATTTCGACAAACGACGAGCCCGCAGATACGCGCCAATAGCA‑TGGGCCCGGGACATCTTTAAACATTCTCTGTAAGTGCCACtt > 2:3440261/1‑149 (MQ=255) gTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTg > 1:3440245/1‑149 (MQ=255) gTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCATTAAACATTCTCTGTAAGTGCCACTTg > 2:3440340/1‑149 (MQ=255) tCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCCCTTgg > 2:3440155/1‑149 (MQ=255) gAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGTCGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGaa > 2:3440198/1‑149 (MQ=255) gAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGaa > 1:3440252/1‑149 (MQ=255) gAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGaa < 2:3440158/149‑1 (MQ=255) aGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAAt > 1:3440309/1‑148 (MQ=255) gCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATaa < 1:3440159/149‑1 (MQ=255) gCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATaa > 2:3440312/1‑149 (MQ=255) gCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATa > 1:3440248/1‑148 (MQ=255) cGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAAc < 1:3440161/149‑1 (MQ=255) cGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAAc > 1:3440288/1‑149 (MQ=255) gTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAAc < 1:3440163/147‑1 (MQ=255) gTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCt > 1:3440319/1‑149 (MQ=255) gTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCt > 2:3440218/1‑149 (MQ=255) tATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTg > 1:3440324/1‑149 (MQ=255) cAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTc < 1:3440165/149‑1 (MQ=255) aGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTcg > 1:3440285/1‑149 (MQ=255) cgATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTcgccgc > 1:3440221/1‑149 (MQ=255) cgATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTcgccgc < 2:3440166/149‑1 (MQ=255) aTGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCATT‑GGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTa < 1:3440168/149‑1 (MQ=255) cAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTg > 1:3440243/1‑149 (MQ=255) cAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTg < 2:3440170/149‑1 (MQ=255) aGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGt < 2:3440173/149‑1 (MQ=255) aGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGt > 1:3440318/1‑149 (MQ=255) aTCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGATCACGAATATACGCGCCAATATCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGa < 1:3440175/149‑1 (MQ=255) tCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAg > 1:3440275/1‑149 (MQ=255) cgcgCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACCCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACa > 1:3440280/1‑149 (MQ=255) tcAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAggg > 2:3440237/2‑149 (MQ=255) aGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTGCATTGTCGAGCGACAGGGGc < 2:3440181/149‑1 (MQ=255) gTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCt > 1:3440179/1‑149 (MQ=255) tCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTACGTGCCACTAGGAATAACCTGCATTCGCCGCTACATTGTCGAGCGACAGGGGCTg > 2:3440348/1‑149 (MQ=255) ggCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATc < 1:3440182/149‑1 (MQ=255) ggCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATc > 1:3440303/1‑149 (MQ=255) gCGTAGTGCGACGGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATcc < 2:3440185/149‑1 (MQ=255) gCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATcc > 2:3440308/1‑149 (MQ=255) gCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATcc < 1:3440184/149‑1 (MQ=255) gCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGAGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATcc > 1:3440316/1‑149 (MQ=255) gTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATg > 1:3440265/1‑149 (MQ=255) gTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATg < 2:3440188/149‑1 (MQ=255) tGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGa < 2:3440189/149‑1 (MQ=255) tGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTAAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGa > 2:3440266/1‑149 (MQ=255) gCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGAc > 2:3440355/1‑149 (MQ=255) gACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCt > 1:3440373/1‑149 (MQ=255) gACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGACAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCAACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGATCGACAGGGGCTGATCCAGATGAc > 1:3440331/1‑147 (MQ=255) aCCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCtt > 1:3440382/1‑149 (MQ=255) gATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTccagcc > 1:3440262/1‑149 (MQ=255) tttCGACAAACGACGAGCACCAATATAAGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCAGTAAGTGCAACTTGGAATAACCTGCTTTCGACGCTACATTGTCGAGCGACAGGGGATGATACAGATGACCTTccggccag > 1:3440192/1‑149 (MQ=255) ttCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGa < 2:3440195/149‑1 (MQ=255) ttCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGa < 1:3440194/149‑1 (MQ=255) aCAAACGTCGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTaa < 1:3440198/149‑1 (MQ=255) aaaCGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTcca > 2:3440200/1‑137 (MQ=255) aaaCGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTaaaa < 2:3440202/149‑1 (MQ=255) aaCGACGAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAg < 1:3440203/149‑1 (MQ=255) acgacgAGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAgg < 1:3440206/149‑1 (MQ=255) cgccgaGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGt < 2:3440207/146‑1 (MQ=255) gaGCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTcgcg < 1:3440209/149‑1 (MQ=255) gCACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaa < 2:3440212/149‑1 (MQ=255) cACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaat < 2:3440215/149‑1 (MQ=255) cACGAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaat < 1:3440213/149‑1 (MQ=255) gAATATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGaataat > 2:3440302/1‑149 (MQ=255) aaTATACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATg < 1:3440217/149‑1 (MQ=255) atatACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGc < 2:3440219/149‑1 (MQ=255) atatACGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGc > 2:3440378/1‑149 (MQ=255) taCGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCgg < 2:3440222/149‑1 (MQ=255) aCGCGCCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATg > 1:3440300/1‑144 (MQ=255) gcgcCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCt < 2:3440224/149‑1 (MQ=255) gcgcCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCt > 2:3440291/1‑149 (MQ=255) gcCAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGa < 1:3440226/149‑1 (MQ=255) cAATAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATc > 2:3440328/1‑149 (MQ=255) aaTAGCA‑TGGGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGCGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAGGGTCGCGAATAATGCCGGCCTGATc > 1:3440293/1‑148 (MQ=255) | GGCAAACTGCTTCTTGAATGCGCGGGTAAATGTCTGTTGAGAGTCGAAGCGGTATTGCAGCGCGATGTCCAGAATCGGACGCGCAGTCAGGCGTAGTGCGACCGCCGATTTCGACAAACGACGAGCACGAATATACGCGCCAATAGCA‑T‑GGCCAGTGACATCTTTAAACATTCTCTGTAAGTGCCACTTGGAATAACCTGCTTTCGCCGCTACATTGTCGAGCGACAGGGGCTGATCCAGATGACCTTCCAGCCAGATTAAAAGGTCGCGAATAATGCCGGCCTGATCCA > U00096/4635020‑4635309 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 14 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |